RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 CBX8Q9HC52 389 aa7.47□□□□□ -1.21
VEGFB-203ENST00000541681 FAM13BQ9NYF5 915 aa7.47□□□□□ -1.21
VEGFB-203ENST00000541681 PI4KBQ9UBF8 816 aa7.47□□□□□ -1.21
VEGFB-203ENST00000541681 CCDC39Q9UFE4 941 aa7.47□□□□□ -1.21
VEGFB-203ENST00000541681 FBXO2Q9UK22 296 aaPredicted RBP7.47□□□□□ -1.21
VEGFB-203ENST00000541681 PNMA3Q9UL41 463 aa7.47□□□□□ -1.21
VEGFB-203ENST00000541681 PCDHA4Q9UN74 947 aa7.47□□□□□ -1.21
VEGFB-203ENST00000541681 GABRQQ9UN88 632 aa7.47□□□□□ -1.21
VEGFB-203ENST00000541681 AGTPBP1Q9UPW5 1226 aa7.47□□□□□ -1.21
VEGFB-203ENST00000541681 AFG3L2Q9Y4W6 797 aa7.47□□□□□ -1.21
VEGFB-203ENST00000541681 PCDHB6Q9Y5E3 794 aa7.47□□□□□ -1.21
VEGFB-203ENST00000541681 PARP14Q460N5 1801 aa7.47□□□□□ -1.21
VEGFB-203ENST00000541681 M0R2N6 131 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 CYTH3O43739 400 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 GDF11O95390 407 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 ADCY5O95622 1261 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 TTLL1O95922 423 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 SNHG28P0DPA3 235 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 BCRP11274 1271 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 SHMT1P34896 483 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 UBXN2AP68543 259 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 SPP2Q13103 211 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 TTC38Q5R3I4 469 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 SLAIN1Q8ND83 568 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 DPF3Q92784 378 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 MKL1Q969V6 931 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 RRP36Q96EU6 259 aaKnown RBP7.46□□□□□ -1.22
VEGFB-203ENST00000541681 CLIC6Q96NY7 704 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 BPIFA3Q9BQP9 254 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 NAT10Q9H0A0 1025 aaKnown RBP7.46□□□□□ -1.22
VEGFB-203ENST00000541681 ZMYND12Q9H0C1 365 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 RNF208Q9H0X6 261 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 BARHL2Q9NY43 387 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 NYAP2Q9P242 653 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 USP25Q9UHP3 1055 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 HOOK1Q9UJC3 728 aaKnown RBP7.46□□□□□ -1.22
VEGFB-203ENST00000541681 TUBE1Q9UJT0 475 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 KCNH3Q9ULD8 1083 aa7.46□□□□□ -1.22
VEGFB-203ENST00000541681 ESYT2A0FGR8 921 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 ESPNB1AK53 854 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 STXBP3O00186 592 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 ADCY3O60266 1144 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 INHAP05111 366 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 PDHBP11177 359 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 AKR1B1P15121 316 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 GNA11P29992 359 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 FLT3LGP49771 235 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 NLRP12P59046 1061 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 IRX3P78415 501 aaPredicted RBP7.45□□□□□ -1.22
VEGFB-203ENST00000541681 ATP2C1P98194 919 aaPredicted RBP7.45□□□□□ -1.22
VEGFB-203ENST00000541681 MTMR2Q13614 643 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 IQCB1Q15051 598 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 ZRSR1Q15695 479 aaKnown RBP7.45□□□□□ -1.22
VEGFB-203ENST00000541681 ZYXQ15942 572 aaKnown RBP7.45□□□□□ -1.22
VEGFB-203ENST00000541681 SHROOM1Q2M3G4 852 aaPredicted RBP7.45□□□□□ -1.22
VEGFB-203ENST00000541681 SLC35G1Q2M3R5 365 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 EARS2Q5JPH6 523 aaKnown RBP7.45□□□□□ -1.22
VEGFB-203ENST00000541681 GPATCH4Q5T3I0 446 aaKnown RBP7.45□□□□□ -1.22
VEGFB-203ENST00000541681 ARL6IP4Q66PJ3 421 aaKnown RBP7.45□□□□□ -1.22
VEGFB-203ENST00000541681 TATDN1Q6P1N9 297 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 KRBA2Q6ZNG9 492 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 ZSCAN30Q86W11 494 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 CEP57L1Q8IYX8 460 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 ZNF280CQ8ND82 737 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 CCDC34Q96HJ3 373 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 FEZ1Q99689 392 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 PYM1Q9BRP8 204 aaKnown RBP7.45□□□□□ -1.22
VEGFB-203ENST00000541681 UNC93B1Q9H1C4 597 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 DNAJC25Q9H1X3 360 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 KANSL2Q9H9L4 492 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 AS3MTQ9HBK9 375 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 C6orf50Q9HD87 102 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 TMOD4Q9NZQ9 345 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 CLIP2Q9UDT6 1046 aa7.45□□□□□ -1.22
VEGFB-203ENST00000541681 CENPFP49454 3210 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 FAM205CA6NFA0 338 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 USP17L5A8MUK1 530 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 H0YGN5 161 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 GOLGA6L19H0YKK7 550 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 LAD1O00515 517 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 FARP2O94887 1054 aaPredicted RBP7.44□□□□□ -1.22
VEGFB-203ENST00000541681 TPM3P06753 285 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 CAP2P40123 477 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 MDM2Q00987 491 aaPredicted RBP7.44□□□□□ -1.22
VEGFB-203ENST00000541681 ZNF543Q08ER8 600 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 PTGDRQ13258 359 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 PABPC4Q13310 644 aaKnown RBP eCLIP7.44□□□□□ -1.225e-7■■□□□ 12.6
VEGFB-203ENST00000541681 ORC2Q13416 577 aaPredicted RBP7.44□□□□□ -1.22
VEGFB-203ENST00000541681 RRP1BQ14684 758 aaKnown RBP7.44□□□□□ -1.22
VEGFB-203ENST00000541681 CERKLQ49MI3 558 aaPredicted RBP7.44□□□□□ -1.22
VEGFB-203ENST00000541681 HABP4Q5JVS0 413 aaKnown RBP7.44□□□□□ -1.22
VEGFB-203ENST00000541681 WWC2Q6AWC2 1192 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 USP17L2Q6R6M4 530 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 SARM1Q6SZW1 724 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 PIK3AP1Q6ZUJ8 805 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 KRT25Q7Z3Z0 450 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.44□□□□□ -1.22
VEGFB-203ENST00000541681 LUZP1Q86V48 1076 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 PROCA1Q8NCQ7 364 aaPredicted RBP7.44□□□□□ -1.22
VEGFB-203ENST00000541681 CNNM3Q8NE01 707 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms