RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 MRPL44Q9H9J2 332 aaKnown RBP12.59□□□□□ -0.39
TOP3A-217ENST00000584582 ARFGAP3Q9NP61 516 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 ST7Q9NRC1 585 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 PCDHB13Q9Y5F0 798 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 NPHP3-ACAD11A0A0J9YXS1 232 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 PDHBP11177 359 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 CYLC1P35663 651 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-217ENST00000584582 CHMP4BP1P59074 171 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 GPS2Q13227 327 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 DLGAP5Q15398 846 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 PHRF1Q9P1Y6 1649 aaKnown RBP12.59□□□□□ -0.39
TOP3A-217ENST00000584582 RAD9BQ6WBX8 426 aa12.59□□□□□ -0.39
TOP3A-217ENST00000584582 EPN1Q9Y6I3 576 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-217ENST00000584582 TTC26A0AVF1 554 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 H7C1D1 291 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 SRGAP2O75044 1071 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 CXCR5P32302 372 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 PMS1P54277 932 aaKnown RBP12.58□□□□□ -0.4
TOP3A-217ENST00000584582 FUT2Q10981 343 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 CDC37Q16543 378 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-217ENST00000584582 IL17AQ16552 155 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 WDR78Q5VTH9 848 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 TAF3Q5VWG9 929 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 NEK11Q8NG66 645 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 ZNF277Q9NRM2 450 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-217ENST00000584582 INTS13Q9NVM9 706 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-217ENST00000584582 BCS1LQ9Y276 419 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 ZNF142P52746 1687 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-217ENST00000584582 GPR75-ASB3A0A0A6YYF3 556 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 POTEB3A0JP26 581 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 TMCO5BA8MYB1 307 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 POTECB2RU33 542 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 BUB1O43683 1085 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 SLC37A4O43826 429 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 ECE2O60344 883 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 NPR1P16066 1061 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 POTEBQ6S5H4 581 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 GOLGA1Q92805 767 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 PPP1R3GB7ZBB8 358 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 USO1O60763 962 aaKnown RBP12.58□□□□□ -0.4
TOP3A-217ENST00000584582 BMS1Q14692 1282 aaKnown RBP12.58□□□□□ -0.4
TOP3A-217ENST00000584582 QRICH1Q2TAL8 776 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 KRT26Q7Z3Y9 468 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 TMTC1Q8IUR5 882 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 PIGOQ8TEQ8 1089 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 DDX12PQ92771 950 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 P2RX5Q93086 422 aa12.58□□□□□ -0.4
TOP3A-217ENST00000584582 MFAP3LO75121 409 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 PRPF4BQ13523 1007 aaKnown RBP12.57□□□□□ -0.4
TOP3A-217ENST00000584582 FBXO11Q86XK2 927 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 CCDC155Q8N6L0 562 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 JAKMIP2Q96AA8 810 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 MTA3Q9BTC8 594 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 PANK4Q9NVE7 773 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 CLIC2O15247 247 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 MYCLP12524 364 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-217ENST00000584582 ANKRD40Q6AI12 368 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 NSMFQ6X4W1 530 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 C16orf86Q6ZW13 317 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 HDAC6Q9UBN7 1215 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 RWDD2AQ9UIY3 292 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-217ENST00000584582 COL1A1P02452 1464 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-217ENST00000584582 POTEFA5A3E0 1075 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 F5H6K3 240 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 KRT86O43790 486 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 GCNT3O95395 438 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 POTEIP0CG38 1075 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 RCAN1P53805 252 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 KLRC3Q07444 240 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 ASPRV1Q53RT3 343 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 ZFYVE27Q5T4F4 411 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 ARL6IP4Q66PJ3 421 aaKnown RBP12.57□□□□□ -0.4
TOP3A-217ENST00000584582 POTEGQ6S5H5 508 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 POTEEQ6S8J3 1075 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 CERS5Q8N5B7 392 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 NAPGQ99747 312 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-217ENST00000584582 RABEP2Q9H5N1 569 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 AGPAT5Q9NUQ2 364 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 STRCP1A6NGW2 1772 aa12.57□□□□□ -0.4
TOP3A-217ENST00000584582 FGFR1OPO95684 399 aaKnown RBP12.56□□□□□ -0.4
TOP3A-217ENST00000584582 MAPK8IP2Q13387 824 aaPredicted RBP12.56□□□□□ -0.4
TOP3A-217ENST00000584582 FAM26FQ5R3K3 315 aa12.56□□□□□ -0.4
TOP3A-217ENST00000584582 CCDC65Q8IXS2 484 aa12.56□□□□□ -0.4
TOP3A-217ENST00000584582 ERMNQ8TAM6 284 aa12.56□□□□□ -0.4
TOP3A-217ENST00000584582 MASTLQ96GX5 879 aa12.56□□□□□ -0.4
TOP3A-217ENST00000584582 STK32BQ9NY57 414 aa12.56□□□□□ -0.4
TOP3A-217ENST00000584582 ADD3Q9UEY8 706 aaKnown RBP12.56□□□□□ -0.4
TOP3A-217ENST00000584582 ATP6V0A2Q9Y487 856 aa12.56□□□□□ -0.4
TOP3A-217ENST00000584582 DDTLA6NHG4 134 aaPredicted RBP12.56□□□□□ -0.4
TOP3A-217ENST00000584582 MDM2Q00987 491 aaPredicted RBP12.56□□□□□ -0.4
TOP3A-217ENST00000584582 PI4KBQ9UBF8 816 aa12.56□□□□□ -0.4
TOP3A-217ENST00000584582 HDAC9Q9UKV0 1011 aa12.56□□□□□ -0.4
TOP3A-217ENST00000584582 ERLIN1O75477 346 aa12.56□□□□□ -0.4
TOP3A-217ENST00000584582 FAM13AO94988 1023 aa12.56□□□□□ -0.4
TOP3A-217ENST00000584582 GYS2P54840 703 aa12.56□□□□□ -0.4
TOP3A-217ENST00000584582 NR1I3Q14994 352 aa12.56□□□□□ -0.4
TOP3A-217ENST00000584582 DNAJC21Q5F1R6 531 aaKnown RBP12.56□□□□□ -0.4
TOP3A-217ENST00000584582 SP8Q8IXZ3 490 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms