RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 MGRN1O60291 552 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 USO1O60763 962 aaKnown RBP7.69□□□□□ -1.18
CPSF7-215ENST00000536145 MBD4O95243 580 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 APPP05067 770 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 MYL1P05976 194 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 PLEKP08567 350 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-215ENST00000536145 FGRP09769 529 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 ZBTB48P10074 688 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-215ENST00000536145 ECHS1P30084 290 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 SEC24CP53992 1094 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 GRIK3Q13003 919 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 TSR1Q2NL82 804 aaKnown RBP7.69□□□□□ -1.18
CPSF7-215ENST00000536145 ANKRD20A8PQ5CZ79 823 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 AGBL2Q5U5Z8 902 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 CYB5D1Q6P9G0 228 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 MFSD6Q6ZSS7 791 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 EP400NLQ6ZTU2 488 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 TMTC3Q6ZXV5 915 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 KRT26Q7Z3Y9 468 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 PARP9Q8IXQ6 854 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 IFT20Q8IY31 132 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 TEX11Q8IYF3 940 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 MAB21L3Q8N8X9 362 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 GIMAP7Q8NHV1 300 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 WHAMMQ8TF30 809 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.69□□□□□ -1.18
CPSF7-215ENST00000536145 LPIN2Q92539 896 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 BAP1Q92560 729 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 P3H4Q92791 437 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 P2RX5Q93086 422 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 SGSM3Q96HU1 749 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 TUBGCP2Q9BSJ2 902 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 EDEM3Q9BZQ6 932 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 NAPBQ9H115 298 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 ARMT1Q9H993 441 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 VEZTQ9HBM0 779 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 KBTBD4Q9NVX7 518 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 ZNHIT6Q9NWK9 470 aaKnown RBP7.69□□□□□ -1.18
CPSF7-215ENST00000536145 TSKSQ9UJT2 592 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 ODF2LQ9ULJ1 636 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 LEMD3Q9Y2U8 911 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 MYH6P13533 1939 aa7.69□□□□□ -1.18
CPSF7-215ENST00000536145 MYH2Q9UKX2 1941 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 SSU72P8A0A1W2PR75 194 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 MACROD2A1Z1Q3 448 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 GMNCA6NCL1 334 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 M0R2N6 131 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 KIF3CO14782 793 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 PPP1R12AO14974 1030 aaPredicted RBP7.68□□□□□ -1.18
CPSF7-215ENST00000536145 EPHB6O15197 1021 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 NKRFO15226 690 aaKnown RBP eCLIP7.68□□□□□ -1.18
CPSF7-215ENST00000536145 PPIP5K2O43314 1243 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 NCK2O43639 380 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 PRDM1O75626 825 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 PLEKHA8P1O95397 391 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 KRT14P02533 472 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 PDHBP11177 359 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 XBP1P17861 261 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 GNAT2P19087 354 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 ERCC3P19447 782 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 DRD4P21917 467 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 EIF4A3P38919 411 aaKnown RBP7.68□□□□□ -1.18
CPSF7-215ENST00000536145 PAFAH1B1P43034 410 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 KIF11P52732 1056 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 CABP4P57796 275 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 MRPS25P82663 173 aaKnown RBP7.68□□□□□ -1.18
CPSF7-215ENST00000536145 TBC1D8BQ0IIM8 1120 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 IFT88Q13099 833 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 IFIT5Q13325 482 aaKnown RBP7.68□□□□□ -1.18
CPSF7-215ENST00000536145 SNCBQ16143 134 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 UAP1Q16222 522 aaPredicted RBP7.68□□□□□ -1.18
CPSF7-215ENST00000536145 QPCTQ16769 361 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 METTL24Q5JXM2 366 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 CEP85LQ5SZL2 805 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 KCTD16Q68DU8 428 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 C8orf74Q6P047 294 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 PDXDC1Q6P996 788 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 ARHGAP27Q6ZUM4 889 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 PROSER2Q86WR7 435 aaPredicted RBP7.68□□□□□ -1.18
CPSF7-215ENST00000536145 LCORLQ8N3X6 602 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 RNF10Q8N5U6 811 aaKnown RBP7.68□□□□□ -1.18
CPSF7-215ENST00000536145 ARFGAP2Q8N6H7 521 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 ZBTB38Q8NAP3 1195 aaPredicted RBP7.68□□□□□ -1.18
CPSF7-215ENST00000536145 CCT6BQ92526 530 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 MTMR8Q96EF0 704 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 HINFPQ9BQA5 517 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 ZKSCAN3Q9BRR0 538 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 ZBTB3Q9H5J0 574 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 JADE2Q9NQC1 790 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 RBM28Q9NW13 759 aaKnown RBP7.68□□□□□ -1.18
CPSF7-215ENST00000536145 CNOT8Q9UFF9 292 aaKnown RBP7.68□□□□□ -1.18
CPSF7-215ENST00000536145 NFU1Q9UMS0 254 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 ABCB11O95342 1321 aa7.68□□□□□ -1.18
CPSF7-215ENST00000536145 F8W031 263 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-215ENST00000536145 H0YHG0 523 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 CES2O00748 559 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 PSMA7O14818 248 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 IDH1O75874 414 aaKnown RBP7.67□□□□□ -1.18
CPSF7-215ENST00000536145 DDAH1O94760 285 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 HEXIM1O94992 359 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms