RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 LOC285556D6RIA3 1793 aa10.05□□□□□ -0.8
DDB1-213ENST00000539332 A0A1B0GVL5 298 aa10.05□□□□□ -0.8
DDB1-213ENST00000539332 SPDYE5A6NIY4 337 aa10.05□□□□□ -0.8
DDB1-213ENST00000539332 UNCXA6NJT0 531 aa10.05□□□□□ -0.8
DDB1-213ENST00000539332 C19orf81C9J6K1 198 aa10.05□□□□□ -0.8
DDB1-213ENST00000539332 WDR46O15213 610 aaKnown RBP10.05□□□□□ -0.8
DDB1-213ENST00000539332 PLA2G6O60733 806 aa10.05□□□□□ -0.8
DDB1-213ENST00000539332 CLSTN1O94985 981 aa10.05□□□□□ -0.8
DDB1-213ENST00000539332 CELF2O95319 508 aaKnown RBP10.05□□□□□ -0.8
DDB1-213ENST00000539332 VCAM1P19320 739 aa10.05□□□□□ -0.8
DDB1-213ENST00000539332 STAT2P52630 851 aa10.05□□□□□ -0.8
DDB1-213ENST00000539332 HMGCS2P54868 508 aa10.05□□□□□ -0.8
DDB1-213ENST00000539332 PPATQ06203 517 aa10.05□□□□□ -0.8
DDB1-213ENST00000539332 PIK3AP1Q6ZUJ8 805 aa10.05□□□□□ -0.8
DDB1-213ENST00000539332 KRT25Q7Z3Z0 450 aa10.05□□□□□ -0.8
DDB1-213ENST00000539332 HOMER1Q86YM7 354 aa10.05□□□□□ -0.8
DDB1-213ENST00000539332 RBM46Q8TBY0 533 aaKnown RBP10.05□□□□□ -0.8
DDB1-213ENST00000539332 FERMT2Q96AC1 680 aa10.05□□□□□ -0.8
DDB1-213ENST00000539332 COL11A1P12107 1806 aaPredicted RBP10.05□□□□□ -0.8
DDB1-213ENST00000539332 SMCO2A6NFE2 343 aa10.04□□□□□ -0.8
DDB1-213ENST00000539332 KIF3CO14782 793 aa10.04□□□□□ -0.8
DDB1-213ENST00000539332 IRF6O14896 467 aa10.04□□□□□ -0.8
DDB1-213ENST00000539332 KINO60870 393 aaKnown RBP10.04□□□□□ -0.8
DDB1-213ENST00000539332 CLK2P49760 499 aaKnown RBP10.04□□□□□ -0.8
DDB1-213ENST00000539332 IKQ13123 557 aaPredicted RBP10.04□□□□□ -0.8
DDB1-213ENST00000539332 ORC2Q13416 577 aaPredicted RBP10.04□□□□□ -0.8
DDB1-213ENST00000539332 SYDE2Q5VT97 1194 aa10.04□□□□□ -0.8
DDB1-213ENST00000539332 CST9Q5W186 159 aa10.04□□□□□ -0.8
DDB1-213ENST00000539332 ELOA2Q8IYF1 753 aaPredicted RBP10.04□□□□□ -0.8
DDB1-213ENST00000539332 PDCL2Q8N4E4 241 aa10.04□□□□□ -0.8
DDB1-213ENST00000539332 C4orf32Q8N8J7 132 aa10.04□□□□□ -0.8
DDB1-213ENST00000539332 C2orf69Q8N8R5 385 aa10.04□□□□□ -0.8
DDB1-213ENST00000539332 OTUD5Q96G74 571 aa10.04□□□□□ -0.8
DDB1-213ENST00000539332 C12orf42Q96LP6 360 aa10.04□□□□□ -0.8
DDB1-213ENST00000539332 CLIC6Q96NY7 704 aa10.04□□□□□ -0.8
DDB1-213ENST00000539332 RIC8AQ9NPQ8 531 aa10.04□□□□□ -0.8
DDB1-213ENST00000539332 USP25Q9UHP3 1055 aa10.04□□□□□ -0.8
DDB1-213ENST00000539332 CCDC194A0A1B0GVG4 234 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 ZNF202O95125 648 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 CCDC192P0DO97 292 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 GRIN1Q05586 938 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 PPIL2Q13356 520 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 QRICH1Q2TAL8 776 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 ARL6IP4Q66PJ3 421 aaKnown RBP10.03□□□□□ -0.8
DDB1-213ENST00000539332 TEX2Q8IWB9 1127 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 REXO1Q8N1G1 1221 aaKnown RBP10.03□□□□□ -0.8
DDB1-213ENST00000539332 RNF214Q8ND24 703 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 RASGRP4Q8TDF6 673 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 CHURC1Q8WUH1 139 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 OPTNQ96CV9 577 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 FBXO28Q9NVF7 368 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 PRR12Q9ULL5 1215 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 CXCL11O14625 94 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 SYKP43405 635 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 ADCY7P51828 1080 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 TYRO3Q06418 890 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 NONOQ15233 471 aaKnown RBP eCLIP10.03□□□□□ -0.8
DDB1-213ENST00000539332 CDC37Q16543 378 aaPredicted RBP10.03□□□□□ -0.8
DDB1-213ENST00000539332 CAMK4Q16566 473 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 SH3D19Q5HYK7 790 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 FAM160B2Q86V87 743 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 COA7Q96BR5 231 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 SLC10A4Q96EP9 437 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 TANGO6Q9C0B7 1094 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 GLT8D2Q9H1C3 349 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 RPAP3Q9H6T3 665 aaPredicted RBP10.03□□□□□ -0.8
DDB1-213ENST00000539332 TMOD4Q9NZQ9 345 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 FEM1BQ9UK73 627 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 KCNH4Q9UQ05 1017 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 MRVI1Q9Y6F6 885 aa10.03□□□□□ -0.8
DDB1-213ENST00000539332 PASKQ96RG2 1323 aa10.02□□□□□ -0.81
DDB1-213ENST00000539332 LAD1O00515 517 aa10.02□□□□□ -0.81
DDB1-213ENST00000539332 PRPHP41219 470 aa10.02□□□□□ -0.81
DDB1-213ENST00000539332 PTGDRQ13258 359 aa10.02□□□□□ -0.81
DDB1-213ENST00000539332 ZNF174Q15697 407 aa10.02□□□□□ -0.81
DDB1-213ENST00000539332 CKAP2LQ8IYA6 745 aa10.02□□□□□ -0.81
DDB1-213ENST00000539332 SMC1BQ8NDV3 1235 aa10.02□□□□□ -0.81
DDB1-213ENST00000539332 KIFC2Q96AC6 838 aa10.02□□□□□ -0.81
DDB1-213ENST00000539332 SLF1Q9BQI6 1058 aa10.02□□□□□ -0.81
DDB1-213ENST00000539332 A0A0G2JLL6 359 aaPredicted RBP10.01□□□□□ -0.81
DDB1-213ENST00000539332 EDIL3O43854 480 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 FLOT1O75955 427 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 ATP2B1P20020 1258 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 GJA5P36382 358 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 SNAP25P60880 206 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 INF2Q27J81 1249 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 PRRT2Q7Z6L0 340 aaPredicted RBP10.01□□□□□ -0.81
DDB1-213ENST00000539332 ZNF710Q8N1W2 664 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 PRPF38AQ8NAV1 312 aaKnown RBP10.01□□□□□ -0.81
DDB1-213ENST00000539332 CSRNP2Q9H175 543 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 KCNH3Q9ULD8 1083 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 A0A0G2JMZ2 1700 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 CTIFO43310 598 aaKnown RBP10.01□□□□□ -0.81
DDB1-213ENST00000539332 ADCY5O95622 1261 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 CAVIN2O95810 425 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 HUNKP57058 714 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 TREML2Q5T2D2 321 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 NEK8Q86SG6 692 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 HS6ST3Q8IZP7 471 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 PROCA1Q8NCQ7 364 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms