RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 KRT25Q7Z3Z0 450 aa15.73■□□□□ 0.11
TVP23A-207ENST00000573360 TRMT44Q8IYL2 757 aaKnown RBP15.73■□□□□ 0.11
TVP23A-207ENST00000573360 DPF2Q92785 391 aa15.73■□□□□ 0.11
TVP23A-207ENST00000573360 ZMYND12Q9H0C1 365 aa15.73■□□□□ 0.11
TVP23A-207ENST00000573360 NAV1Q8NEY1 1877 aa15.73■□□□□ 0.11
TVP23A-207ENST00000573360 A0A1W2PQ27 194 aa15.73■□□□□ 0.11
TVP23A-207ENST00000573360 A0A1W2PQ64 194 aa15.73■□□□□ 0.11
TVP23A-207ENST00000573360 A0A1W2PQD8 194 aa15.73■□□□□ 0.11
TVP23A-207ENST00000573360 FAM83AQ86UY5 434 aa15.73■□□□□ 0.11
TVP23A-207ENST00000573360 CDK5RAP3Q96JB5 506 aa15.73■□□□□ 0.11
TVP23A-207ENST00000573360 SRPRBQ9Y5M8 271 aaKnown RBP15.73■□□□□ 0.11
TVP23A-207ENST00000573360 DDX39AO00148 427 aaKnown RBP15.73■□□□□ 0.11
TVP23A-207ENST00000573360 GRM1Q13255 1194 aa15.73■□□□□ 0.11
TVP23A-207ENST00000573360 GPC2Q8N158 579 aa15.73■□□□□ 0.11
TVP23A-207ENST00000573360 KIAA1468Q9P260 1216 aa15.73■□□□□ 0.11
TVP23A-207ENST00000573360 A0A087X0B3 334 aa15.72■□□□□ 0.11
TVP23A-207ENST00000573360 STAT6P42226 847 aa15.72■□□□□ 0.11
TVP23A-207ENST00000573360 TMC6Q7Z403 805 aa15.72■□□□□ 0.11
TVP23A-207ENST00000573360 VCPKMTQ9H867 229 aa15.72■□□□□ 0.11
TVP23A-207ENST00000573360 CCPG1Q9ULG6 757 aa15.72■□□□□ 0.11
TVP23A-207ENST00000573360 SLC37A4O43826 429 aa15.72■□□□□ 0.11
TVP23A-207ENST00000573360 CALCRLQ16602 461 aa15.72■□□□□ 0.11
TVP23A-207ENST00000573360 RESP18Q5W5W9 173 aa15.72■□□□□ 0.11
TVP23A-207ENST00000573360 KRBA2Q6ZNG9 492 aa15.72■□□□□ 0.11
TVP23A-207ENST00000573360 DCAF4Q8WV16 495 aa15.72■□□□□ 0.11
TVP23A-207ENST00000573360 TIAM2Q8IVF5 1701 aa15.72■□□□□ 0.11
TVP23A-207ENST00000573360 TPM4P67936 248 aa15.72■□□□□ 0.11
TVP23A-207ENST00000573360 SP4Q02446 784 aa15.72■□□□□ 0.11
TVP23A-207ENST00000573360 PLA2G4DQ86XP0 818 aa15.72■□□□□ 0.11
TVP23A-207ENST00000573360 PES1O00541 588 aaKnown RBP15.71■□□□□ 0.11
TVP23A-207ENST00000573360 NRDCO43847 1150 aa15.71■□□□□ 0.11
TVP23A-207ENST00000573360 HOOK2Q96ED9 719 aa15.71■□□□□ 0.11
TVP23A-207ENST00000573360 OTUD5Q96G74 571 aa15.71■□□□□ 0.11
TVP23A-207ENST00000573360 TEPSINQ96N21 525 aa15.71■□□□□ 0.11
TVP23A-207ENST00000573360 VPS33BQ9H267 617 aa15.71■□□□□ 0.11
TVP23A-207ENST00000573360 LTBP1Q14766 1721 aa15.71■□□□□ 0.11
TVP23A-207ENST00000573360 USP27XA6NNY8 438 aa15.71■□□□□ 0.11
TVP23A-207ENST00000573360 DCAF15Q66K64 600 aa15.71■□□□□ 0.11
TVP23A-207ENST00000573360 MAP1SQ66K74 1059 aaPredicted RBP15.71■□□□□ 0.11
TVP23A-207ENST00000573360 CYP2W1Q8TAV3 490 aa15.71■□□□□ 0.11
TVP23A-207ENST00000573360 TNFRSF25Q93038 417 aa15.71■□□□□ 0.11
TVP23A-207ENST00000573360 TMX2Q9Y320 296 aa15.71■□□□□ 0.11
TVP23A-207ENST00000573360 POTEIP0CG38 1075 aa15.71■□□□□ 0.1
TVP23A-207ENST00000573360 POTEJP0CG39 1038 aa15.71■□□□□ 0.1
TVP23A-207ENST00000573360 ERCC3P19447 782 aa15.71■□□□□ 0.1
TVP23A-207ENST00000573360 ZNF280AP59817 542 aaPredicted RBP15.71■□□□□ 0.1
TVP23A-207ENST00000573360 IL17AQ16552 155 aa15.71■□□□□ 0.1
TVP23A-207ENST00000573360 LRRC8AQ8IWT6 810 aa15.71■□□□□ 0.1
TVP23A-207ENST00000573360 SMARCE1Q969G3 411 aa15.71■□□□□ 0.1
TVP23A-207ENST00000573360 PURBQ96QR8 312 aaKnown RBP15.71■□□□□ 0.1
TVP23A-207ENST00000573360 DDX60LQ5H9U9 1706 aaKnown RBP15.7■□□□□ 0.1
TVP23A-207ENST00000573360 SNHG28P0DPA3 235 aa15.7■□□□□ 0.1
TVP23A-207ENST00000573360 IDEP14735 1019 aa15.7■□□□□ 0.1
TVP23A-207ENST00000573360 METTL16Q86W50 562 aaKnown RBP15.7■□□□□ 0.1
TVP23A-207ENST00000573360 CHURC1Q8WUH1 139 aa15.7■□□□□ 0.1
TVP23A-207ENST00000573360 RPAP3Q9H6T3 665 aaPredicted RBP15.7■□□□□ 0.1
TVP23A-207ENST00000573360 SH2D4AQ9H788 454 aa15.7■□□□□ 0.1
TVP23A-207ENST00000573360 ELP3Q9H9T3 547 aa15.7■□□□□ 0.1
TVP23A-207ENST00000573360 IFNKQ9P0W0 207 aa15.7■□□□□ 0.1
TVP23A-207ENST00000573360 POSTNQ15063 836 aa15.7■□□□□ 0.1
TVP23A-207ENST00000573360 RRAGBQ5VZM2 374 aa15.7■□□□□ 0.1
TVP23A-207ENST00000573360 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.7■□□□□ 0.1
TVP23A-207ENST00000573360 DDX25Q9UHL0 483 aaKnown RBP15.7■□□□□ 0.1
TVP23A-207ENST00000573360 OR52Z1P0C646 297 aa15.7■□□□□ 0.1
TVP23A-207ENST00000573360 STAT3P40763 770 aa15.7■□□□□ 0.1
TVP23A-207ENST00000573360 FAM177A1Q8N128 213 aaPredicted RBP15.7■□□□□ 0.1
TVP23A-207ENST00000573360 PAGR1Q9BTK6 254 aa15.7■□□□□ 0.1
TVP23A-207ENST00000573360 SH3GLB2Q9NR46 395 aa15.7■□□□□ 0.1
TVP23A-207ENST00000573360 HOOK1Q9UJC3 728 aaKnown RBP15.7■□□□□ 0.1
TVP23A-207ENST00000573360 SMTNL1A8MU46 457 aa15.69■□□□□ 0.1
TVP23A-207ENST00000573360 CAVIN2O95810 425 aa15.69■□□□□ 0.1
TVP23A-207ENST00000573360 CYP4A11Q02928 519 aa15.69■□□□□ 0.1
TVP23A-207ENST00000573360 IQCB1Q15051 598 aa15.69■□□□□ 0.1
TVP23A-207ENST00000573360 GADL1Q6ZQY3 521 aa15.69■□□□□ 0.1
TVP23A-207ENST00000573360 DYMQ7RTS9 669 aa15.69■□□□□ 0.1
TVP23A-207ENST00000573360 ANO3Q9BYT9 981 aa15.69■□□□□ 0.1
TVP23A-207ENST00000573360 KIAA1551Q9HCM1 1747 aa15.69■□□□□ 0.1
TVP23A-207ENST00000573360 CDK11BP21127 795 aaKnown RBP15.69■□□□□ 0.1
TVP23A-207ENST00000573360 ATP2C1P98194 919 aaPredicted RBP15.69■□□□□ 0.1
TVP23A-207ENST00000573360 NID2Q14112 1375 aa15.69■□□□□ 0.1
TVP23A-207ENST00000573360 ATRNL1Q5VV63 1379 aa15.69■□□□□ 0.1
TVP23A-207ENST00000573360 CENPFP49454 3210 aa15.69■□□□□ 0.1
TVP23A-207ENST00000573360 MYCLP12524 364 aaPredicted RBP15.69■□□□□ 0.1
TVP23A-207ENST00000573360 CLMNQ96JQ2 1002 aa15.69■□□□□ 0.1
TVP23A-207ENST00000573360 LRWD1Q9UFC0 647 aa15.69■□□□□ 0.1
TVP23A-207ENST00000573360 PPP1R12BO60237 982 aaPredicted RBP15.68■□□□□ 0.1
TVP23A-207ENST00000573360 LDHDQ86WU2 507 aa15.68■□□□□ 0.1
TVP23A-207ENST00000573360 MKL1Q969V6 931 aa15.68■□□□□ 0.1
TVP23A-207ENST00000573360 CCDC34Q96HJ3 373 aa15.68■□□□□ 0.1
TVP23A-207ENST00000573360 WNK4Q96J92 1243 aa15.68■□□□□ 0.1
TVP23A-207ENST00000573360 SERPINC1P01008 464 aa15.68■□□□□ 0.1
TVP23A-207ENST00000573360 CACNB1Q02641 598 aaPredicted RBP15.68■□□□□ 0.1
TVP23A-207ENST00000573360 APOBEC3FQ8IUX4 373 aaKnown RBP15.68■□□□□ 0.1
TVP23A-207ENST00000573360 FERMT2Q96AC1 680 aa15.68■□□□□ 0.1
TVP23A-207ENST00000573360 ATG4CQ96DT6 458 aa15.68■□□□□ 0.1
TVP23A-207ENST00000573360 CSADQ9Y600 493 aa15.68■□□□□ 0.1
TVP23A-207ENST00000573360 MAST2Q6P0Q8 1798 aa15.68■□□□□ 0.1
TVP23A-207ENST00000573360 MEIS1O00470 390 aa15.67■□□□□ 0.1
TVP23A-207ENST00000573360 ZBTB22O15209 634 aa15.67■□□□□ 0.1
TVP23A-207ENST00000573360 CABP7Q86V35 215 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms