RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 SPATA9Q9BWV2 254 aa6.91□□□□□ -1.3
MTHFD1-206ENST00000554353 RRP7BPQ9NSQ0 103 aa6.91□□□□□ -1.3
MTHFD1-206ENST00000554353 MINPP1Q9UNW1 487 aa6.91□□□□□ -1.3
MTHFD1-206ENST00000554353 AKT3Q9Y243 479 aa6.91□□□□□ -1.3
MTHFD1-206ENST00000554353 ERVK-7P63135 1459 aa6.91□□□□□ -1.3
MTHFD1-206ENST00000554353 CLSTN1O94985 981 aa6.9□□□□□ -1.3
MTHFD1-206ENST00000554353 PRAMEF1O95521 474 aa6.9□□□□□ -1.3
MTHFD1-206ENST00000554353 CEACAM5P06731 702 aa6.9□□□□□ -1.3
MTHFD1-206ENST00000554353 ITGAVP06756 1048 aa6.9□□□□□ -1.3
MTHFD1-206ENST00000554353 SDE2Q6IQ49 451 aa6.9□□□□□ -1.3
MTHFD1-206ENST00000554353 ZDHHC13Q8IUH4 622 aa6.9□□□□□ -1.3
MTHFD1-206ENST00000554353 LRRC47Q8N1G4 583 aaKnown RBP6.9□□□□□ -1.3
MTHFD1-206ENST00000554353 NLGN1Q8N2Q7 840 aa6.9□□□□□ -1.3
MTHFD1-206ENST00000554353 FIBCD1Q8N539 461 aa6.9□□□□□ -1.3
MTHFD1-206ENST00000554353 PIWIL2Q8TC59 973 aaKnown RBP6.9□□□□□ -1.3
MTHFD1-206ENST00000554353 ZNF669Q96BR6 464 aaPredicted RBP6.9□□□□□ -1.3
MTHFD1-206ENST00000554353 YTHDC1Q96MU7 727 aaKnown RBP6.9□□□□□ -1.3
MTHFD1-206ENST00000554353 KANSL2Q9H9L4 492 aa6.9□□□□□ -1.3
MTHFD1-206ENST00000554353 CHST7Q9NS84 486 aa6.9□□□□□ -1.3
MTHFD1-206ENST00000554353 PIM2Q9P1W9 311 aa6.9□□□□□ -1.3
MTHFD1-206ENST00000554353 FHOD1Q9Y613 1164 aa6.9□□□□□ -1.3
MTHFD1-206ENST00000554353 ABCC5O15440 1437 aa6.9□□□□□ -1.31
MTHFD1-206ENST00000554353 A0A1W2PQU0 124 aa6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 SHISA3A0PJX4 238 aa6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 SIGLEC6O43699 453 aa6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 CPSF6Q16630 551 aaKnown RBP eCLIP6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 NKPD1Q17RQ9 610 aa6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 TICAM2Q86XR7 235 aa6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 PLD6Q8N2A8 252 aaKnown RBP6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 ZNF513Q8N8E2 541 aaPredicted RBP6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 BVESQ8NE79 360 aa6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 SYTL5Q8TDW5 730 aaPredicted RBP6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 HSPA12BQ96MM6 686 aa6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 ZDHHC15Q96MV8 337 aa6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 SEMA6BQ9H3T3 888 aa6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 GOLGA2P5Q9HBQ8 144 aa6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 ZSWIM5Q9P217 1185 aa6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 KIF15Q9NS87 1388 aa6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 XIRP1Q702N8 1843 aaKnown RBP6.89□□□□□ -1.31
MTHFD1-206ENST00000554353 PIK3C2BO00750 1634 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 ALKQ9UM73 1620 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 DAPK1P53355 1430 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 A0A087WZG4 1122 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 PRR19A6NJB7 356 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 H3BS24 57 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 FAM153BP0C7A2 387 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 LTKP29376 864 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 C2orf27AQ580R0 203 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 POMZP3Q6PJE2 187 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 ZNF227Q86WZ6 799 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 SPACA3Q8IXA5 215 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 NETO1Q8TDF5 533 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 THAP3Q8WTV1 239 aaPredicted RBP6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 SGSM3Q96HU1 749 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 RCC1LQ96I51 464 aaKnown RBP6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 GPR62Q9BZJ7 368 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 TRIT1Q9H3H1 467 aaKnown RBP6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 MKNK2Q9HBH9 465 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 GPATCH2Q9NW75 528 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 CGGBP1Q9UFW8 167 aaPredicted RBP6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 PLAGL2Q9UPG8 496 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 ST14Q9Y5Y6 855 aa6.88□□□□□ -1.31
MTHFD1-206ENST00000554353 PRDM15P57071 1507 aaPredicted RBP6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 LRRC7Q96NW7 1537 aa6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 ERBINQ96RT1 1412 aa6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 ROCK1Q13464 1354 aa6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 ESYT3A0FGR9 886 aa6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 WASH4PA8MWX3 477 aa6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 TBX1O43435 398 aa6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 KCNH1O95259 989 aa6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 TGFB1P01137 390 aa6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 FOSL1P15407 271 aa6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 PPP2R2AP63151 447 aa6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 HSP90AA2PQ14568 343 aaPredicted RBP6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 IFI16Q16666 785 aaKnown RBP6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 PRSS36Q5K4E3 855 aa6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 SLC51AQ86UW1 340 aa6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 ARHGEF39Q8N4T4 335 aa6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 CRACR2BQ8N4Y2 399 aaPredicted RBP6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 UBE2FQ969M7 185 aa6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 DUSP15Q9H1R2 295 aaPredicted RBP6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 PRR13Q9NZ81 148 aa6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 ZC3H7BQ9UGR2 993 aaKnown RBP6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 DIS3Q9Y2L1 958 aaKnown RBP6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 SF3B6Q9Y3B4 125 aaKnown RBP6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 EMC9Q9Y3B6 208 aa6.87□□□□□ -1.31
MTHFD1-206ENST00000554353 SLIT1O75093 1534 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 SCAF11Q99590 1463 aaKnown RBP6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 ARHGAP31Q2M1Z3 1444 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 KANK1Q14678 1352 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 MYO5BQ9ULV0 1848 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 H0Y8X5 98 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 ADCY3O60266 1144 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 VAMP4O75379 141 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 HOXA10P31260 410 aaPredicted RBP6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 CLCN7P51798 805 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 SQSTM1Q13501 440 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 DPY19L1Q2PZI1 675 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 CWF19L1Q69YN2 538 aaKnown RBP6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 CRTC3Q6UUV7 619 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms