RNA–Protein interactions for RNA: ENST00000546962.5

TMEM116-204, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-204ENST00000546962 MAP3K12Q12852 859 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 GAS6Q14393 721 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 CWF19L2Q2TBE0 894 aaKnown RBP3.9□□□□□ -1.79
TMEM116-204ENST00000546962 HGSNATQ68CP4 663 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 LLGL2Q6P1M3 1020 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 DDX46Q7L014 1031 aaKnown RBP3.9□□□□□ -1.79
TMEM116-204ENST00000546962 PPP1R42Q7Z4L9 355 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 REC114Q7Z4M0 266 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 UBE2Q1Q7Z7E8 422 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 PDZD3Q86UT5 571 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 FCHSD1Q86WN1 690 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 TDHQ8IZJ6 230 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 REXO1Q8N1G1 1221 aaKnown RBP3.9□□□□□ -1.79
TMEM116-204ENST00000546962 GPR161Q8N6U8 529 aaKnown RBP3.9□□□□□ -1.79
TMEM116-204ENST00000546962 SH3TC2Q8TF17 1288 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 TTC9Q92623 222 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 GAL3ST3Q96A11 431 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 SRPK1Q96SB4 655 aaKnown RBP3.9□□□□□ -1.79
TMEM116-204ENST00000546962 EYA3Q99504 573 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 GDF15Q99988 308 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 EMILIN2Q9BXX0 1053 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 DBNDD1Q9H9R9 158 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 CBX8Q9HC52 389 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 FRRS1LQ9P0K9 344 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.9□□□□□ -1.79
TMEM116-204ENST00000546962 USP16Q9Y5T5 823 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 MRPL42Q9Y6G3 142 aaKnown RBP3.9□□□□□ -1.79
TMEM116-204ENST00000546962 SYNGAP1Q96PV0 1343 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 IRS2Q9Y4H2 1338 aa3.9□□□□□ -1.79
TMEM116-204ENST00000546962 IBTKQ9P2D0 1353 aaPredicted RBP3.89□□□□□ -1.79
TMEM116-204ENST00000546962 ARFGEF2Q9Y6D5 1785 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 BTBD11A6QL63 1104 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 NEURL1BA8MQ27 555 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 IGF2BP3O00425 579 aaKnown RBP eCLIP3.89□□□□□ -1.79
TMEM116-204ENST00000546962 U2SURPO15042 1029 aaKnown RBP3.89□□□□□ -1.79
TMEM116-204ENST00000546962 ECE2O60344 883 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 ARAFP10398 606 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 SELPP16109 830 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 NCLP19338 710 aaKnown RBP3.89□□□□□ -1.79
TMEM116-204ENST00000546962 EPHA1P21709 976 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 CDC27P30260 824 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 CDC25BP30305 580 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 CDK8P49336 464 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 MMP14P50281 582 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 IKBKEQ14164 716 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 RASA3Q14644 834 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 GRIK5Q16478 980 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 HLFQ16534 295 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 MTHFSDQ2M296 383 aaKnown RBP3.89□□□□□ -1.79
TMEM116-204ENST00000546962 PARP10Q53GL7 1025 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 SLC10A5Q5PT55 438 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 FBXW10Q5XX13 1052 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 GDF6Q6KF10 455 aaPredicted RBP3.89□□□□□ -1.79
TMEM116-204ENST00000546962 PSAPL1Q6NUJ1 521 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 KIF6Q6ZMV9 814 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 GK5Q6ZS86 529 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 CELF2-AS1Q8N7Q2 184 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 RBBP8NLQ8NC74 664 aaPredicted RBP3.89□□□□□ -1.79
TMEM116-204ENST00000546962 MAFAQ8NHW3 353 aaPredicted RBP3.89□□□□□ -1.79
TMEM116-204ENST00000546962 U2AF1L4Q8WU68 220 aaKnown RBP3.89□□□□□ -1.79
TMEM116-204ENST00000546962 NUDT8Q8WV74 236 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 SHISA4Q96DD7 197 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 RNPC3Q96LT9 517 aaKnown RBP3.89□□□□□ -1.79
TMEM116-204ENST00000546962 FERD3LQ96RJ6 166 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 CRBNQ96SW2 442 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 C1QTNF1Q9BXJ1 281 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 ZC3H12CQ9C0D7 883 aaKnown RBP3.89□□□□□ -1.79
TMEM116-204ENST00000546962 RNF208Q9H0X6 261 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 EHMT1Q9H9B1 1298 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 MYOZ2Q9NPC6 264 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 ST7Q9NRC1 585 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 CACNA2D2Q9NY47 1150 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 SNTG2Q9NY99 539 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 ANGEL1Q9UNK9 670 aaKnown RBP3.89□□□□□ -1.79
TMEM116-204ENST00000546962 NSFL1CQ9UNZ2 370 aaKnown RBP3.89□□□□□ -1.79
TMEM116-204ENST00000546962 POLR3KQ9Y2Y1 108 aaPredicted RBP3.89□□□□□ -1.79
TMEM116-204ENST00000546962 STARD13Q9Y3M8 1113 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 R3HCC1Q9Y3T6 440 aaKnown RBP3.89□□□□□ -1.79
TMEM116-204ENST00000546962 AKAP11Q9UKA4 1901 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 ASTN2O75129 1339 aaPredicted RBP3.89□□□□□ -1.79
TMEM116-204ENST00000546962 SCN11AQ9UI33 1791 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 ABCC12Q96J65 1359 aa3.89□□□□□ -1.79
TMEM116-204ENST00000546962 ELOA3CA0A087WX78 387 aaPredicted RBP3.88□□□□□ -1.79
TMEM116-204ENST00000546962 ELOA3DA6NLF2 546 aaPredicted RBP3.88□□□□□ -1.79
TMEM116-204ENST00000546962 GNAT3A8MTJ3 354 aa3.88□□□□□ -1.79
TMEM116-204ENST00000546962 SGPL1O95470 568 aa3.88□□□□□ -1.79
TMEM116-204ENST00000546962 TFRCP02786 760 aaKnown RBP3.88□□□□□ -1.79
TMEM116-204ENST00000546962 GSTP1P09211 210 aaKnown RBP3.88□□□□□ -1.79
TMEM116-204ENST00000546962 CCL5P13501 91 aa3.88□□□□□ -1.79
TMEM116-204ENST00000546962 HSD3B2P26439 372 aa3.88□□□□□ -1.79
TMEM116-204ENST00000546962 ADH6P28332 368 aa3.88□□□□□ -1.79
TMEM116-204ENST00000546962 GRK4P32298 578 aa3.88□□□□□ -1.79
TMEM116-204ENST00000546962 PIP4K2AP48426 406 aaPredicted RBP3.88□□□□□ -1.79
TMEM116-204ENST00000546962 RPL6Q02878 288 aaKnown RBP3.88□□□□□ -1.79
TMEM116-204ENST00000546962 GSTM4Q03013 218 aa3.88□□□□□ -1.79
TMEM116-204ENST00000546962 GRAPQ13588 217 aa3.88□□□□□ -1.79
TMEM116-204ENST00000546962 PRKG1Q13976 671 aa3.88□□□□□ -1.79
TMEM116-204ENST00000546962 ELOA3BQ3SY89 546 aa3.88□□□□□ -1.79
TMEM116-204ENST00000546962 TNNI3KQ59H18 835 aa3.88□□□□□ -1.79
TMEM116-204ENST00000546962 PRAMEF18Q5VWM3 479 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms