RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 USP17L13C9JLJ4 530 aa12.45□□□□□ -0.42
TNC-209ENST00000534839 USP17L11C9JVI0 530 aa12.45□□□□□ -0.42
TNC-209ENST00000534839 USP17L18D6R9N7 530 aa12.45□□□□□ -0.42
TNC-209ENST00000534839 USP17L22D6RA61 530 aa12.45□□□□□ -0.42
TNC-209ENST00000534839 USP17L17D6RBQ6 530 aa12.45□□□□□ -0.42
TNC-209ENST00000534839 USP17L19D6RCP7 530 aa12.45□□□□□ -0.42
TNC-209ENST00000534839 USP17L20D6RJB6 530 aa12.45□□□□□ -0.42
TNC-209ENST00000534839 DGAT1O75907 488 aa12.45□□□□□ -0.42
TNC-209ENST00000534839 ASGR1P07306 291 aa12.45□□□□□ -0.42
TNC-209ENST00000534839 GRM5P41594 1212 aa12.45□□□□□ -0.42
TNC-209ENST00000534839 USP17L24Q0WX57 530 aa12.45□□□□□ -0.42
TNC-209ENST00000534839 CCDC184Q52MB2 194 aa12.45□□□□□ -0.42
TNC-209ENST00000534839 ZBTB33Q86T24 672 aa12.45□□□□□ -0.42
TNC-209ENST00000534839 POP1Q99575 1024 aaKnown RBP12.45□□□□□ -0.42
TNC-209ENST00000534839 MOV10L1Q9BXT6 1211 aaKnown RBP12.45□□□□□ -0.42
TNC-209ENST00000534839 MBIPQ9NS73 344 aa12.45□□□□□ -0.42
TNC-209ENST00000534839 GVINP1Q7Z2Y8 2422 aa12.45□□□□□ -0.42
TNC-209ENST00000534839 LDHBP07195 334 aaKnown RBP12.44□□□□□ -0.42
TNC-209ENST00000534839 SMAD2Q15796 467 aaKnown RBP12.44□□□□□ -0.42
TNC-209ENST00000534839 PKDCCQ504Y2 493 aa12.44□□□□□ -0.42
TNC-209ENST00000534839 USP17L2Q6R6M4 530 aa12.44□□□□□ -0.42
TNC-209ENST00000534839 LBX2Q6XYB7 198 aa12.44□□□□□ -0.42
TNC-209ENST00000534839 CATSPERGQ6ZRH7 1159 aa12.44□□□□□ -0.42
TNC-209ENST00000534839 EP400NLQ6ZTU2 488 aa12.44□□□□□ -0.42
TNC-209ENST00000534839 CCDC146Q8IYE0 955 aa12.44□□□□□ -0.42
TNC-209ENST00000534839 ASIC4Q96FT7 647 aa12.44□□□□□ -0.42
TNC-209ENST00000534839 AGBL1Q96MI9 1066 aa12.44□□□□□ -0.42
TNC-209ENST00000534839 MYH16Q9H6N6 1097 aa12.44□□□□□ -0.42
TNC-209ENST00000534839 SLC5A4Q9NY91 659 aa12.44□□□□□ -0.42
TNC-209ENST00000534839 DLL3Q9NYJ7 618 aa12.44□□□□□ -0.42
TNC-209ENST00000534839 ADAMTS8Q9UP79 889 aa12.44□□□□□ -0.42
TNC-209ENST00000534839 MROH5Q6ZUA9 1318 aa12.43□□□□□ -0.42
TNC-209ENST00000534839 ASNSP08243 561 aa12.43□□□□□ -0.42
TNC-209ENST00000534839 ABL2P42684 1182 aa12.43□□□□□ -0.42
TNC-209ENST00000534839 SIGLEC14Q08ET2 396 aa12.43□□□□□ -0.42
TNC-209ENST00000534839 DEFB128Q7Z7B8 93 aa12.43□□□□□ -0.42
TNC-209ENST00000534839 KIAA2013Q8IYS2 634 aa12.43□□□□□ -0.42
TNC-209ENST00000534839 PABPC5Q96DU9 382 aaKnown RBP12.43□□□□□ -0.42
TNC-209ENST00000534839 SH2B1Q9NRF2 756 aaPredicted RBP12.43□□□□□ -0.42
TNC-209ENST00000534839 SETXQ7Z333 2677 aaKnown RBP12.42□□□□□ -0.42
TNC-209ENST00000534839 PFKMP08237 780 aa12.42□□□□□ -0.42
TNC-209ENST00000534839 ERCC3P19447 782 aa12.42□□□□□ -0.42
TNC-209ENST00000534839 CST5P28325 142 aaPredicted RBP12.42□□□□□ -0.42
TNC-209ENST00000534839 FLIIQ13045 1269 aa12.42□□□□□ -0.42
TNC-209ENST00000534839 ZYXQ15942 572 aaKnown RBP12.42□□□□□ -0.42
TNC-209ENST00000534839 NBPF20Q3BBV1 942 aa12.42□□□□□ -0.42
TNC-209ENST00000534839 MCTP2Q6DN12 878 aa12.42□□□□□ -0.42
TNC-209ENST00000534839 MAP1BP46821 2468 aaKnown RBP12.42□□□□□ -0.42
TNC-209ENST00000534839 USP24Q9UPU5 2620 aa12.41□□□□□ -0.42
TNC-209ENST00000534839 STXBP3O00186 592 aa12.41□□□□□ -0.42
TNC-209ENST00000534839 MBTPS2O43462 519 aa12.41□□□□□ -0.42
TNC-209ENST00000534839 PDGFBP01127 241 aaPredicted RBP12.41□□□□□ -0.42
TNC-209ENST00000534839 ERVK-21P61565 698 aa12.41□□□□□ -0.42
TNC-209ENST00000534839 CCDC30Q5VVM6 783 aa12.41□□□□□ -0.42
TNC-209ENST00000534839 G2E3Q7L622 706 aa12.41□□□□□ -0.42
TNC-209ENST00000534839 SLC43A3Q8NBI5 491 aa12.41□□□□□ -0.42
TNC-209ENST00000534839 PCSK9Q8NBP7 692 aaKnown RBP12.41□□□□□ -0.42
TNC-209ENST00000534839 C12orf42Q96LP6 360 aa12.41□□□□□ -0.42
TNC-209ENST00000534839 TINF2Q9BSI4 451 aa12.41□□□□□ -0.42
TNC-209ENST00000534839 WASF2Q9Y6W5 498 aa12.41□□□□□ -0.42
TNC-209ENST00000534839 PDE8BO95263 885 aa12.4□□□□□ -0.42
TNC-209ENST00000534839 GDF11O95390 407 aa12.4□□□□□ -0.42
TNC-209ENST00000534839 ADH1CP00326 375 aa12.4□□□□□ -0.42
TNC-209ENST00000534839 NR3C2P08235 984 aa12.4□□□□□ -0.42
TNC-209ENST00000534839 C6orf222P0C671 652 aaPredicted RBP12.4□□□□□ -0.42
TNC-209ENST00000534839 ACTN1P12814 892 aa12.4□□□□□ -0.42
TNC-209ENST00000534839 LTBRP36941 435 aa12.4□□□□□ -0.42
TNC-209ENST00000534839 BTDP43251 543 aa12.4□□□□□ -0.42
TNC-209ENST00000534839 COL19A1Q14993 1142 aa12.4□□□□□ -0.42
TNC-209ENST00000534839 CLUL1Q15846 466 aa12.4□□□□□ -0.42
TNC-209ENST00000534839 LRRC24Q50LG9 513 aa12.4□□□□□ -0.42
TNC-209ENST00000534839 TMCO2Q7Z6W1 182 aaPredicted RBP12.4□□□□□ -0.42
TNC-209ENST00000534839 FAM9BQ8IZU0 186 aa12.4□□□□□ -0.42
TNC-209ENST00000534839 VGLL2Q8N8G2 317 aa12.4□□□□□ -0.42
TNC-209ENST00000534839 C8orf58Q8NAV2 365 aa12.4□□□□□ -0.42
TNC-209ENST00000534839 SHCBP1Q8NEM2 672 aa12.4□□□□□ -0.42
TNC-209ENST00000534839 TRPV6Q9H1D0 765 aa12.4□□□□□ -0.42
TNC-209ENST00000534839 ZNF292O60281 2723 aa12.39□□□□□ -0.43
TNC-209ENST00000534839 MYH13Q9UKX3 1938 aa12.39□□□□□ -0.43
TNC-209ENST00000534839 B4GALT4O60513 344 aa12.39□□□□□ -0.43
TNC-209ENST00000534839 AVPP01185 164 aa12.39□□□□□ -0.43
TNC-209ENST00000534839 RHBDL3P58872 404 aa12.39□□□□□ -0.43
TNC-209ENST00000534839 NR1H3Q13133 447 aa12.39□□□□□ -0.43
TNC-209ENST00000534839 TCEAL5Q5H9L2 206 aa12.39□□□□□ -0.43
TNC-209ENST00000534839 METTL24Q5JXM2 366 aa12.39□□□□□ -0.43
TNC-209ENST00000534839 VASH1Q7L8A9 365 aaPredicted RBP12.39□□□□□ -0.43
TNC-209ENST00000534839 ABRAQ8N0Z2 381 aa12.39□□□□□ -0.43
TNC-209ENST00000534839 CHAMP1Q96JM3 812 aa12.39□□□□□ -0.43
TNC-209ENST00000534839 TGS1Q96RS0 853 aaKnown RBP12.39□□□□□ -0.43
TNC-209ENST00000534839 SPATC1LQ9H0A9 340 aa12.39□□□□□ -0.43
TNC-209ENST00000534839 CLDND1Q9NY35 253 aa12.39□□□□□ -0.43
TNC-209ENST00000534839 HERC5Q9UII4 1024 aaKnown RBP12.39□□□□□ -0.43
TNC-209ENST00000534839 PTPRSQ13332 1948 aa12.39□□□□□ -0.43
TNC-209ENST00000534839 MYH2Q9UKX2 1941 aa12.39□□□□□ -0.43
TNC-209ENST00000534839 ST8SIA5O15466 376 aa12.38□□□□□ -0.43
TNC-209ENST00000534839 DUSP11O75319 330 aaKnown RBP12.38□□□□□ -0.43
TNC-209ENST00000534839 NNTQ13423 1086 aa12.38□□□□□ -0.43
TNC-209ENST00000534839 TRAF7Q6Q0C0 670 aa12.38□□□□□ -0.43
TNC-209ENST00000534839 LINS1Q8NG48 757 aa12.38□□□□□ -0.43
TNC-209ENST00000534839 RUNDC1Q96C34 613 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms