RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 CERKLQ49MI3 558 aaPredicted RBP18.57■□□□□ 0.56
CCNF-204ENST00000564333 TCP11X2Q5H9J9 407 aa18.57■□□□□ 0.56
CCNF-204ENST00000564333 CCDC47Q96A33 483 aaKnown RBP18.57■□□□□ 0.56
CCNF-204ENST00000564333 CALML4Q96GE6 196 aa18.57■□□□□ 0.56
CCNF-204ENST00000564333 MMTAG2Q9BU76 263 aaKnown RBP18.57■□□□□ 0.56
CCNF-204ENST00000564333 TAB2Q9NYJ8 693 aa18.57■□□□□ 0.56
CCNF-204ENST00000564333 PI4KBQ9UBF8 816 aa18.57■□□□□ 0.56
CCNF-204ENST00000564333 TRIM49BA6NDI0 452 aa18.57■□□□□ 0.56
CCNF-204ENST00000564333 GOLGA6L9A6NEM1 432 aa18.57■□□□□ 0.56
CCNF-204ENST00000564333 NPM3O75607 178 aaKnown RBP18.57■□□□□ 0.56
CCNF-204ENST00000564333 CLK2P49760 499 aaKnown RBP18.57■□□□□ 0.56
CCNF-204ENST00000564333 FXR2P51116 673 aaKnown RBP eCLIP18.57■□□□□ 0.56
CCNF-204ENST00000564333 RBL2Q08999 1139 aa18.57■□□□□ 0.56
CCNF-204ENST00000564333 SHROOM1Q2M3G4 852 aaPredicted RBP18.57■□□□□ 0.56
CCNF-204ENST00000564333 SH3BP5LQ7L8J4 393 aa18.57■□□□□ 0.56
CCNF-204ENST00000564333 GIMAP8Q8ND71 665 aaPredicted RBP18.57■□□□□ 0.56
CCNF-204ENST00000564333 DCAF4Q8WV16 495 aa18.57■□□□□ 0.56
CCNF-204ENST00000564333 TRIM9Q9C026 710 aa18.57■□□□□ 0.56
CCNF-204ENST00000564333 H7C1D1 291 aa18.56■□□□□ 0.56
CCNF-204ENST00000564333 PSMA7O14818 248 aa18.56■□□□□ 0.56
CCNF-204ENST00000564333 N4BP3O15049 544 aa18.56■□□□□ 0.56
CCNF-204ENST00000564333 EDIL3O43854 480 aa18.56■□□□□ 0.56
CCNF-204ENST00000564333 MFAP3LO75121 409 aa18.56■□□□□ 0.56
CCNF-204ENST00000564333 TPM1P09493 284 aa18.56■□□□□ 0.56
CCNF-204ENST00000564333 EEF2P13639 858 aaKnown RBP18.56■□□□□ 0.56
CCNF-204ENST00000564333 ETF1P62495 437 aaKnown RBP18.56■□□□□ 0.56
CCNF-204ENST00000564333 ASIC1P78348 528 aa18.56■□□□□ 0.56
CCNF-204ENST00000564333 TAF3Q5VWG9 929 aa18.56■□□□□ 0.56
CCNF-204ENST00000564333 C7orf25Q9BPX7 421 aa18.56■□□□□ 0.56
CCNF-204ENST00000564333 EXOC1Q9NV70 894 aa18.56■□□□□ 0.56
CCNF-204ENST00000564333 NYAP2Q9P242 653 aa18.56■□□□□ 0.56
CCNF-204ENST00000564333 RAD21O60216 631 aa18.55■□□□□ 0.56
CCNF-204ENST00000564333 CCDC93Q567U6 631 aa18.55■□□□□ 0.56
CCNF-204ENST00000564333 TOGARAM2Q6ZUX3 1019 aa18.55■□□□□ 0.56
CCNF-204ENST00000564333 VPS16Q9H269 839 aa18.55■□□□□ 0.56
CCNF-204ENST00000564333 KANSL2Q9H9L4 492 aa18.55■□□□□ 0.56
CCNF-204ENST00000564333 LRWD1Q9UFC0 647 aa18.55■□□□□ 0.56
CCNF-204ENST00000564333 COL2A1P02458 1487 aaPredicted RBP18.55■□□□□ 0.56
CCNF-204ENST00000564333 LRRC10BA6NIK2 292 aa18.55■□□□□ 0.56
CCNF-204ENST00000564333 MRPL12P52815 198 aaKnown RBP18.55■□□□□ 0.56
CCNF-204ENST00000564333 PMS1P54277 932 aaKnown RBP18.55■□□□□ 0.56
CCNF-204ENST00000564333 AMPD3Q01432 767 aa18.55■□□□□ 0.56
CCNF-204ENST00000564333 ICA1Q05084 483 aa18.55■□□□□ 0.56
CCNF-204ENST00000564333 MKL1Q969V6 931 aa18.55■□□□□ 0.56
CCNF-204ENST00000564333 TRIM47Q96LD4 638 aa18.55■□□□□ 0.56
CCNF-204ENST00000564333 NAA15Q9BXJ9 866 aaKnown RBP18.55■□□□□ 0.56
CCNF-204ENST00000564333 RAB34Q9BZG1 259 aa18.55■□□□□ 0.56
CCNF-204ENST00000564333 FAM53CQ9NYF3 392 aa18.55■□□□□ 0.56
CCNF-204ENST00000564333 ATRNL1Q5VV63 1379 aa18.54■□□□□ 0.56
CCNF-204ENST00000564333 GYPCP04921 128 aa18.54■□□□□ 0.56
CCNF-204ENST00000564333 SLC1A4P43007 532 aa18.54■□□□□ 0.56
CCNF-204ENST00000564333 PDE4DQ08499 809 aa18.54■□□□□ 0.56
CCNF-204ENST00000564333 GRB10Q13322 594 aa18.54■□□□□ 0.56
CCNF-204ENST00000564333 SLC15A2Q16348 729 aa18.54■□□□□ 0.56
CCNF-204ENST00000564333 SLFN13Q68D06 897 aa18.54■□□□□ 0.56
CCNF-204ENST00000564333 PPP4R3AQ6IN85 833 aa18.54■□□□□ 0.56
CCNF-204ENST00000564333 TATDN1Q6P1N9 297 aa18.54■□□□□ 0.56
CCNF-204ENST00000564333 TRIM65Q6PJ69 517 aa18.54■□□□□ 0.56
CCNF-204ENST00000564333 TMEM179Q6ZVK1 233 aa18.54■□□□□ 0.56
CCNF-204ENST00000564333 CNGA4Q8IV77 575 aa18.54■□□□□ 0.56
CCNF-204ENST00000564333 SUPT20HQ8NEM7 779 aa18.54■□□□□ 0.56
CCNF-204ENST00000564333 C7orf43Q8WVR3 580 aa18.54■□□□□ 0.56
CCNF-204ENST00000564333 THAP9Q9H5L6 903 aa18.54■□□□□ 0.56
CCNF-204ENST00000564333 STK17AQ9UEE5 414 aa18.54■□□□□ 0.56
CCNF-204ENST00000564333 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCNF-204ENST00000564333 CASP14P31944 242 aa18.53■□□□□ 0.56
CCNF-204ENST00000564333 BMS1Q14692 1282 aaKnown RBP18.53■□□□□ 0.56
CCNF-204ENST00000564333 SEPT2Q15019 361 aa18.53■□□□□ 0.56
CCNF-204ENST00000564333 ELF2Q15723 593 aa18.53■□□□□ 0.56
CCNF-204ENST00000564333 QRICH1Q2TAL8 776 aa18.53■□□□□ 0.56
CCNF-204ENST00000564333 CPLX3Q8WVH0 158 aa18.53■□□□□ 0.56
CCNF-204ENST00000564333 CCDC51Q96ER9 411 aa18.53■□□□□ 0.56
CCNF-204ENST00000564333 DHTKD1Q96HY7 919 aaPredicted RBP18.53■□□□□ 0.56
CCNF-204ENST00000564333 CDK5RAP3Q96JB5 506 aa18.53■□□□□ 0.56
CCNF-204ENST00000564333 PSTPIP2Q9H939 334 aa18.53■□□□□ 0.56
CCNF-204ENST00000564333 ARGLU1Q9NWB6 273 aaPredicted RBP18.53■□□□□ 0.56
CCNF-204ENST00000564333 DNAI1Q9UI46 699 aa18.53■□□□□ 0.56
CCNF-204ENST00000564333 POTEMA6NI47 508 aa18.53■□□□□ 0.56
CCNF-204ENST00000564333 SOWAHDA6NJG2 315 aa18.53■□□□□ 0.56
CCNF-204ENST00000564333 TRIM14Q14142 442 aa18.53■□□□□ 0.56
CCNF-204ENST00000564333 CDC37Q16543 378 aaPredicted RBP18.53■□□□□ 0.56
CCNF-204ENST00000564333 TTI2Q6NXR4 508 aa18.53■□□□□ 0.56
CCNF-204ENST00000564333 NOC3LQ8WTT2 800 aaKnown RBP18.53■□□□□ 0.56
CCNF-204ENST00000564333 PNMA5Q96PV4 448 aa18.53■□□□□ 0.56
CCNF-204ENST00000564333 TDRD3Q9H7E2 651 aaKnown RBP18.53■□□□□ 0.56
CCNF-204ENST00000564333 STK32BQ9NY57 414 aa18.53■□□□□ 0.56
CCNF-204ENST00000564333 DDX25Q9UHL0 483 aaKnown RBP18.53■□□□□ 0.56
CCNF-204ENST00000564333 PPIP5K2O43314 1243 aa18.52■□□□□ 0.56
CCNF-204ENST00000564333 GDF11O95390 407 aa18.52■□□□□ 0.56
CCNF-204ENST00000564333 GCFC2P16383 781 aaKnown RBP18.52■□□□□ 0.56
CCNF-204ENST00000564333 EEF1GP26641 437 aaKnown RBP18.52■□□□□ 0.56
CCNF-204ENST00000564333 PPP1R2P41236 205 aa18.52■□□□□ 0.56
CCNF-204ENST00000564333 NAA30Q147X3 362 aaPredicted RBP18.52■□□□□ 0.56
CCNF-204ENST00000564333 CC2D2BQ6DHV5 1058 aa18.52■□□□□ 0.56
CCNF-204ENST00000564333 IRF2BP1Q8IU81 584 aa18.52■□□□□ 0.56
CCNF-204ENST00000564333 SNX29Q8TEQ0 813 aa18.52■□□□□ 0.56
CCNF-204ENST00000564333 DESI2Q9BSY9 194 aa18.52■□□□□ 0.56
CCNF-204ENST00000564333 GLT8D2Q9H1C3 349 aa18.52■□□□□ 0.56
CCNF-204ENST00000564333 BLOC1S4Q9NUP1 217 aa18.52■□□□□ 0.56
CCNF-204ENST00000564333 ENTPD3O75355 529 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms