RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 HRKO00198 91 aa5.94□□□□□ -1.46
MDM2-227ENST00000540709 BUB1BO60566 1050 aaPredicted RBP5.94□□□□□ -1.46
MDM2-227ENST00000540709 DBHP09172 617 aa5.94□□□□□ -1.46
MDM2-227ENST00000540709 DNAJA1P31689 397 aaKnown RBP5.94□□□□□ -1.46
MDM2-227ENST00000540709 ETFBP38117 255 aa5.94□□□□□ -1.46
MDM2-227ENST00000540709 NCAPHQ15003 741 aa5.94□□□□□ -1.46
MDM2-227ENST00000540709 PLEKHN1Q494U1 663 aaPredicted RBP5.94□□□□□ -1.46
MDM2-227ENST00000540709 CNKSR3Q6P9H4 555 aa5.94□□□□□ -1.46
MDM2-227ENST00000540709 POMZP3Q6PJE2 187 aa5.94□□□□□ -1.46
MDM2-227ENST00000540709 PAQR3Q6TCH7 311 aa5.94□□□□□ -1.46
MDM2-227ENST00000540709 LZTR1Q8N653 840 aa5.94□□□□□ -1.46
MDM2-227ENST00000540709 BVESQ8NE79 360 aa5.94□□□□□ -1.46
MDM2-227ENST00000540709 GPRC5CQ9NQ84 441 aa5.94□□□□□ -1.46
MDM2-227ENST00000540709 CLEC1BQ9P126 229 aa5.94□□□□□ -1.46
MDM2-227ENST00000540709 B2RBV5 119 aa5.93□□□□□ -1.46
MDM2-227ENST00000540709 CYBBP04839 570 aa5.93□□□□□ -1.46
MDM2-227ENST00000540709 MAPKAPK2P49137 400 aa5.93□□□□□ -1.46
MDM2-227ENST00000540709 AFF3P51826 1226 aaKnown RBP5.93□□□□□ -1.46
MDM2-227ENST00000540709 PRR5P85299 388 aa5.93□□□□□ -1.46
MDM2-227ENST00000540709 ARID5AQ03989 594 aa5.93□□□□□ -1.46
MDM2-227ENST00000540709 SCRN1Q12765 414 aa5.93□□□□□ -1.46
MDM2-227ENST00000540709 GRB10Q13322 594 aa5.93□□□□□ -1.46
MDM2-227ENST00000540709 FAM178BQ8IXR5 827 aa5.93□□□□□ -1.46
MDM2-227ENST00000540709 CRACR2BQ8N4Y2 399 aaPredicted RBP5.93□□□□□ -1.46
MDM2-227ENST00000540709 ZCCHC4Q9H5U6 513 aa5.93□□□□□ -1.46
MDM2-227ENST00000540709 BCAS3Q9H6U6 928 aa5.93□□□□□ -1.46
MDM2-227ENST00000540709 R3HCC1Q9Y3T6 440 aaKnown RBP5.93□□□□□ -1.46
MDM2-227ENST00000540709 NPHS1O60500 1241 aa5.92□□□□□ -1.46
MDM2-227ENST00000540709 INHBBP09529 407 aa5.92□□□□□ -1.46
MDM2-227ENST00000540709 PLS3P13797 630 aa5.92□□□□□ -1.46
MDM2-227ENST00000540709 LIMS1P48059 325 aa5.92□□□□□ -1.46
MDM2-227ENST00000540709 CBX2Q14781 532 aaPredicted RBP5.92□□□□□ -1.46
MDM2-227ENST00000540709 TNNI3KQ59H18 835 aa5.92□□□□□ -1.46
MDM2-227ENST00000540709 GTF2IRD2BQ6EKJ0 949 aa5.92□□□□□ -1.46
MDM2-227ENST00000540709 GTF2IRD2Q86UP8 949 aa5.92□□□□□ -1.46
MDM2-227ENST00000540709 AMIGO3Q86WK7 504 aa5.92□□□□□ -1.46
MDM2-227ENST00000540709 IGDCC3Q8IVU1 814 aa5.92□□□□□ -1.46
MDM2-227ENST00000540709 TMEM151BQ8IW70 566 aa5.92□□□□□ -1.46
MDM2-227ENST00000540709 PWWP2AQ96N64 755 aa5.92□□□□□ -1.46
MDM2-227ENST00000540709 FAN1Q9Y2M0 1017 aa5.92□□□□□ -1.46
MDM2-227ENST00000540709 EMC9Q9Y3B6 208 aa5.92□□□□□ -1.46
MDM2-227ENST00000540709 FUCA1P04066 466 aa5.91□□□□□ -1.46
MDM2-227ENST00000540709 PFKLP17858 780 aa5.91□□□□□ -1.46
MDM2-227ENST00000540709 ECI1P42126 302 aa5.91□□□□□ -1.46
MDM2-227ENST00000540709 CORO7P57737 925 aa5.91□□□□□ -1.46
MDM2-227ENST00000540709 FXNQ16595 210 aa5.91□□□□□ -1.46
MDM2-227ENST00000540709 ZNF513Q8N8E2 541 aaPredicted RBP5.91□□□□□ -1.46
MDM2-227ENST00000540709 ZNF408Q9H9D4 720 aa5.91□□□□□ -1.46
MDM2-227ENST00000540709 ST7Q9NRC1 585 aa5.91□□□□□ -1.46
MDM2-227ENST00000540709 PRKAG3Q9UGI9 489 aa5.91□□□□□ -1.46
MDM2-227ENST00000540709 PLA2G2DQ9UNK4 145 aa5.91□□□□□ -1.46
MDM2-227ENST00000540709 PCDHA5Q9Y5H7 936 aa5.91□□□□□ -1.46
MDM2-227ENST00000540709 TRBV23OR9-2A0A075B6M9 112 aa5.9□□□□□ -1.46
MDM2-227ENST00000540709 C7orf72A4D263 438 aa5.9□□□□□ -1.46
MDM2-227ENST00000540709 PPP1R11O60927 126 aaPredicted RBP5.9□□□□□ -1.46
MDM2-227ENST00000540709 KCNJ6P48051 423 aa5.9□□□□□ -1.46
MDM2-227ENST00000540709 FAM129CQ86XR2 697 aa5.9□□□□□ -1.46
MDM2-227ENST00000540709 TMEFF1Q8IYR6 380 aa5.9□□□□□ -1.46
MDM2-227ENST00000540709 NLGN2Q8NFZ4 835 aa5.9□□□□□ -1.46
MDM2-227ENST00000540709 MICAL1Q8TDZ2 1067 aa5.9□□□□□ -1.46
MDM2-227ENST00000540709 BTN2A2Q8WVV5 523 aa5.9□□□□□ -1.46
MDM2-227ENST00000540709 ALG3Q92685 438 aa5.9□□□□□ -1.46
MDM2-227ENST00000540709 EPB41L4AQ9HCS5 686 aaPredicted RBP5.9□□□□□ -1.46
MDM2-227ENST00000540709 PODXL2Q9NZ53 605 aa5.9□□□□□ -1.46
MDM2-227ENST00000540709 MARCH2Q9P0N8 246 aa5.9□□□□□ -1.46
MDM2-227ENST00000540709 FBLN5Q9UBX5 448 aa5.9□□□□□ -1.46
MDM2-227ENST00000540709 SRGAP3O43295 1099 aa5.89□□□□□ -1.47
MDM2-227ENST00000540709 TBX1O43435 398 aa5.89□□□□□ -1.47
MDM2-227ENST00000540709 ITGAVP06756 1048 aa5.89□□□□□ -1.47
MDM2-227ENST00000540709 THBDP07204 575 aa5.89□□□□□ -1.47
MDM2-227ENST00000540709 SNRPB2P08579 225 aaKnown RBP5.89□□□□□ -1.47
MDM2-227ENST00000540709 ZNF143P52747 638 aaPredicted RBP5.89□□□□□ -1.47
MDM2-227ENST00000540709 TARBP2Q15633 366 aaKnown RBP5.89□□□□□ -1.47
MDM2-227ENST00000540709 TRIM59Q8IWR1 403 aa5.89□□□□□ -1.47
MDM2-227ENST00000540709 DACT3Q96B18 629 aaPredicted RBP5.89□□□□□ -1.47
MDM2-227ENST00000540709 CYP26B1Q9NR63 512 aa5.89□□□□□ -1.47
MDM2-227ENST00000540709 SIT1Q9Y3P8 196 aa5.89□□□□□ -1.47
MDM2-227ENST00000540709 IRS4O14654 1257 aaPredicted RBP5.88□□□□□ -1.47
MDM2-227ENST00000540709 SUSD5O60279 629 aa5.88□□□□□ -1.47
MDM2-227ENST00000540709 NTRK1P04629 796 aa5.88□□□□□ -1.47
MDM2-227ENST00000540709 GLI4P10075 376 aa5.88□□□□□ -1.47
MDM2-227ENST00000540709 MBLAC2Q68D91 279 aa5.88□□□□□ -1.47
MDM2-227ENST00000540709 LILRA6Q6PI73 481 aa5.88□□□□□ -1.47
MDM2-227ENST00000540709 TEX2Q8IWB9 1127 aa5.88□□□□□ -1.47
MDM2-227ENST00000540709 ZDHHC14Q8IZN3 488 aa5.88□□□□□ -1.47
MDM2-227ENST00000540709 NKX2-4Q9H2Z4 354 aa5.88□□□□□ -1.47
MDM2-227ENST00000540709 PARD6AQ9NPB6 346 aa5.88□□□□□ -1.47
MDM2-227ENST00000540709 NUDT5Q9UKK9 219 aa5.88□□□□□ -1.47
MDM2-227ENST00000540709 E9PSI1 815 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 SASH1O94885 1247 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 GJB6O95452 261 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 NCAM1P13591 858 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 ATF2P15336 505 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 MC3RP41968 323 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 INF2Q27J81 1249 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 WWC2Q6AWC2 1192 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 TTLL10Q6ZVT0 673 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 ZNF227Q86WZ6 799 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 MCF2L2Q86YR7 1114 aa5.87□□□□□ -1.47
MDM2-227ENST00000540709 NLGN1Q8N2Q7 840 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms