RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 IL2RBP14784 551 aa15.77■□□□□ 0.12
SRP54-202ENST00000546080 APBA1Q02410 837 aa15.77■□□□□ 0.12
SRP54-202ENST00000546080 GLE1Q53GS7 698 aaKnown RBP15.77■□□□□ 0.12
SRP54-202ENST00000546080 ANKRD40Q6AI12 368 aa15.77■□□□□ 0.12
SRP54-202ENST00000546080 CABS1Q96KC9 395 aa15.77■□□□□ 0.12
SRP54-202ENST00000546080 CCDC43Q96MW1 224 aaKnown RBP15.77■□□□□ 0.12
SRP54-202ENST00000546080 ARHGAP20Q9P2F6 1191 aa15.77■□□□□ 0.12
SRP54-202ENST00000546080 ABCF2Q9UG63 623 aa15.77■□□□□ 0.12
SRP54-202ENST00000546080 PLAGL2Q9UPG8 496 aa15.77■□□□□ 0.12
SRP54-202ENST00000546080 DLEC1Q9Y238 1755 aa15.77■□□□□ 0.11
SRP54-202ENST00000546080 AKR1B10O60218 316 aa15.77■□□□□ 0.11
SRP54-202ENST00000546080 FSBPO95073 299 aa15.77■□□□□ 0.11
SRP54-202ENST00000546080 KRT14P02533 472 aa15.77■□□□□ 0.11
SRP54-202ENST00000546080 ATF3P18847 181 aa15.77■□□□□ 0.11
SRP54-202ENST00000546080 MAP2K2P36507 400 aa15.77■□□□□ 0.11
SRP54-202ENST00000546080 PDE4DQ08499 809 aa15.77■□□□□ 0.11
SRP54-202ENST00000546080 CFAP58Q5T655 872 aa15.77■□□□□ 0.11
SRP54-202ENST00000546080 KDM7AQ6ZMT4 941 aa15.77■□□□□ 0.11
SRP54-202ENST00000546080 ZSCAN29Q8IWY8 852 aaPredicted RBP15.77■□□□□ 0.11
SRP54-202ENST00000546080 IFT20Q8IY31 132 aa15.77■□□□□ 0.11
SRP54-202ENST00000546080 RBM12Q9NTZ6 932 aaKnown RBP15.77■□□□□ 0.11
SRP54-202ENST00000546080 ASAP1Q9ULH1 1129 aa15.77■□□□□ 0.11
SRP54-202ENST00000546080 NCK2O43639 380 aa15.76■□□□□ 0.11
SRP54-202ENST00000546080 PCP11498 1178 aaKnown RBP15.76■□□□□ 0.11
SRP54-202ENST00000546080 HNRNPH3P31942 346 aaKnown RBP15.76■□□□□ 0.11
SRP54-202ENST00000546080 EIF4A3P38919 411 aaKnown RBP15.76■□□□□ 0.11
SRP54-202ENST00000546080 CCDC178Q5BJE1 867 aa15.76■□□□□ 0.11
SRP54-202ENST00000546080 CCDC155Q8N6L0 562 aa15.76■□□□□ 0.11
SRP54-202ENST00000546080 RNPC3Q96LT9 517 aaKnown RBP15.76■□□□□ 0.11
SRP54-202ENST00000546080 FAM205AQ6ZU69 1335 aa15.76■□□□□ 0.11
SRP54-202ENST00000546080 MYO1FO00160 1098 aa15.76■□□□□ 0.11
SRP54-202ENST00000546080 VEGFAP15692 232 aaPredicted RBP15.76■□□□□ 0.11
SRP54-202ENST00000546080 LSP1P33241 339 aa15.76■□□□□ 0.11
SRP54-202ENST00000546080 PPP1R2P41236 205 aa15.76■□□□□ 0.11
SRP54-202ENST00000546080 FNTAP49354 379 aa15.76■□□□□ 0.11
SRP54-202ENST00000546080 CCSER1Q9C0I3 900 aa15.76■□□□□ 0.11
SRP54-202ENST00000546080 EPN3Q9H201 632 aa15.76■□□□□ 0.11
SRP54-202ENST00000546080 CCDC194A0A1B0GVG4 234 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 LCA5LO95447 670 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 MAGEA1P43355 309 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 NAP1L1P55209 391 aaKnown RBP15.75■□□□□ 0.11
SRP54-202ENST00000546080 PAK2Q13177 524 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 CFAP221Q4G0U5 840 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 NAA35Q5VZE5 725 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 RASGRP4Q8TDF6 673 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 CXorf56Q9H5V9 222 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 MAGEF1Q9HAY2 307 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 NR1D1P20393 614 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 ASIC1P78348 528 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 GUCY1A3Q02108 690 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 ZNF473Q8WTR7 871 aaKnown RBP15.75■□□□□ 0.11
SRP54-202ENST00000546080 RIOK1Q9BRS2 568 aaKnown RBP15.75■□□□□ 0.11
SRP54-202ENST00000546080 PAGR1Q9BTK6 254 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 BRIP1Q9BX63 1249 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 TMEM60Q9H2L4 133 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 CUEDC2Q9H467 287 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 PRDM11Q9NQV5 511 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 FAM207AQ9NSI2 230 aaPredicted RBP15.75■□□□□ 0.11
SRP54-202ENST00000546080 TSKSQ9UJT2 592 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 NFU1Q9UMS0 254 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 PCDHA4Q9UN74 947 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 TOGARAM1Q9Y4F4 1720 aa15.75■□□□□ 0.11
SRP54-202ENST00000546080 SHANK3Q9BYB0 1731 aa15.74■□□□□ 0.11
SRP54-202ENST00000546080 STRCQ7RTU9 1775 aa15.74■□□□□ 0.11
SRP54-202ENST00000546080 ZNF233A6NK53 670 aa15.74■□□□□ 0.11
SRP54-202ENST00000546080 NMT2O60551 498 aa15.74■□□□□ 0.11
SRP54-202ENST00000546080 HEXIM1O94992 359 aaKnown RBP15.74■□□□□ 0.11
SRP54-202ENST00000546080 CARSP49589 748 aaKnown RBP15.74■□□□□ 0.11
SRP54-202ENST00000546080 DYNLL1P63167 89 aaKnown RBP15.74■□□□□ 0.11
SRP54-202ENST00000546080 STK4Q13043 487 aa15.74■□□□□ 0.11
SRP54-202ENST00000546080 YTHDF3Q7Z739 585 aaKnown RBP15.74■□□□□ 0.11
SRP54-202ENST00000546080 IFT81Q8WYA0 676 aa15.74■□□□□ 0.11
SRP54-202ENST00000546080 NOX5Q96PH1 765 aa15.74■□□□□ 0.11
SRP54-202ENST00000546080 GDF3Q9NR23 364 aa15.74■□□□□ 0.11
SRP54-202ENST00000546080 PPP1R37O75864 691 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 CLSTN1O94985 981 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 FGRP09769 529 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 PLCG1P19174 1290 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 ATP6V1AP38606 617 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 GUCY2DQ02846 1103 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 VWA3BQ502W6 1294 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 IQCKQ8N0W5 287 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 LRRC15Q8TF66 581 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 GPKOWQ92917 476 aaPredicted RBP eCLIP15.73■□□□□ 0.11
SRP54-202ENST00000546080 MS4A14Q96JA4 679 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 TLR10Q9BXR5 811 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 TRIM9Q9C026 710 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 MMRN2Q9H8L6 949 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 EPB41L5Q9HCM4 733 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 RNF14Q9UBS8 474 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 SIK3Q9Y2K2 1263 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 CICQ96RK0 1608 aaPredicted RBP15.73■□□□□ 0.11
SRP54-202ENST00000546080 EPHB6O15197 1021 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 PJA2O43164 708 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 GLI1P08151 1106 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 FAM153BP0C7A2 387 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 FCER1AP12319 257 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 KIF5BP33176 963 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 DDR1Q08345 913 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 PTGISQ16647 500 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms