RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 FOXP4Q8IVH2 680 aaPredicted RBP12.32□□□□□ -0.44
TUBA1C-209ENST00000552448 MAPKAPK5Q8IW41 473 aa12.32□□□□□ -0.44
TUBA1C-209ENST00000552448 DESI2Q9BSY9 194 aa12.32□□□□□ -0.44
TUBA1C-209ENST00000552448 MKNK2Q9HBH9 465 aa12.32□□□□□ -0.44
TUBA1C-209ENST00000552448 GGA2Q9UJY4 613 aa12.32□□□□□ -0.44
TUBA1C-209ENST00000552448 DDX60LQ5H9U9 1706 aaKnown RBP12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 USP17L3A6NCW0 530 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 USP17L4A6NCW7 530 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 GOLGA6CA6NDK9 693 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 KIF3CO14782 793 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 EIF3HO15372 352 aaKnown RBP eCLIP12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 CLSTN1O94985 981 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 GOLGA6DP0CG33 693 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 SCG2P13521 617 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 VEGFAP15692 232 aaPredicted RBP12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 RHBDL3P58872 404 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 CCDC178Q5BJE1 867 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 MFSD14BQ5SR56 506 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 USP17L1Q7RTZ2 530 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 SLC44A5Q8NCS7 719 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 PNMA1Q8ND90 353 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 EHBP1Q8NDI1 1231 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 SUPT20HQ8NEM7 779 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 PAGR1Q9BTK6 254 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 CAPS2Q9BXY5 557 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 GOLGA6AQ9NYA3 693 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 SAP30BPQ9UHR5 308 aaKnown RBP12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 PCDHA5Q9Y5H7 936 aa12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 BAZ2BQ9UIF8 2168 aaKnown RBP12.31□□□□□ -0.44
TUBA1C-209ENST00000552448 G3V3G9 751 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 WNT7AO00755 349 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 ZEB2O60315 1214 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 MFAP3LO75121 409 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 TSPY3P0CV98 308 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 TSPY8P0CW00 308 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 RASA1P20936 1047 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 CCT5P48643 541 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 LIG3P49916 1009 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 AMPD2Q01433 879 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 GOLGA8FQ08AF8 430 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 GOLGA8DPQ0D2H9 430 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 DCAF8Q5TAQ9 597 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 ISM2Q6H9L7 571 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 PODNQ7Z5L7 613 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 CCDC50Q8IVM0 306 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 TEX11Q8IYF3 940 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 ZNF444Q8N0Y2 327 aaPredicted RBP12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 SLC35F6Q8N357 371 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 CSRNP2Q9H175 543 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 SUGCTQ9HAC7 445 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 GAKO14976 1311 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 FOCADQ5VW36 1801 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 SOWAHDA6NJG2 315 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 SRRM3A6NNA2 597 aaPredicted RBP12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 FOXN1O15353 648 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 POLR2DO15514 142 aaKnown RBP12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 EPB41P11171 864 aaKnown RBP12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 FKBP1AP62942 108 aaKnown RBP12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 DRP2Q13474 957 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 MORC3Q14149 939 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 GRM4Q14833 912 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 CYP26C1Q6V0L0 522 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 RAD9BQ6WBX8 426 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 ZNF662Q6ZS27 426 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 USP49Q70CQ1 688 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 KAT2BQ92831 832 aa12.3□□□□□ -0.44
TUBA1C-209ENST00000552448 FLT1P17948 1338 aa12.29□□□□□ -0.44
TUBA1C-209ENST00000552448 GOLGA6BA6NDN3 693 aa12.29□□□□□ -0.44
TUBA1C-209ENST00000552448 PSMD14O00487 310 aa12.29□□□□□ -0.44
TUBA1C-209ENST00000552448 ADAMTS3O15072 1205 aa12.29□□□□□ -0.44
TUBA1C-209ENST00000552448 BMP15O95972 392 aa12.29□□□□□ -0.44
TUBA1C-209ENST00000552448 SARSP49591 514 aaKnown RBP12.29□□□□□ -0.44
TUBA1C-209ENST00000552448 SKOR1P84550 965 aa12.29□□□□□ -0.44
TUBA1C-209ENST00000552448 WWC2Q6AWC2 1192 aa12.29□□□□□ -0.44
TUBA1C-209ENST00000552448 KCNV1Q6PIU1 500 aa12.29□□□□□ -0.44
TUBA1C-209ENST00000552448 C16orf86Q6ZW13 317 aa12.29□□□□□ -0.44
TUBA1C-209ENST00000552448 STAG2Q8N3U4 1231 aa12.29□□□□□ -0.44
TUBA1C-209ENST00000552448 BCAS4Q8TDM0 211 aa12.29□□□□□ -0.44
TUBA1C-209ENST00000552448 SERTAD1Q9UHV2 236 aa12.29□□□□□ -0.44
TUBA1C-209ENST00000552448 MAD2L2Q9UI95 211 aa12.29□□□□□ -0.44
TUBA1C-209ENST00000552448 SNED1Q8TER0 1413 aa12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 H0YHG0 523 aa12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 PPP1R12AO14974 1030 aaPredicted RBP12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 RIMBP2O15034 1052 aa12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 ACTN4O43707 911 aaKnown RBP12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 BMP6P22004 513 aa12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 PBX1P40424 430 aa12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 CDK8P49336 464 aa12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 NLRP5P59047 1200 aa12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 POSTNQ15063 836 aa12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 SLC35G1Q2M3R5 365 aa12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 SPATA1Q5VX52 437 aa12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 TRAPPC11Q7Z392 1133 aa12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 OTUD6BQ8N6M0 293 aa12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 C7orf43Q8WVR3 580 aa12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 FERMT2Q96AC1 680 aa12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 TMEM47Q9BQJ4 181 aa12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 IRX2Q9BZI1 471 aaPredicted RBP12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 HAUS4Q9H6D7 363 aa12.28□□□□□ -0.44
TUBA1C-209ENST00000552448 ZNF287Q9HBT7 754 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms