RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 TTC30AQ86WT1 665 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 CMIPQ8IY22 773 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 EFCAB13Q8IY85 973 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 ZNF713Q8N859 430 aaPredicted RBP7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 HVCN1Q96D96 273 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 INTS4Q96HW7 963 aaKnown RBP7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 KANSL3Q9P2N6 904 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 ADAM21Q9UKJ8 722 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 MAP4K5Q9Y4K4 846 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 NUB1Q9Y5A7 615 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 PCDHB5Q9Y5E4 795 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 METP08581 1390 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 A6NNZ2 444 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 FYB1O15117 783 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 NEMFO60524 1076 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 CCDC192P0DO97 292 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 MCM2P49736 904 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 PCBP2Q15366 365 aaKnown RBP eCLIP7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 ZRSR1Q15695 479 aaKnown RBP7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 ANKRD45Q5TZF3 282 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 SYDE1Q6ZW31 735 aaPredicted RBP7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 NBPF5PQ86XG9 351 aaPredicted RBP7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 PLA2G4DQ86XP0 818 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 TMX3Q96JJ7 454 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 TNIP3Q96KP6 325 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 PRDM11Q9NQV5 511 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 KCND1Q9NSA2 647 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 LMTK3Q96Q04 1460 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 USP27XA6NNY8 438 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 M0R2C6 588 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 PSEN2P49810 448 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 LIG3P49916 1009 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 ZNF75DP51815 510 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 SYDE2Q5VT97 1194 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 FAM196AQ6ZSG2 479 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 ZNF438Q7Z4V0 828 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 WAPLQ7Z5K2 1190 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 SERINC2Q96SA4 455 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 BARD1Q99728 777 aaKnown RBP7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 SH3GLB2Q9NR46 395 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 CWC25Q9NXE8 425 aaPredicted RBP7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 CABP1Q9NZU7 370 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 AKAP12Q02952 1782 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 KLRG2A4D1S0 409 aaPredicted RBP7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 TRPA1O75762 1119 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 RPN1P04843 607 aaKnown RBP7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 TPM1P09493 284 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 CASTP20810 708 aaKnown RBP7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 PSMA6P60900 246 aaKnown RBP7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 ATF7IPQ6VMQ6 1270 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 DNAAF4Q8WXU2 420 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 GJA10Q969M2 543 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 AP1M1Q9BXS5 423 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 ADGRB2O60241 1585 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 WDR33Q9C0J8 1336 aaKnown RBP7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 PLEKHG1Q9ULL1 1385 aa7.6□□□□□ -1.19
TSPAN3-209ENST00000560715 SMC2O95347 1197 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 TBC1D8O95759 1140 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 G3BP1Q13283 466 aaKnown RBP eCLIP7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 INTS3Q68E01 1043 aaKnown RBP7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 FGD2Q7Z6J4 655 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 GLIS3Q8NEA6 775 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 ZDHHC1Q8WTX9 485 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 ITFG2Q969R8 447 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 BORCS6Q96GS4 357 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 RETREG1Q9H6L5 497 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 ORC3Q9UBD5 711 aaPredicted RBP7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 MON2Q7Z3U7 1717 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 RPAP1Q9BWH6 1393 aaPredicted RBP7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 COL3A1P02461 1466 aaPredicted RBP7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 ITSN1Q15811 1721 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 ABHD14A-ACY1A0A1B0GW23 586 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 UPK3BL1B0FP48 263 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 UPK3BL2E5RIL1 263 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 ATMINO43313 823 aaPredicted RBP7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 ORC4O43929 436 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 PHACTR2O75167 634 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 SASH3O75995 380 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 GSPT1P15170 499 aaKnown RBP7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 PPP2R5CQ13362 524 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 TADA2BQ86TJ2 420 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 TTC6Q86TZ1 520 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 LRRC8AQ8IWT6 810 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 TRIM22Q8IYM9 498 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 ZSWIM6Q9HCJ5 1215 aa7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 CPSF1Q10570 1443 aaKnown RBP7.59□□□□□ -1.19
TSPAN3-209ENST00000560715 SLIT1O75093 1534 aa7.59□□□□□ -1.2
TSPAN3-209ENST00000560715 H0YHG0 523 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 JMJD7P0C870 316 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 SETSIPP0DME0 302 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 CDC25BP30305 580 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 SARNPP82979 210 aaKnown RBP7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 TAF11Q15544 211 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 SLC10A6Q3KNW5 377 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 FAM186BQ8IYM0 893 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 TMEM57Q8N5G2 664 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 ZBTB38Q8NAP3 1195 aaPredicted RBP7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 PI4K2BQ8TCG2 481 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms