RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 MDM2Q00987 491 aaPredicted RBP9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 SPAG1Q07617 926 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 BICDL1Q6ZP65 573 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 RNF10Q8N5U6 811 aaKnown RBP9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 PRCCQ92733 491 aaPredicted RBP9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 LRRC45Q96CN5 670 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 FAM81BQ96LP2 452 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 CHP1Q99653 195 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 LRRC2Q9BYS8 371 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 NSRP1Q9H0G5 558 aaKnown RBP9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 UTP6Q9NYH9 597 aaKnown RBP9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 RNF14Q9UBS8 474 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 EMILIN1Q9Y6C2 1016 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 ADGRB3O60242 1522 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 ARHGAP5Q13017 1502 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 IGF2BP3O00425 579 aaKnown RBP eCLIP9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 HSPA9P38646 679 aaKnown RBP9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 PIP4K2AP48426 406 aaPredicted RBP9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 SARSP49591 514 aaKnown RBP9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 CBX3Q13185 183 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 CDKAL1Q5VV42 579 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 OR52E8Q6IFG1 317 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 PIGWQ7Z7B1 504 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 ARL10Q8N8L6 244 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 SLC35B4Q969S0 331 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 IFT43Q96FT9 208 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 GBP5Q96PP8 586 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 EPB41L5Q9HCM4 733 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 TMEM98Q9Y2Y6 226 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 HYOU1Q9Y4L1 999 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 PXDNLA1KZ92 1463 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 ABCC12Q96J65 1359 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 SYNRGQ9UMZ2 1314 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 MAP3K13O43283 966 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 GUCY2FP51841 1108 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 NCALDP61601 193 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 FKBP15Q5T1M5 1219 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 ERMARDQ5T6L9 678 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 KCNV2Q8TDN2 545 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 RAB3IPQ96QF0 476 aaPredicted RBP9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 XPO6Q96QU8 1125 aaKnown RBP9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 AGXT2Q9BYV1 514 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 KRT23Q9C075 422 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 ECT2Q9H8V3 914 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 NCOA5Q9HCD5 579 aaKnown RBP9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 ARHGEF10LQ9HCE6 1279 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 ARHGEF3Q9NR81 526 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 TUBGCP4Q9UGJ1 667 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 BARX2Q9UMQ3 279 aaPredicted RBP9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 IQSEC3Q9UPP2 1182 aaPredicted RBP9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 STK38LQ9Y2H1 464 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 CTNND1O60716 968 aaKnown RBP9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 HEXIM1O94992 359 aaKnown RBP9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 FAM153BP0C7A2 387 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 FDPSP14324 419 aaKnown RBP9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 CALB2P22676 271 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 HERVK_113P62684 666 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 MYBPC2Q14324 1141 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 FAM153CQ494X1 144 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 SEPT14Q6ZU15 432 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 EIF1ADQ8N9N8 165 aaKnown RBP9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 LINS1Q8NG48 757 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 PTPRN2Q92932 1015 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 ZNF653Q96CK0 615 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 FAM153AQ9UHL3 310 aa9.37□□□□□ -0.91
SRGAP1-202ENST00000537556 F8VZ95 297 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 BACH1O14867 736 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 CETN3O15182 167 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 GNAZP19086 355 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 PDIA3P30101 505 aaKnown RBP9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 PEX5P50542 639 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 COPS2P61201 443 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 KIF23Q02241 960 aaPredicted RBP9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 GUCY2DQ02846 1103 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 TTC39AQ5SRH9 613 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 RASIP1Q5U651 963 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 LONP2Q86WA8 852 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 RAB11FIP4Q86YS3 637 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 DNAJC9Q8WXX5 260 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 MED15Q96RN5 788 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 FAM129AQ9BZQ8 928 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 MIS12Q9H081 205 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 BRD8Q9H0E9 1235 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 PDP2Q9P2J9 529 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 TSPYL4Q9UJ04 414 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 LUC7L2Q9Y383 392 aaKnown RBP9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 DAAM1Q9Y4D1 1078 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 ITSN1Q15811 1721 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 CYP21A2P08686 494 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 KRT16P08779 473 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 RARAP10276 462 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 IDO1P14902 403 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 CTNNA1P35221 906 aaKnown RBP9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 RAD23BP54727 409 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 ZC3H6P61129 1189 aaKnown RBP9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 TMEM132AQ24JP5 1023 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 CFAP221Q4G0U5 840 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 MCM10Q7L590 875 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 MAEAQ7L5Y9 396 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms