RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 ANTXR1Q9H6X2 564 aa6.58□□□□□ -1.36
MDM2-228ENST00000542502 GGT7Q9UJ14 662 aa6.58□□□□□ -1.36
MDM2-228ENST00000542502 PCDHA5Q9Y5H7 936 aa6.58□□□□□ -1.36
MDM2-228ENST00000542502 FGD6Q6ZV73 1430 aa6.58□□□□□ -1.36
MDM2-228ENST00000542502 ARHGEF5Q12774 1597 aa6.57□□□□□ -1.36
MDM2-228ENST00000542502 ABCC1P33527 1531 aa6.57□□□□□ -1.36
MDM2-228ENST00000542502 NUDT19A8MXV4 375 aa6.57□□□□□ -1.36
MDM2-228ENST00000542502 MCM4P33991 863 aa6.57□□□□□ -1.36
MDM2-228ENST00000542502 CRTC3Q6UUV7 619 aa6.57□□□□□ -1.36
MDM2-228ENST00000542502 HS2ST1Q7LGA3 356 aa6.57□□□□□ -1.36
MDM2-228ENST00000542502 LINC01356Q8N9X3 169 aa6.57□□□□□ -1.36
MDM2-228ENST00000542502 NUP43Q8NFH3 380 aa6.57□□□□□ -1.36
MDM2-228ENST00000542502 FEZF2Q8TBJ5 459 aa6.57□□□□□ -1.36
MDM2-228ENST00000542502 PWWP2AQ96N64 755 aa6.57□□□□□ -1.36
MDM2-228ENST00000542502 AP5S1Q9NUS5 200 aa6.57□□□□□ -1.36
MDM2-228ENST00000542502 JAG2Q9Y219 1238 aa6.57□□□□□ -1.36
MDM2-228ENST00000542502 POGZQ7Z3K3 1410 aa6.57□□□□□ -1.36
MDM2-228ENST00000542502 RICTORQ6R327 1708 aa6.56□□□□□ -1.36
MDM2-228ENST00000542502 ZMYM4Q5VZL5 1548 aa6.56□□□□□ -1.36
MDM2-228ENST00000542502 CAMSAP2Q08AD1 1489 aa6.56□□□□□ -1.36
MDM2-228ENST00000542502 MLH3Q9UHC1 1453 aa6.56□□□□□ -1.36
MDM2-228ENST00000542502 MFAP1P55081 439 aaKnown RBP6.56□□□□□ -1.36
MDM2-228ENST00000542502 SKOR2Q2VWA4 1001 aaPredicted RBP6.56□□□□□ -1.36
MDM2-228ENST00000542502 RPTNQ6XPR3 784 aa6.56□□□□□ -1.36
MDM2-228ENST00000542502 SLITRK4Q8IW52 837 aa6.56□□□□□ -1.36
MDM2-228ENST00000542502 TMEM52Q8NDY8 209 aa6.56□□□□□ -1.36
MDM2-228ENST00000542502 SLC9A7Q96T83 725 aa6.56□□□□□ -1.36
MDM2-228ENST00000542502 LUC7LQ9NQ29 371 aaKnown RBP6.56□□□□□ -1.36
MDM2-228ENST00000542502 IMPACTQ9P2X3 320 aa6.56□□□□□ -1.36
MDM2-228ENST00000542502 PTPN23Q9H3S7 1636 aa6.56□□□□□ -1.36
MDM2-228ENST00000542502 RTEL1-TNFRSF6BF6WH68 1400 aa6.56□□□□□ -1.36
MDM2-228ENST00000542502 SAMD9LQ8IVG5 1584 aa6.56□□□□□ -1.36
MDM2-228ENST00000542502 SPAG9O60271 1321 aaKnown RBP6.55□□□□□ -1.36
MDM2-228ENST00000542502 TCOF1Q13428 1488 aaKnown RBP6.55□□□□□ -1.36
MDM2-228ENST00000542502 CCDC141Q6ZP82 1450 aa6.55□□□□□ -1.36
MDM2-228ENST00000542502 BUB1BO60566 1050 aaPredicted RBP6.55□□□□□ -1.36
MDM2-228ENST00000542502 GSNP06396 782 aa6.55□□□□□ -1.36
MDM2-228ENST00000542502 RTP2Q5QGT7 225 aa6.55□□□□□ -1.36
MDM2-228ENST00000542502 ERICH6BQ5W0A0 696 aa6.55□□□□□ -1.36
MDM2-228ENST00000542502 DBX2Q6ZNG2 339 aa6.55□□□□□ -1.36
MDM2-228ENST00000542502 ZDHHC14Q8IZN3 488 aa6.55□□□□□ -1.36
MDM2-228ENST00000542502 SYT8Q8NBV8 401 aa6.55□□□□□ -1.36
MDM2-228ENST00000542502 DHRS1Q96LJ7 313 aa6.55□□□□□ -1.36
MDM2-228ENST00000542502 JMJD8Q96S16 334 aa6.55□□□□□ -1.36
MDM2-228ENST00000542502 NT5C1AQ9BXI3 368 aa6.55□□□□□ -1.36
MDM2-228ENST00000542502 KDM5CP41229 1560 aa6.55□□□□□ -1.36
MDM2-228ENST00000542502 IRS2Q9Y4H2 1338 aa6.54□□□□□ -1.36
MDM2-228ENST00000542502 HECW2Q9P2P5 1572 aa6.54□□□□□ -1.36
MDM2-228ENST00000542502 RAPGEF3O95398 923 aa6.54□□□□□ -1.36
MDM2-228ENST00000542502 CELA3BP08861 270 aa6.54□□□□□ -1.36
MDM2-228ENST00000542502 MAPKAPK2P49137 400 aa6.54□□□□□ -1.36
MDM2-228ENST00000542502 HNRNPMP52272 730 aaKnown RBP eCLIP6.54□□□□□ -1.36
MDM2-228ENST00000542502 NCKAP1LP55160 1127 aa6.54□□□□□ -1.36
MDM2-228ENST00000542502 NR1I3Q14994 352 aa6.54□□□□□ -1.36
MDM2-228ENST00000542502 CCDC27Q2M243 656 aa6.54□□□□□ -1.36
MDM2-228ENST00000542502 PLEKHN1Q494U1 663 aaPredicted RBP6.54□□□□□ -1.36
MDM2-228ENST00000542502 INTS3Q68E01 1043 aaKnown RBP6.54□□□□□ -1.36
MDM2-228ENST00000542502 NKD1Q969G9 470 aa6.54□□□□□ -1.36
MDM2-228ENST00000542502 EAF1Q96JC9 268 aaPredicted RBP6.54□□□□□ -1.36
MDM2-228ENST00000542502 DSCC1Q9BVC3 393 aa6.54□□□□□ -1.36
MDM2-228ENST00000542502 SUCOQ9UBS9 1254 aaKnown RBP6.54□□□□□ -1.36
MDM2-228ENST00000542502 SYCP2Q9BX26 1530 aa6.54□□□□□ -1.36
MDM2-228ENST00000542502 MBD5Q9P267 1494 aa6.53□□□□□ -1.36
MDM2-228ENST00000542502 SHANK2Q9UPX8 1470 aa6.53□□□□□ -1.36
MDM2-228ENST00000542502 MVKQ03426 396 aa6.53□□□□□ -1.36
MDM2-228ENST00000542502 MRPL58Q14197 206 aaKnown RBP6.53□□□□□ -1.36
MDM2-228ENST00000542502 ZC3H14Q6PJT7 736 aaKnown RBP6.53□□□□□ -1.36
MDM2-228ENST00000542502 C7orf61Q8IZ16 206 aa6.53□□□□□ -1.36
MDM2-228ENST00000542502 TEPSINQ96N21 525 aa6.53□□□□□ -1.36
MDM2-228ENST00000542502 SLC12A9Q9BXP2 914 aa6.53□□□□□ -1.36
MDM2-228ENST00000542502 ZFYVE16Q7Z3T8 1539 aa6.53□□□□□ -1.36
MDM2-228ENST00000542502 ATP10AO60312 1499 aa6.53□□□□□ -1.36
MDM2-228ENST00000542502 REREQ9P2R6 1566 aa6.52□□□□□ -1.36
MDM2-228ENST00000542502 MAST1Q9Y2H9 1570 aa6.52□□□□□ -1.36
MDM2-228ENST00000542502 ADGBQ8N7X0 1667 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 RRBP1Q9P2E9 1410 aaKnown RBP6.52□□□□□ -1.37
MDM2-228ENST00000542502 ARHGEF40Q8TER5 1519 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 DNMT1P26358 1616 aaKnown RBP6.52□□□□□ -1.37
MDM2-228ENST00000542502 A0A1W2PQ27 194 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 A0A1W2PQ64 194 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 A0A1W2PQC6 194 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 A0A1W2PQD8 194 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 ZC3H12DA2A288 527 aaKnown RBP6.52□□□□□ -1.37
MDM2-228ENST00000542502 C9IYK1 514 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 SHOXO15266 292 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 GSTM1P09488 218 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 ACRP10323 421 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 IGFBP6P24592 240 aaPredicted RBP6.52□□□□□ -1.37
MDM2-228ENST00000542502 CAP1Q01518 475 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 FAM50AQ14320 339 aaKnown RBP6.52□□□□□ -1.37
MDM2-228ENST00000542502 HLA-DQA1Q5Y7H0 255 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 CWF19L1Q69YN2 538 aaKnown RBP6.52□□□□□ -1.37
MDM2-228ENST00000542502 FRMD5Q7Z6J6 570 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 PRRT2Q7Z6L0 340 aaPredicted RBP6.52□□□□□ -1.37
MDM2-228ENST00000542502 AFAP1Q8N556 730 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 NAT16Q8N8M0 369 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 TP53I13Q8NBR0 393 aaPredicted RBP6.52□□□□□ -1.37
MDM2-228ENST00000542502 RGS22Q8NE09 1264 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 ANKRD30AQ9BXX3 1397 aa6.52□□□□□ -1.37
MDM2-228ENST00000542502 TRAPPC8Q9Y2L5 1435 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms