RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 CHD9Q3L8U1 2897 aa12.65□□□□□ -0.38
HNRNPC-230ENST00000557201 B4GALT4O60513 344 aa12.65□□□□□ -0.38
HNRNPC-230ENST00000557201 DUSP28Q4G0W2 176 aa12.65□□□□□ -0.38
HNRNPC-230ENST00000557201 NOL8Q76FK4 1167 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-230ENST00000557201 EEPD1Q7L9B9 569 aa12.65□□□□□ -0.38
HNRNPC-230ENST00000557201 EVI5LQ96CN4 794 aa12.65□□□□□ -0.38
HNRNPC-230ENST00000557201 AP5M1Q9H0R1 490 aa12.65□□□□□ -0.38
HNRNPC-230ENST00000557201 TRPV6Q9H1D0 765 aa12.65□□□□□ -0.38
HNRNPC-230ENST00000557201 WNT8AQ9H1J5 351 aa12.65□□□□□ -0.38
HNRNPC-230ENST00000557201 HIPK3Q9H422 1215 aa12.65□□□□□ -0.38
HNRNPC-230ENST00000557201 HELLSQ9NRZ9 838 aa12.65□□□□□ -0.38
HNRNPC-230ENST00000557201 TCP11L1Q9NUJ3 509 aa12.65□□□□□ -0.38
HNRNPC-230ENST00000557201 CCPG1Q9ULG6 757 aa12.65□□□□□ -0.38
HNRNPC-230ENST00000557201 ISY1Q9ULR0 285 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-230ENST00000557201 LOC102724159A0A0B4J2E5 919 aa12.64□□□□□ -0.39
HNRNPC-230ENST00000557201 RBM47A0AV96 593 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-230ENST00000557201 NFIBO00712 420 aa12.64□□□□□ -0.39
HNRNPC-230ENST00000557201 RANBP6O60518 1105 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-230ENST00000557201 FGAP02671 866 aa12.64□□□□□ -0.39
HNRNPC-230ENST00000557201 PDE1AP54750 535 aa12.64□□□□□ -0.39
HNRNPC-230ENST00000557201 PSMC6P62333 389 aa12.64□□□□□ -0.39
HNRNPC-230ENST00000557201 BAATQ14032 418 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-230ENST00000557201 ADGRE1Q14246 886 aa12.64□□□□□ -0.39
HNRNPC-230ENST00000557201 PWP2Q15269 919 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-230ENST00000557201 NSMFQ6X4W1 530 aa12.64□□□□□ -0.39
HNRNPC-230ENST00000557201 TICAM2Q86XR7 235 aa12.64□□□□□ -0.39
HNRNPC-230ENST00000557201 CLEC4DQ8WXI8 215 aa12.64□□□□□ -0.39
HNRNPC-230ENST00000557201 TMEM47Q9BQJ4 181 aa12.64□□□□□ -0.39
HNRNPC-230ENST00000557201 OSBPL3Q9H4L5 887 aa12.64□□□□□ -0.39
HNRNPC-230ENST00000557201 ZMYM6O95789 1325 aa12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 A0A0D9SFI3 127 aa12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 ZEB2O60315 1214 aa12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 FGBP02675 491 aa12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 SNHG28P0DPA3 235 aa12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 TOP1P11387 765 aaKnown RBP12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 SLC16A2P36021 539 aa12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 ALDH5A1P51649 535 aaPredicted RBP12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 CCDC96Q2M329 555 aa12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 AKNAD1Q5T1N1 836 aa12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 SYDE2Q5VT97 1194 aa12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 KIAA1211Q6ZU35 1233 aa12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 PLEKHM2Q8IWE5 1019 aa12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 FAM227BQ96M60 508 aa12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 ALDH8A1Q9H2A2 487 aaPredicted RBP12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 PRDM6Q9NQX0 595 aa12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 SSUH2Q9Y2M2 353 aa12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 YBX2Q9Y2T7 364 aaKnown RBP12.63□□□□□ -0.39
HNRNPC-230ENST00000557201 CHD7Q9P2D1 2997 aa12.62□□□□□ -0.39
HNRNPC-230ENST00000557201 HSPD1P10809 573 aaKnown RBP12.62□□□□□ -0.39
HNRNPC-230ENST00000557201 PDHBP11177 359 aa12.62□□□□□ -0.39
HNRNPC-230ENST00000557201 EDNRBP24530 442 aa12.62□□□□□ -0.39
HNRNPC-230ENST00000557201 CCL23P55773 120 aa12.62□□□□□ -0.39
HNRNPC-230ENST00000557201 MCMDC2Q4G0Z9 681 aa12.62□□□□□ -0.39
HNRNPC-230ENST00000557201 ZNF589Q86UQ0 364 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-230ENST00000557201 SYMPKQ92797 1274 aaKnown RBP12.62□□□□□ -0.39
HNRNPC-230ENST00000557201 WDR11Q9BZH6 1224 aa12.62□□□□□ -0.39
HNRNPC-230ENST00000557201 PRDM12Q9H4Q4 367 aa12.62□□□□□ -0.39
HNRNPC-230ENST00000557201 ADD3Q9UEY8 706 aaKnown RBP12.62□□□□□ -0.39
HNRNPC-230ENST00000557201 MTMR7Q9Y216 660 aa12.62□□□□□ -0.39
HNRNPC-230ENST00000557201 FRMPD2Q68DX3 1309 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-230ENST00000557201 PDE4AP27815 886 aa12.61□□□□□ -0.39
HNRNPC-230ENST00000557201 PURAQ00577 322 aaKnown RBP12.61□□□□□ -0.39
HNRNPC-230ENST00000557201 ZNF543Q08ER8 600 aa12.61□□□□□ -0.39
HNRNPC-230ENST00000557201 RAB30Q15771 203 aa12.61□□□□□ -0.39
HNRNPC-230ENST00000557201 TJAP1Q5JTD0 557 aa12.61□□□□□ -0.39
HNRNPC-230ENST00000557201 SLC30A10Q6XR72 485 aa12.61□□□□□ -0.39
HNRNPC-230ENST00000557201 OTOP2Q7RTS6 562 aa12.61□□□□□ -0.39
HNRNPC-230ENST00000557201 GPCPD1Q9NPB8 672 aa12.61□□□□□ -0.39
HNRNPC-230ENST00000557201 WDR19Q8NEZ3 1342 aa12.61□□□□□ -0.39
HNRNPC-230ENST00000557201 SCLYQ96I15 445 aa12.6□□□□□ -0.39
HNRNPC-230ENST00000557201 TTC14Q96N46 770 aa12.6□□□□□ -0.39
HNRNPC-230ENST00000557201 GAS2L1Q99501 681 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-230ENST00000557201 MTIF3Q9H2K0 278 aaKnown RBP12.6□□□□□ -0.39
HNRNPC-230ENST00000557201 NKX2-4Q9H2Z4 354 aa12.6□□□□□ -0.39
HNRNPC-230ENST00000557201 TRMT13Q9NUP7 481 aaKnown RBP12.6□□□□□ -0.39
HNRNPC-230ENST00000557201 POLR3EQ9NVU0 708 aa12.6□□□□□ -0.39
HNRNPC-230ENST00000557201 MSRAQ9UJ68 235 aa12.6□□□□□ -0.39
HNRNPC-230ENST00000557201 SCN10AQ9Y5Y9 1956 aa12.59□□□□□ -0.39
HNRNPC-230ENST00000557201 PTPDC1A2A3K4 754 aa12.59□□□□□ -0.39
HNRNPC-230ENST00000557201 PCP11498 1178 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-230ENST00000557201 RPS6P62753 249 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-230ENST00000557201 NMIQ13287 307 aaPredicted RBP12.59□□□□□ -0.39
HNRNPC-230ENST00000557201 RRP12Q5JTH9 1297 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-230ENST00000557201 TBC1D10CQ8IV04 446 aa12.59□□□□□ -0.39
HNRNPC-230ENST00000557201 RPUSD2Q8IZ73 545 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-230ENST00000557201 ATXN2LQ8WWM7 1075 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-230ENST00000557201 PNMA2Q9UL42 364 aa12.59□□□□□ -0.39
HNRNPC-230ENST00000557201 GBF1Q92538 1859 aa12.59□□□□□ -0.39
HNRNPC-230ENST00000557201 TNKSO95271 1327 aa12.59□□□□□ -0.39
HNRNPC-230ENST00000557201 TTC28Q96AY4 2481 aa12.59□□□□□ -0.39
HNRNPC-230ENST00000557201 A6NJR5 290 aa12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 NKRFO15226 690 aaKnown RBP eCLIP12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 SUPT20HL2P0C7V6 817 aa12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 CYP2C9P11712 490 aa12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 MYOGP15173 224 aa12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 CPT1AP50416 773 aa12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 RABGGTBP53611 331 aa12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 HAND2P61296 217 aa12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 RNF207Q6ZRF8 634 aa12.58□□□□□ -0.4
HNRNPC-230ENST00000557201 RGS22Q8NE09 1264 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms