RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 SLKQ9H2G2 1235 aaPredicted RBP17.27■□□□□ 0.36
GPN3-206ENST00000549963 V9GY48 417 aaPredicted RBP17.27■□□□□ 0.36
GPN3-206ENST00000549963 GCOM1H8Y6P7 765 aaPredicted RBP17.26■□□□□ 0.35
GPN3-206ENST00000549963 MSCO60682 206 aa17.26■□□□□ 0.35
GPN3-206ENST00000549963 TFRCP02786 760 aaKnown RBP17.26■□□□□ 0.35
GPN3-206ENST00000549963 POLR2MP0CAP2 368 aa17.26■□□□□ 0.35
GPN3-206ENST00000549963 TAL1P17542 331 aaPredicted RBP17.26■□□□□ 0.35
GPN3-206ENST00000549963 CDC27P30260 824 aa17.26■□□□□ 0.35
GPN3-206ENST00000549963 CCT2P78371 535 aaKnown RBP17.26■□□□□ 0.35
GPN3-206ENST00000549963 SLC35G1Q2M3R5 365 aa17.26■□□□□ 0.35
GPN3-206ENST00000549963 hCG_1984214I3L0E3 225 aa17.25■□□□□ 0.35
GPN3-206ENST00000549963 PPP1R11O60927 126 aaPredicted RBP17.25■□□□□ 0.35
GPN3-206ENST00000549963 SGPL1O95470 568 aa17.25■□□□□ 0.35
GPN3-206ENST00000549963 AK2P54819 239 aa17.25■□□□□ 0.35
GPN3-206ENST00000549963 STK3Q13188 491 aa17.25■□□□□ 0.35
GPN3-206ENST00000549963 TRIM22Q8IYM9 498 aa17.25■□□□□ 0.35
GPN3-206ENST00000549963 ZNF713Q8N859 430 aaPredicted RBP17.25■□□□□ 0.35
GPN3-206ENST00000549963 DEFB118Q96PH6 123 aa17.25■□□□□ 0.35
GPN3-206ENST00000549963 LARP6Q9BRS8 491 aaKnown RBP17.25■□□□□ 0.35
GPN3-206ENST00000549963 ABHD16BQ9H3Z7 469 aa17.25■□□□□ 0.35
GPN3-206ENST00000549963 PAK6Q9NQU5 681 aaPredicted RBP17.25■□□□□ 0.35
GPN3-206ENST00000549963 FAM217BQ9NTX9 383 aaPredicted RBP17.25■□□□□ 0.35
GPN3-206ENST00000549963 NID2Q14112 1375 aa17.25■□□□□ 0.35
GPN3-206ENST00000549963 SOWAHBA6NEL2 793 aa17.24■□□□□ 0.35
GPN3-206ENST00000549963 CDKL5O76039 1030 aa17.24■□□□□ 0.35
GPN3-206ENST00000549963 IGHA2P01877 340 aa17.24■□□□□ 0.35
GPN3-206ENST00000549963 GJA8P48165 433 aa17.24■□□□□ 0.35
GPN3-206ENST00000549963 SOX10P56693 466 aa17.24■□□□□ 0.35
GPN3-206ENST00000549963 SSRP1Q08945 709 aaKnown RBP17.24■□□□□ 0.35
GPN3-206ENST00000549963 IFFO2Q5TF58 517 aa17.24■□□□□ 0.35
GPN3-206ENST00000549963 SLC30A10Q6XR72 485 aa17.24■□□□□ 0.35
GPN3-206ENST00000549963 ARMCX2Q7L311 632 aa17.24■□□□□ 0.35
GPN3-206ENST00000549963 HEATR3Q7Z4Q2 680 aa17.24■□□□□ 0.35
GPN3-206ENST00000549963 NSUN6Q8TEA1 469 aaKnown RBP17.24■□□□□ 0.35
GPN3-206ENST00000549963 BACH2Q9BYV9 841 aa17.24■□□□□ 0.35
GPN3-206ENST00000549963 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.24■□□□□ 0.35
GPN3-206ENST00000549963 KIAA0100Q14667 2235 aaKnown RBP17.24■□□□□ 0.35
GPN3-206ENST00000549963 CNTNAP5Q8WYK1 1306 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 RBBP6Q7Z6E9 1792 aaKnown RBP17.23■□□□□ 0.35
GPN3-206ENST00000549963 hCG_1642624A0A1W2PR95 340 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 SEPT4O43236 478 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 PRPF3O43395 683 aaKnown RBP17.23■□□□□ 0.35
GPN3-206ENST00000549963 CYBAP13498 195 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 IFNAR1P17181 557 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 CCND3P30281 292 aaPredicted RBP17.23■□□□□ 0.35
GPN3-206ENST00000549963 ALDH5A1P51649 535 aaPredicted RBP17.23■□□□□ 0.35
GPN3-206ENST00000549963 HSD17B4P51659 736 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 PDE4DQ08499 809 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 FUT2Q10981 343 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 RABEP1Q15276 862 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 PRAMEF19Q5SWL8 479 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 ARHGEF16Q5VV41 709 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 SMARCC2Q8TAQ2 1214 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 SYTL5Q8TDW5 730 aaPredicted RBP17.23■□□□□ 0.35
GPN3-206ENST00000549963 U2AF1L4Q8WU68 220 aaKnown RBP17.23■□□□□ 0.35
GPN3-206ENST00000549963 CCDC12Q8WUD4 166 aaPredicted RBP17.23■□□□□ 0.35
GPN3-206ENST00000549963 TBC1D5Q92609 795 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 IWS1Q96ST2 819 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 RMDN3Q96TC7 470 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 RNF26Q9BY78 433 aaPredicted RBP17.23■□□□□ 0.35
GPN3-206ENST00000549963 GLT8D2Q9H1C3 349 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 PSTPIP2Q9H939 334 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 FAM184BQ9ULE4 1060 aa17.23■□□□□ 0.35
GPN3-206ENST00000549963 MCM3APO60318 1980 aa17.22■□□□□ 0.35
GPN3-206ENST00000549963 ST18O60284 1047 aa17.22■□□□□ 0.35
GPN3-206ENST00000549963 SNAI1O95863 264 aaPredicted RBP17.22■□□□□ 0.35
GPN3-206ENST00000549963 NAPAP54920 295 aa17.22■□□□□ 0.35
GPN3-206ENST00000549963 ACVR2BQ13705 512 aa17.22■□□□□ 0.35
GPN3-206ENST00000549963 TEX2Q8IWB9 1127 aa17.22■□□□□ 0.35
GPN3-206ENST00000549963 SLC26A6Q9BXS9 759 aa17.22■□□□□ 0.35
GPN3-206ENST00000549963 NCOA5Q9HCD5 579 aaKnown RBP17.22■□□□□ 0.35
GPN3-206ENST00000549963 DDX20Q9UHI6 824 aaKnown RBP17.22■□□□□ 0.35
GPN3-206ENST00000549963 ZHX1Q9UKY1 873 aaPredicted RBP17.22■□□□□ 0.35
GPN3-206ENST00000549963 TPCN1Q9ULQ1 816 aa17.22■□□□□ 0.35
GPN3-206ENST00000549963 LIMCH1Q9UPQ0 1083 aa17.22■□□□□ 0.35
GPN3-206ENST00000549963 POTEFA5A3E0 1075 aa17.21■□□□□ 0.35
GPN3-206ENST00000549963 PFKFB2O60825 505 aa17.21■□□□□ 0.35
GPN3-206ENST00000549963 SCG2P13521 617 aa17.21■□□□□ 0.35
GPN3-206ENST00000549963 AKR1A1P14550 325 aa17.21■□□□□ 0.35
GPN3-206ENST00000549963 GHRHRQ02643 423 aa17.21■□□□□ 0.35
GPN3-206ENST00000549963 PFKFB3Q16875 520 aaPredicted RBP17.21■□□□□ 0.35
GPN3-206ENST00000549963 PPP1R18Q6NYC8 613 aa17.21■□□□□ 0.35
GPN3-206ENST00000549963 NOL8Q76FK4 1167 aaKnown RBP17.21■□□□□ 0.35
GPN3-206ENST00000549963 ZSCAN31Q96LW9 406 aaPredicted RBP17.21■□□□□ 0.35
GPN3-206ENST00000549963 TAAR1Q96RJ0 339 aa17.21■□□□□ 0.35
GPN3-206ENST00000549963 VTA1Q9NP79 307 aa17.21■□□□□ 0.35
GPN3-206ENST00000549963 HTTP42858 3142 aa17.21■□□□□ 0.35
GPN3-206ENST00000549963 RARBP10826 455 aa17.2■□□□□ 0.34
GPN3-206ENST00000549963 EN2P19622 333 aaPredicted RBP17.2■□□□□ 0.34
GPN3-206ENST00000549963 HOXA13P31271 388 aaPredicted RBP17.2■□□□□ 0.34
GPN3-206ENST00000549963 STXBP2Q15833 593 aa17.2■□□□□ 0.34
GPN3-206ENST00000549963 NTRK3Q16288 839 aa17.2■□□□□ 0.34
GPN3-206ENST00000549963 FCHSD1Q86WN1 690 aa17.2■□□□□ 0.34
GPN3-206ENST00000549963 ARRDC4Q8NCT1 418 aa17.2■□□□□ 0.34
GPN3-206ENST00000549963 TRPV1Q8NER1 839 aa17.2■□□□□ 0.34
GPN3-206ENST00000549963 MORC4Q8TE76 937 aa17.2■□□□□ 0.34
GPN3-206ENST00000549963 GPKOWQ92917 476 aaPredicted RBP eCLIP17.2■□□□□ 0.34
GPN3-206ENST00000549963 PHKBQ93100 1093 aa17.2■□□□□ 0.34
GPN3-206ENST00000549963 FGD4Q96M96 766 aa17.2■□□□□ 0.34
GPN3-206ENST00000549963 TBC1D32Q96NH3 1257 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 438.5 ms