RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 MARCH10Q8NA82 808 aaPredicted RBP4.93□□□□□ -1.62
SHCBP1-202ENST00000563219 KCNC2Q96PR1 638 aa4.93□□□□□ -1.62
SHCBP1-202ENST00000563219 APBA2Q99767 749 aa4.93□□□□□ -1.62
SHCBP1-202ENST00000563219 ZCCHC4Q9H5U6 513 aa4.93□□□□□ -1.62
SHCBP1-202ENST00000563219 AP5S1Q9NUS5 200 aa4.93□□□□□ -1.62
SHCBP1-202ENST00000563219 SNTG2Q9NY99 539 aa4.93□□□□□ -1.62
SHCBP1-202ENST00000563219 DIS3Q9Y2L1 958 aaKnown RBP4.93□□□□□ -1.62
SHCBP1-202ENST00000563219 NCANO14594 1321 aa4.93□□□□□ -1.62
SHCBP1-202ENST00000563219 FAM221BA6H8Z2 402 aa4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 B8ZZF3 427 aa4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 PI3P19957 117 aa4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 CBX2Q14781 532 aaPredicted RBP4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 NOL9Q5SY16 702 aaKnown RBP4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 ADAT2Q7Z6V5 191 aaKnown RBP4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 ARHGEF39Q8N4T4 335 aa4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 FIBCD1Q8N539 461 aa4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 MZB1Q8WU39 189 aa4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 DACT3Q96B18 629 aaPredicted RBP4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 FGD4Q96M96 766 aa4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 JMJD8Q96S16 334 aa4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 DSCC1Q9BVC3 393 aa4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 SLC12A9Q9BXP2 914 aa4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 ZSWIM4Q9H7M6 989 aa4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 EPB41L4AQ9HCS5 686 aaPredicted RBP4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 APEX2Q9UBZ4 518 aa4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 CDK11AQ9UQ88 783 aaPredicted RBP4.92□□□□□ -1.62
SHCBP1-202ENST00000563219 IRS4O14654 1257 aaPredicted RBP4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 CDR1P51861 262 aa4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 TMEM62Q0P6H9 643 aa4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 GRB10Q13322 594 aa4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 RAB3GAP1Q15042 981 aa4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 HLA-DQA1Q5Y7H0 255 aa4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 CWF19L1Q69YN2 538 aaKnown RBP4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 LDHDQ86WU2 507 aa4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 TMEFF1Q8IYR6 380 aa4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 BVESQ8NE79 360 aa4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 NUP43Q8NFH3 380 aa4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 BRF1Q92994 677 aa4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 SGSM3Q96HU1 749 aa4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 SRPK1Q96SB4 655 aaKnown RBP4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 PIF1Q9H611 641 aa4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 CGGBP1Q9UFW8 167 aaPredicted RBP4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 EMC9Q9Y3B6 208 aa4.91□□□□□ -1.62
SHCBP1-202ENST00000563219 IQCA1LA6NCM1 817 aa4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 H0Y8X5 98 aa4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 TRIM13O60858 407 aa4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 CAPNS1P04632 268 aa4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 GSTM1P09488 218 aa4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 NOP2P46087 812 aaKnown RBP4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 AFF3P51826 1226 aaKnown RBP4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 MVKQ03426 396 aa4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 BMS1Q14692 1282 aaKnown RBP4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 SV2CQ496J9 727 aa4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 TMC6Q7Z403 805 aa4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 IGDCC3Q8IVU1 814 aa4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 CRACR2BQ8N4Y2 399 aaPredicted RBP4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 RELTQ969Z4 430 aa4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 MRFAP1L1Q96HT8 127 aa4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 MRGPRX3Q96LB0 322 aa4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 NOL6Q9H6R4 1146 aaKnown RBP4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 TNFRSF12AQ9NP84 129 aa4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 IMPACTQ9P2X3 320 aa4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 AKT3Q9Y243 479 aa4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 SF3B6Q9Y3B4 125 aaKnown RBP4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 PCDHA5Q9Y5H7 936 aa4.9□□□□□ -1.63
SHCBP1-202ENST00000563219 A0A1W2PQU0 124 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 CCDC85CA6NKD9 419 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 NUDT19A8MXV4 375 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 AGRPO00253 132 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 NOP56O00567 594 aaKnown RBP4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 ITGAVP06756 1048 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 NR1I3Q14994 352 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 MTERF2Q49AM1 385 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 CNKSR3Q6P9H4 555 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 POMZP3Q6PJE2 187 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 RPTNQ6XPR3 784 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 SPATC1Q76KD6 591 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 NOP9Q86U38 636 aaKnown RBP4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 ZNF227Q86WZ6 799 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 FAM129CQ86XR2 697 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 TRIM59Q8IWR1 403 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 LRRC47Q8N1G4 583 aaKnown RBP4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 NAT16Q8N8M0 369 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 JMYQ8N9B5 988 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 ADCY4Q8NFM4 1077 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 FCRL3Q96P31 734 aaPredicted RBP4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 SUGT1Q9Y2Z0 365 aa4.89□□□□□ -1.63
SHCBP1-202ENST00000563219 A0A0G2JLL6 359 aaPredicted RBP4.88□□□□□ -1.63
SHCBP1-202ENST00000563219 A0A1W2PQ27 194 aa4.88□□□□□ -1.63
SHCBP1-202ENST00000563219 A0A1W2PQ64 194 aa4.88□□□□□ -1.63
SHCBP1-202ENST00000563219 A0A1W2PQC6 194 aa4.88□□□□□ -1.63
SHCBP1-202ENST00000563219 A0A1W2PQD8 194 aa4.88□□□□□ -1.63
SHCBP1-202ENST00000563219 MSL3P1P0C860 447 aa4.88□□□□□ -1.63
SHCBP1-202ENST00000563219 MAPKAPK2P49137 400 aa4.88□□□□□ -1.63
SHCBP1-202ENST00000563219 POU4F1Q01851 419 aa4.88□□□□□ -1.63
SHCBP1-202ENST00000563219 IFRD2Q12894 506 aaPredicted RBP4.88□□□□□ -1.63
SHCBP1-202ENST00000563219 PPP2R5DQ14738 602 aa4.88□□□□□ -1.63
SHCBP1-202ENST00000563219 CYP2R1Q6VVX0 501 aa4.88□□□□□ -1.63
SHCBP1-202ENST00000563219 JAMLQ86YT9 394 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms