RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 HAUS8Q9BT25 410 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 KIAA1468Q9P260 1216 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 DNAJC8O75937 253 aaPredicted RBP15.22■□□□□ 0.03
SPG11-210ENST00000558319 CXCR5P32302 372 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 POLR2FP61218 127 aaKnown RBP15.22■□□□□ 0.03
SPG11-210ENST00000558319 RASSF7Q02833 373 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 EHHADHQ08426 723 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 TMEM259Q4ZIN3 620 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 CDC26Q8NHZ8 85 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 DCPSQ96C86 337 aaKnown RBP15.22■□□□□ 0.03
SPG11-210ENST00000558319 CCDC138Q96M89 665 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 F5H423 210 aaPredicted RBP15.22■□□□□ 0.03
SPG11-210ENST00000558319 EEF1DP29692 281 aaKnown RBP15.22■□□□□ 0.03
SPG11-210ENST00000558319 ANKRD20A4Q4UJ75 823 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 ANKRD20A8PQ5CZ79 823 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 ANKRD20A2Q5SQ80 823 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 ANKRD20A1Q5TYW2 823 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 KLHL29Q96CT2 875 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 PSTPIP2Q9H939 334 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 ZBTB7BO15156 539 aaPredicted RBP15.22■□□□□ 0.03
SPG11-210ENST00000558319 TTC4O95801 387 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 BTDP43251 543 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 POLGP54098 1239 aaPredicted RBP15.22■□□□□ 0.03
SPG11-210ENST00000558319 ME3Q16798 604 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 LPIN2Q92539 896 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 SYNDIG1LA6NDD5 238 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 GNGT2O14610 69 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 MAP3K7O43318 606 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 SLCO1A2P46721 670 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 PLCB4Q15147 1175 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 TSC22D3Q99576 134 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 TBK1Q9UHD2 729 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 G3BP2Q9UN86 482 aaKnown RBP15.22■□□□□ 0.03
SPG11-210ENST00000558319 WDR91A4D1P6 747 aa15.22■□□□□ 0.03
SPG11-210ENST00000558319 HNRNPH2P55795 449 aaKnown RBP15.22■□□□□ 0.03
SPG11-210ENST00000558319 CERKLQ49MI3 558 aaPredicted RBP15.21■□□□□ 0.03
SPG11-210ENST00000558319 RSBN1LQ6PCB5 846 aaPredicted RBP15.21■□□□□ 0.03
SPG11-210ENST00000558319 SMYD4Q8IYR2 804 aaPredicted RBP15.21■□□□□ 0.03
SPG11-210ENST00000558319 REXO1Q8N1G1 1221 aaKnown RBP15.21■□□□□ 0.03
SPG11-210ENST00000558319 TMEM87BQ96K49 555 aa15.21■□□□□ 0.03
SPG11-210ENST00000558319 EPB41L5Q9HCM4 733 aa15.21■□□□□ 0.03
SPG11-210ENST00000558319 DDX25Q9UHL0 483 aaKnown RBP15.21■□□□□ 0.03
SPG11-210ENST00000558319 UHRF1BP1LA0JNW5 1464 aa15.21■□□□□ 0.03
SPG11-210ENST00000558319 TMEM232C9JQI7 657 aa15.21■□□□□ 0.03
SPG11-210ENST00000558319 STAT1P42224 750 aa15.21■□□□□ 0.03
SPG11-210ENST00000558319 MYSM1Q5VVJ2 828 aa15.21■□□□□ 0.03
SPG11-210ENST00000558319 HAUS1Q96CS2 278 aa15.21■□□□□ 0.03
SPG11-210ENST00000558319 THOC1Q96FV9 657 aaKnown RBP15.21■□□□□ 0.03
SPG11-210ENST00000558319 YIPF3Q9GZM5 350 aa15.21■□□□□ 0.03
SPG11-210ENST00000558319 PTH1RQ03431 593 aa15.21■□□□□ 0.03
SPG11-210ENST00000558319 ZNF449Q6P9G9 518 aa15.21■□□□□ 0.03
SPG11-210ENST00000558319 GRK7Q8WTQ7 553 aa15.21■□□□□ 0.03
SPG11-210ENST00000558319 POLIQ9UNA4 740 aa15.21■□□□□ 0.03
SPG11-210ENST00000558319 TOP2BQ02880 1626 aa15.21■□□□□ 0.03
SPG11-210ENST00000558319 LRRC41Q15345 812 aa15.21■□□□□ 0.03
SPG11-210ENST00000558319 TMTC3Q6ZXV5 915 aa15.21■□□□□ 0.03
SPG11-210ENST00000558319 KRT82Q9NSB4 513 aa15.21■□□□□ 0.03
SPG11-210ENST00000558319 DPP9Q86TI2 863 aa15.21■□□□□ 0.02
SPG11-210ENST00000558319 GJA10Q969M2 543 aa15.21■□□□□ 0.02
SPG11-210ENST00000558319 TEKT1Q969V4 418 aa15.21■□□□□ 0.02
SPG11-210ENST00000558319 IL9RQ01113 521 aa15.2■□□□□ 0.02
SPG11-210ENST00000558319 TMED2Q15363 201 aa15.2■□□□□ 0.02
SPG11-210ENST00000558319 ESRRGP62508 458 aa15.2■□□□□ 0.02
SPG11-210ENST00000558319 RAPH1Q70E73 1250 aa15.2■□□□□ 0.02
SPG11-210ENST00000558319 TRIM56Q9BRZ2 755 aaKnown RBP15.2■□□□□ 0.02
SPG11-210ENST00000558319 CCPG1Q9ULG6 757 aa15.2■□□□□ 0.02
SPG11-210ENST00000558319 ATP8A1Q9Y2Q0 1164 aa15.2■□□□□ 0.02
SPG11-210ENST00000558319 ECE1P42892 770 aa15.2■□□□□ 0.02
SPG11-210ENST00000558319 CTSWP56202 376 aa15.2■□□□□ 0.02
SPG11-210ENST00000558319 TRMT10CQ7L0Y3 403 aaKnown RBP15.2■□□□□ 0.02
SPG11-210ENST00000558319 OTUD6AQ7L8S5 288 aa15.2■□□□□ 0.02
SPG11-210ENST00000558319 CCDC84Q86UT8 332 aaPredicted RBP15.2■□□□□ 0.02
SPG11-210ENST00000558319 SCHIP1Q9P0W5 487 aaPredicted RBP15.2■□□□□ 0.02
SPG11-210ENST00000558319 SCINQ9Y6U3 715 aa15.2■□□□□ 0.02
SPG11-210ENST00000558319 ADD1P35611 737 aaKnown RBP15.2■□□□□ 0.02
SPG11-210ENST00000558319 SPC25Q9HBM1 224 aa15.2■□□□□ 0.02
SPG11-210ENST00000558319 CLIC2O15247 247 aa15.2■□□□□ 0.02
SPG11-210ENST00000558319 CCDC51Q96ER9 411 aa15.2■□□□□ 0.02
SPG11-210ENST00000558319 ZNF496Q96IT1 587 aaPredicted RBP15.2■□□□□ 0.02
SPG11-210ENST00000558319 YY1AP1Q9H869 796 aa15.2■□□□□ 0.02
SPG11-210ENST00000558319 A0A087WUV0 522 aaPredicted RBP15.19■□□□□ 0.02
SPG11-210ENST00000558319 ADORA1P30542 326 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 RANBP1P43487 201 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 YWHAGP61981 247 aaKnown RBP eCLIP15.19■□□□□ 0.02
SPG11-210ENST00000558319 SLC7A5Q01650 507 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 HIBCHQ6NVY1 386 aaPredicted RBP15.19■□□□□ 0.02
SPG11-210ENST00000558319 MARCH10Q8NA82 808 aaPredicted RBP15.19■□□□□ 0.02
SPG11-210ENST00000558319 ASPHQ12797 758 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 GCKRQ14397 625 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 SCARA5Q6ZMJ2 495 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 DYDC2Q96IM9 177 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 PDHA1P08559 390 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 DYNLL1P63167 89 aaKnown RBP15.19■□□□□ 0.02
SPG11-210ENST00000558319 USPL1Q5W0Q7 1092 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 KRT25Q7Z3Z0 450 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 C7orf31Q8N865 590 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 PI4K2BQ8TCG2 481 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 RALGAPBQ86X10 1494 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 RAD17O75943 681 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 UBN1Q9NPG3 1134 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms