RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 TRIM55Q9BYV6 548 aa5.22□□□□□ -1.57
CASC4-210ENST00000559550 ADAM7Q9H2U9 754 aa5.22□□□□□ -1.57
CASC4-210ENST00000559550 MBD1Q9UIS9 605 aaPredicted RBP5.22□□□□□ -1.57
CASC4-210ENST00000559550 AKT3Q9Y243 479 aa5.22□□□□□ -1.57
CASC4-210ENST00000559550 GPR55Q9Y2T6 319 aaPredicted RBP5.22□□□□□ -1.57
CASC4-210ENST00000559550 FITM1A5D6W6 292 aa5.21□□□□□ -1.58
CASC4-210ENST00000559550 AURKAO14965 403 aa5.21□□□□□ -1.58
CASC4-210ENST00000559550 FGF10O15520 208 aaPredicted RBP5.21□□□□□ -1.58
CASC4-210ENST00000559550 KCNH1O95259 989 aa5.21□□□□□ -1.58
CASC4-210ENST00000559550 NAT2P11245 290 aa5.21□□□□□ -1.58
CASC4-210ENST00000559550 AMPD2Q01433 879 aa5.21□□□□□ -1.58
CASC4-210ENST00000559550 RBL2Q08999 1139 aa5.21□□□□□ -1.58
CASC4-210ENST00000559550 GRB10Q13322 594 aa5.21□□□□□ -1.58
CASC4-210ENST00000559550 SF3A1Q15459 793 aaKnown RBP5.21□□□□□ -1.58
CASC4-210ENST00000559550 SV2CQ496J9 727 aa5.21□□□□□ -1.58
CASC4-210ENST00000559550 CEP128Q6ZU80 1094 aa5.21□□□□□ -1.58
CASC4-210ENST00000559550 OXR1Q8N573 874 aa5.21□□□□□ -1.58
CASC4-210ENST00000559550 ANKS4BQ8N8V4 417 aa5.21□□□□□ -1.58
CASC4-210ENST00000559550 SYT8Q8NBV8 401 aa5.21□□□□□ -1.58
CASC4-210ENST00000559550 ARMC5Q96C12 935 aa5.21□□□□□ -1.58
CASC4-210ENST00000559550 SIGLEC10Q96LC7 697 aa5.21□□□□□ -1.58
CASC4-210ENST00000559550 PLCD4Q9BRC7 762 aa5.21□□□□□ -1.58
CASC4-210ENST00000559550 TNFRSF10DQ9UBN6 386 aa5.21□□□□□ -1.58
CASC4-210ENST00000559550 PPP1R1BQ9UD71 204 aaPredicted RBP5.21□□□□□ -1.58
CASC4-210ENST00000559550 ZC3H12DA2A288 527 aaKnown RBP5.2□□□□□ -1.58
CASC4-210ENST00000559550 KIR2DL1P43626 348 aaPredicted RBP5.2□□□□□ -1.58
CASC4-210ENST00000559550 KIR2DL2P43627 348 aaPredicted RBP5.2□□□□□ -1.58
CASC4-210ENST00000559550 RTP1P59025 263 aa5.2□□□□□ -1.58
CASC4-210ENST00000559550 CHRNEQ04844 493 aa5.2□□□□□ -1.58
CASC4-210ENST00000559550 CYP4F3Q08477 520 aa5.2□□□□□ -1.58
CASC4-210ENST00000559550 SERINC3Q13530 473 aa5.2□□□□□ -1.58
CASC4-210ENST00000559550 VMACQ2NL98 169 aa5.2□□□□□ -1.58
CASC4-210ENST00000559550 GTF2IRD2BQ6EKJ0 949 aa5.2□□□□□ -1.58
CASC4-210ENST00000559550 RCSD1Q6JBY9 416 aa5.2□□□□□ -1.58
CASC4-210ENST00000559550 EEPD1Q7L9B9 569 aa5.2□□□□□ -1.58
CASC4-210ENST00000559550 SLCO6A1Q86UG4 719 aa5.2□□□□□ -1.58
CASC4-210ENST00000559550 GTF2IRD2Q86UP8 949 aa5.2□□□□□ -1.58
CASC4-210ENST00000559550 SPPL2CQ8IUH8 684 aa5.2□□□□□ -1.58
CASC4-210ENST00000559550 TRIM59Q8IWR1 403 aa5.2□□□□□ -1.58
CASC4-210ENST00000559550 NAT16Q8N8M0 369 aa5.2□□□□□ -1.58
CASC4-210ENST00000559550 PTCHD1Q96NR3 888 aa5.2□□□□□ -1.58
CASC4-210ENST00000559550 DNAJC2Q99543 621 aaKnown RBP5.2□□□□□ -1.58
CASC4-210ENST00000559550 MSRB2Q9Y3D2 182 aa5.2□□□□□ -1.58
CASC4-210ENST00000559550 C2orf71A6NGG8 1288 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 CCDC85CA6NKD9 419 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 OVOL3O00110 214 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 NOP56O00567 594 aaKnown RBP5.19□□□□□ -1.58
CASC4-210ENST00000559550 NRDCO43847 1150 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 CAPNS1P04632 268 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 ENDOUP21128 410 aaKnown RBP5.19□□□□□ -1.58
CASC4-210ENST00000559550 GRIA2P42262 883 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 NOP2P46087 812 aaKnown RBP5.19□□□□□ -1.58
CASC4-210ENST00000559550 SF1Q15637 639 aaKnown RBP5.19□□□□□ -1.58
CASC4-210ENST00000559550 HSF5Q4G112 596 aaPredicted RBP5.19□□□□□ -1.58
CASC4-210ENST00000559550 NBPF6Q5VWK0 638 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 HHIPL2Q6UWX4 724 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 NLRX1Q86UT6 975 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 SIRT2Q8IXJ6 389 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 BTN2A2Q8WVV5 523 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 NBPF4Q96M43 638 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 JMJD8Q96S16 334 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 LRP2BPQ9P2M1 347 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 GPR160Q9UJ42 338 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 BACE2Q9Y5Z0 518 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 IRAK3Q9Y616 596 aa5.19□□□□□ -1.58
CASC4-210ENST00000559550 IRS4O14654 1257 aaPredicted RBP5.18□□□□□ -1.58
CASC4-210ENST00000559550 PDE6BP35913 854 aa5.18□□□□□ -1.58
CASC4-210ENST00000559550 SEPHS1P49903 392 aa5.18□□□□□ -1.58
CASC4-210ENST00000559550 EPHB3P54753 998 aa5.18□□□□□ -1.58
CASC4-210ENST00000559550 PLP2Q04941 152 aa5.18□□□□□ -1.58
CASC4-210ENST00000559550 SCRN1Q12765 414 aa5.18□□□□□ -1.58
CASC4-210ENST00000559550 SLC14A2Q15849 920 aa5.18□□□□□ -1.58
CASC4-210ENST00000559550 EEF1DP3Q658K8 133 aa5.18□□□□□ -1.58
CASC4-210ENST00000559550 POMZP3Q6PJE2 187 aa5.18□□□□□ -1.58
CASC4-210ENST00000559550 FRMD5Q7Z6J6 570 aa5.18□□□□□ -1.58
CASC4-210ENST00000559550 SP8Q8IXZ3 490 aa5.18□□□□□ -1.58
CASC4-210ENST00000559550 TMEFF1Q8IYR6 380 aa5.18□□□□□ -1.58
CASC4-210ENST00000559550 COPS5Q92905 334 aa5.18□□□□□ -1.58
CASC4-210ENST00000559550 HIRIP3Q9BW71 556 aaPredicted RBP5.18□□□□□ -1.58
CASC4-210ENST00000559550 EPN3Q9H201 632 aa5.18□□□□□ -1.58
CASC4-210ENST00000559550 NKX2-4Q9H2Z4 354 aa5.18□□□□□ -1.58
CASC4-210ENST00000559550 LUC7LQ9NQ29 371 aaKnown RBP5.18□□□□□ -1.58
CASC4-210ENST00000559550 GPRC5CQ9NQ84 441 aa5.18□□□□□ -1.58
CASC4-210ENST00000559550 A0A1W2PQ45 241 aaPredicted RBP5.17□□□□□ -1.58
CASC4-210ENST00000559550 A0A1W2PQU0 124 aa5.17□□□□□ -1.58
CASC4-210ENST00000559550 A0A1W2PQY0 241 aa5.17□□□□□ -1.58
CASC4-210ENST00000559550 FAM221BA6H8Z2 402 aa5.17□□□□□ -1.58
CASC4-210ENST00000559550 U2SURPO15042 1029 aaKnown RBP5.17□□□□□ -1.58
CASC4-210ENST00000559550 MSL3P1P0C860 447 aa5.17□□□□□ -1.58
CASC4-210ENST00000559550 TNFRSF1AP19438 455 aa5.17□□□□□ -1.58
CASC4-210ENST00000559550 PPP2R2AP63151 447 aa5.17□□□□□ -1.58
CASC4-210ENST00000559550 SNX17Q15036 470 aa5.17□□□□□ -1.58
CASC4-210ENST00000559550 MBLAC2Q68D91 279 aa5.17□□□□□ -1.58
CASC4-210ENST00000559550 CYP2R1Q6VVX0 501 aa5.17□□□□□ -1.58
CASC4-210ENST00000559550 SPATC1Q76KD6 591 aa5.17□□□□□ -1.58
CASC4-210ENST00000559550 CRACR2BQ8N4Y2 399 aaPredicted RBP5.17□□□□□ -1.58
CASC4-210ENST00000559550 PMFBP1Q8TBY8 1022 aa5.17□□□□□ -1.58
CASC4-210ENST00000559550 BDH2Q9BUT1 245 aa5.17□□□□□ -1.58
CASC4-210ENST00000559550 SIRPGQ9P1W8 387 aa5.17□□□□□ -1.58
CASC4-210ENST00000559550 IMPACTQ9P2X3 320 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms