RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 BACE2Q9Y5Z0 518 aa9.18□□□□□ -0.94
SMG1-204ENST00000561940 ANKRD62A6NC57 917 aa9.17□□□□□ -0.94
SMG1-204ENST00000561940 TBC1D8O95759 1140 aa9.17□□□□□ -0.94
SMG1-204ENST00000561940 ITGAVP06756 1048 aa9.17□□□□□ -0.94
SMG1-204ENST00000561940 C8AP07357 584 aa9.17□□□□□ -0.94
SMG1-204ENST00000561940 MSL3P1P0C860 447 aa9.17□□□□□ -0.94
SMG1-204ENST00000561940 CYP4F8P98187 520 aa9.17□□□□□ -0.94
SMG1-204ENST00000561940 SCRN1Q12765 414 aa9.17□□□□□ -0.94
SMG1-204ENST00000561940 GRB10Q13322 594 aa9.17□□□□□ -0.94
SMG1-204ENST00000561940 LAPTM5Q13571 262 aa9.17□□□□□ -0.94
SMG1-204ENST00000561940 GTF2IRD2BQ6EKJ0 949 aa9.17□□□□□ -0.94
SMG1-204ENST00000561940 GTF2IRD2Q86UP8 949 aa9.17□□□□□ -0.94
SMG1-204ENST00000561940 BTN2A2Q8WVV5 523 aa9.17□□□□□ -0.94
SMG1-204ENST00000561940 FAM84AQ96KN4 292 aa9.17□□□□□ -0.94
SMG1-204ENST00000561940 A0A1W2PQU0 124 aa9.16□□□□□ -0.94
SMG1-204ENST00000561940 PNLIPP16233 465 aa9.16□□□□□ -0.94
SMG1-204ENST00000561940 MVKQ03426 396 aa9.16□□□□□ -0.94
SMG1-204ENST00000561940 FOXB2Q5VYV0 432 aa9.16□□□□□ -0.94
SMG1-204ENST00000561940 EEF1DP3Q658K8 133 aa9.16□□□□□ -0.94
SMG1-204ENST00000561940 RCSD1Q6JBY9 416 aa9.16□□□□□ -0.94
SMG1-204ENST00000561940 POMZP3Q6PJE2 187 aa9.16□□□□□ -0.94
SMG1-204ENST00000561940 CYP2R1Q6VVX0 501 aa9.16□□□□□ -0.94
SMG1-204ENST00000561940 TRIM59Q8IWR1 403 aa9.16□□□□□ -0.94
SMG1-204ENST00000561940 FBXO15Q8NCQ5 510 aaPredicted RBP9.16□□□□□ -0.94
SMG1-204ENST00000561940 APPBP2Q92624 585 aa9.16□□□□□ -0.94
SMG1-204ENST00000561940 MRGPRX3Q96LB0 322 aa9.16□□□□□ -0.94
SMG1-204ENST00000561940 SLC38A3Q99624 504 aa9.16□□□□□ -0.94
SMG1-204ENST00000561940 EPN3Q9H201 632 aa9.16□□□□□ -0.94
SMG1-204ENST00000561940 CRTAC1Q9NQ79 661 aa9.16□□□□□ -0.94
SMG1-204ENST00000561940 TACR1P25103 407 aa9.15□□□□□ -0.94
SMG1-204ENST00000561940 TKFCQ3LXA3 575 aa9.15□□□□□ -0.94
SMG1-204ENST00000561940 HOMER1Q86YM7 354 aa9.15□□□□□ -0.94
SMG1-204ENST00000561940 ARHGEF4Q9NR80 690 aa9.15□□□□□ -0.94
SMG1-204ENST00000561940 CLEC1BQ9P126 229 aa9.15□□□□□ -0.94
SMG1-204ENST00000561940 ACSL6Q9UKU0 697 aa9.15□□□□□ -0.94
SMG1-204ENST00000561940 OR14I1A6ND48 311 aa9.14□□□□□ -0.95
SMG1-204ENST00000561940 PLEKHG4Q58EX7 1191 aa9.14□□□□□ -0.95
SMG1-204ENST00000561940 YOD1Q5VVQ6 348 aaPredicted RBP9.14□□□□□ -0.95
SMG1-204ENST00000561940 TMEM132EQ6IEE7 984 aa9.14□□□□□ -0.95
SMG1-204ENST00000561940 ZNF227Q86WZ6 799 aa9.14□□□□□ -0.95
SMG1-204ENST00000561940 IRF2BP1Q8IU81 584 aa9.14□□□□□ -0.95
SMG1-204ENST00000561940 LRRC47Q8N1G4 583 aaKnown RBP9.14□□□□□ -0.95
SMG1-204ENST00000561940 CRACR2BQ8N4Y2 399 aaPredicted RBP9.14□□□□□ -0.95
SMG1-204ENST00000561940 KCNN1Q92952 543 aa9.14□□□□□ -0.95
SMG1-204ENST00000561940 KRTAP9-9Q9BYP9 154 aa9.14□□□□□ -0.95
SMG1-204ENST00000561940 KRTAP9-4Q9BYQ2 154 aa9.14□□□□□ -0.95
SMG1-204ENST00000561940 A0A1W2PQJ5 194 aa9.13□□□□□ -0.95
SMG1-204ENST00000561940 NUDT19A8MXV4 375 aa9.13□□□□□ -0.95
SMG1-204ENST00000561940 PAMP19021 973 aa9.13□□□□□ -0.95
SMG1-204ENST00000561940 L1CAMP32004 1257 aa9.13□□□□□ -0.95
SMG1-204ENST00000561940 ARL4AP40617 200 aa9.13□□□□□ -0.95
SMG1-204ENST00000561940 ECI1P42126 302 aa9.13□□□□□ -0.95
SMG1-204ENST00000561940 GRIA2P42262 883 aa9.13□□□□□ -0.95
SMG1-204ENST00000561940 SF1Q15637 639 aaKnown RBP9.13□□□□□ -0.95
SMG1-204ENST00000561940 ZBTB38Q8NAP3 1195 aaPredicted RBP9.13□□□□□ -0.95
SMG1-204ENST00000561940 SGPP1Q9BX95 441 aa9.13□□□□□ -0.95
SMG1-204ENST00000561940 ZNF552Q9H707 407 aaPredicted RBP9.13□□□□□ -0.95
SMG1-204ENST00000561940 GOLGA2P5Q9HBQ8 144 aa9.13□□□□□ -0.95
SMG1-204ENST00000561940 NPHP3-ACAD11A0A0J9YXS1 232 aa9.12□□□□□ -0.95
SMG1-204ENST00000561940 MYOCOSA0A1B0GUC4 107 aa9.12□□□□□ -0.95
SMG1-204ENST00000561940 IQCA1LA6NCM1 817 aa9.12□□□□□ -0.95
SMG1-204ENST00000561940 THBDP07204 575 aa9.12□□□□□ -0.95
SMG1-204ENST00000561940 PLS3P13797 630 aa9.12□□□□□ -0.95
SMG1-204ENST00000561940 PPP2R2AP63151 447 aa9.12□□□□□ -0.95
SMG1-204ENST00000561940 SGSM3Q96HU1 749 aa9.12□□□□□ -0.95
SMG1-204ENST00000561940 EXOC2Q96KP1 924 aa9.12□□□□□ -0.95
SMG1-204ENST00000561940 MCOLN1Q9GZU1 580 aa9.12□□□□□ -0.95
SMG1-204ENST00000561940 RWDD3Q9Y3V2 267 aa9.12□□□□□ -0.95
SMG1-204ENST00000561940 AGRPO00253 132 aa9.11□□□□□ -0.95
SMG1-204ENST00000561940 ASMTLO95671 621 aa9.11□□□□□ -0.95
SMG1-204ENST00000561940 SNRPB2P08579 225 aaKnown RBP9.11□□□□□ -0.95
SMG1-204ENST00000561940 KCNJ6P48051 423 aa9.11□□□□□ -0.95
SMG1-204ENST00000561940 CYP4F3Q08477 520 aa9.11□□□□□ -0.95
SMG1-204ENST00000561940 RAB3GAP1Q15042 981 aa9.11□□□□□ -0.95
SMG1-204ENST00000561940 PKN1Q16512 942 aa9.11□□□□□ -0.95
SMG1-204ENST00000561940 BICRALQ6AI39 1079 aa9.11□□□□□ -0.95
SMG1-204ENST00000561940 COPS5Q92905 334 aa9.11□□□□□ -0.95
SMG1-204ENST00000561940 PUS7Q96PZ0 661 aaKnown RBP9.11□□□□□ -0.95
SMG1-204ENST00000561940 NKX2-4Q9H2Z4 354 aa9.11□□□□□ -0.95
SMG1-204ENST00000561940 CYP26B1Q9NR63 512 aa9.11□□□□□ -0.95
SMG1-204ENST00000561940 BTBD11A6QL63 1104 aa9.1□□□□□ -0.95
SMG1-204ENST00000561940 ETV2O00321 342 aaPredicted RBP9.1□□□□□ -0.95
SMG1-204ENST00000561940 PPP1R12AO14974 1030 aaPredicted RBP9.1□□□□□ -0.95
SMG1-204ENST00000561940 PPP1R11O60927 126 aaPredicted RBP9.1□□□□□ -0.95
SMG1-204ENST00000561940 MPOP05164 745 aa9.1□□□□□ -0.95
SMG1-204ENST00000561940 TMEM253P0C7T8 217 aa9.1□□□□□ -0.95
SMG1-204ENST00000561940 SRSF3P84103 164 aaKnown RBP9.1□□□□□ -0.95
SMG1-204ENST00000561940 PRSS53Q2L4Q9 553 aa9.1□□□□□ -0.95
SMG1-204ENST00000561940 FAM209AQ5JX71 171 aa9.1□□□□□ -0.95
SMG1-204ENST00000561940 KIAA0907Q7Z7F0 614 aaPredicted RBP9.1□□□□□ -0.95
SMG1-204ENST00000561940 ZSWIM2Q8NEG5 633 aa9.1□□□□□ -0.95
SMG1-204ENST00000561940 GULP1Q9UBP9 304 aa9.1□□□□□ -0.95
SMG1-204ENST00000561940 C1QTNF9P0C862 333 aa9.09□□□□□ -0.95
SMG1-204ENST00000561940 C21orf62-AS1Q17RA5 79 aa9.09□□□□□ -0.95
SMG1-204ENST00000561940 MBLAC2Q68D91 279 aa9.09□□□□□ -0.95
SMG1-204ENST00000561940 C16orf86Q6ZW13 317 aa9.09□□□□□ -0.95
SMG1-204ENST00000561940 FRS2Q8WU20 508 aa9.09□□□□□ -0.95
SMG1-204ENST00000561940 SLC26A8Q96RN1 970 aa9.09□□□□□ -0.95
SMG1-204ENST00000561940 AARSD1Q9BTE6 412 aaKnown RBP9.09□□□□□ -0.95
SMG1-204ENST00000561940 RXFP1Q9HBX9 757 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms