RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 USP17L22D6RA61 530 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 USP17L17D6RBQ6 530 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 USP17L19D6RCP7 530 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 USP17L20D6RJB6 530 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 USP17L24Q0WX57 530 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 PRR5LQ6MZQ0 368 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 USP17L6PQ6QN14 398 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 DGKHQ86XP1 1220 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 LARP4BQ92615 738 aaKnown RBP13.73□□□□□ -0.21
RAD50-209ENST00000533482 VTI1AQ96AJ9 217 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 HAUS4Q9H6D7 363 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 RFX7Q2KHR2 1363 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 PLCB3Q01970 1234 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 GABPB1Q06547 395 aaPredicted RBP13.73□□□□□ -0.21
RAD50-209ENST00000533482 ALX1Q15699 326 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 ZNF658Q5TYW1 1059 aaPredicted RBP13.73□□□□□ -0.21
RAD50-209ENST00000533482 ZNF772Q68DY9 489 aaPredicted RBP13.73□□□□□ -0.21
RAD50-209ENST00000533482 ARMCX5Q6P1M9 558 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 FNBP1Q96RU3 617 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 NT5C3AQ9H0P0 336 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 PI4KBQ9UBF8 816 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 CDC23Q9UJX2 597 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 GCOM1H8Y6P7 765 aaPredicted RBP13.72□□□□□ -0.21
RAD50-209ENST00000533482 POLR2MP0CAP2 368 aa13.72□□□□□ -0.21
RAD50-209ENST00000533482 MRPS25P82663 173 aaKnown RBP13.72□□□□□ -0.21
RAD50-209ENST00000533482 GRIN1Q05586 938 aa13.72□□□□□ -0.21
RAD50-209ENST00000533482 NKX1-1Q15270 411 aaPredicted RBP13.72□□□□□ -0.21
RAD50-209ENST00000533482 KMT5BQ4FZB7 885 aa13.72□□□□□ -0.21
RAD50-209ENST00000533482 CXCR5P32302 372 aa13.72□□□□□ -0.21
RAD50-209ENST00000533482 GBP2P32456 591 aaPredicted RBP13.72□□□□□ -0.21
RAD50-209ENST00000533482 EN1Q05925 392 aaPredicted RBP13.72□□□□□ -0.21
RAD50-209ENST00000533482 ADAM9Q13443 819 aa13.72□□□□□ -0.21
RAD50-209ENST00000533482 ASPRV1Q53RT3 343 aa13.72□□□□□ -0.21
RAD50-209ENST00000533482 INTS5Q6P9B9 1019 aaKnown RBP13.72□□□□□ -0.21
RAD50-209ENST00000533482 P2RX5Q93086 422 aa13.72□□□□□ -0.21
RAD50-209ENST00000533482 AP5Z1O43299 807 aa13.72□□□□□ -0.21
RAD50-209ENST00000533482 MYZAPP0CAP1 466 aa13.72□□□□□ -0.21
RAD50-209ENST00000533482 DESP17661 470 aa13.72□□□□□ -0.21
RAD50-209ENST00000533482 SEPT2Q15019 361 aa13.72□□□□□ -0.21
RAD50-209ENST00000533482 GALNT17Q6IS24 598 aa13.72□□□□□ -0.21
RAD50-209ENST00000533482 CCDC50Q8IVM0 306 aa13.72□□□□□ -0.21
RAD50-209ENST00000533482 MASTLQ96GX5 879 aa13.72□□□□□ -0.21
RAD50-209ENST00000533482 MPHOSPH6Q99547 160 aaKnown RBP13.72□□□□□ -0.21
RAD50-209ENST00000533482 PAIP2Q9BPZ3 127 aaKnown RBP13.72□□□□□ -0.21
RAD50-209ENST00000533482 ARMCX3Q9UH62 379 aaPredicted RBP13.72□□□□□ -0.21
RAD50-209ENST00000533482 HPS5Q9UPZ3 1129 aa13.72□□□□□ -0.21
RAD50-209ENST00000533482 CRKP46108 304 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 MIER3Q7Z3K6 550 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 IRX2Q9BZI1 471 aaPredicted RBP13.71□□□□□ -0.21
RAD50-209ENST00000533482 PXDNLA1KZ92 1463 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 WTIPA6NIX2 430 aaPredicted RBP13.71□□□□□ -0.21
RAD50-209ENST00000533482 EBAG9O00559 213 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 NOP56O00567 594 aaKnown RBP13.71□□□□□ -0.21
RAD50-209ENST00000533482 BMP3P12645 472 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 CLCN6P51797 869 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 GUCY2FP51841 1108 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 SMTNP53814 917 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 RASSF7Q02833 373 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 ADAT2Q7Z6V5 191 aaKnown RBP13.71□□□□□ -0.21
RAD50-209ENST00000533482 SELENOSQ9BQE4 189 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 TMEM260Q9NX78 707 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 ATP6V0A2Q9Y487 856 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 GOLGA6BA6NDN3 693 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 POTEMA6NI47 508 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 SPOPO43791 374 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 CALUO43852 315 aaPredicted RBP13.71□□□□□ -0.21
RAD50-209ENST00000533482 IVLP07476 585 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 XRCC5P13010 732 aaKnown RBP13.71□□□□□ -0.21
RAD50-209ENST00000533482 TNFAIP1Q13829 316 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 TUBB2AQ13885 445 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 MTF1Q14872 753 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 NLRX1Q86UT6 975 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 HOOK3Q86VS8 718 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 CCDC127Q96BQ5 260 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 TUBB2BQ9BVA1 445 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 PDE11AQ9HCR9 933 aa13.71□□□□□ -0.21
RAD50-209ENST00000533482 NEBLO76041 1014 aa13.71□□□□□ -0.22
RAD50-209ENST00000533482 RPS6KA1Q15418 735 aa13.71□□□□□ -0.22
RAD50-209ENST00000533482 GRIPAP1Q4V328 841 aa13.71□□□□□ -0.22
RAD50-209ENST00000533482 TXNRD3Q86VQ6 643 aa13.71□□□□□ -0.22
RAD50-209ENST00000533482 AFAP1L1Q8TED9 768 aa13.71□□□□□ -0.22
RAD50-209ENST00000533482 DDX41Q9UJV9 622 aaKnown RBP13.71□□□□□ -0.22
RAD50-209ENST00000533482 MYOM1P52179 1685 aa13.7□□□□□ -0.22
RAD50-209ENST00000533482 GOLGA6CA6NDK9 693 aa13.7□□□□□ -0.22
RAD50-209ENST00000533482 GOLGA6DP0CG33 693 aa13.7□□□□□ -0.22
RAD50-209ENST00000533482 IRX3P78415 501 aaPredicted RBP13.7□□□□□ -0.22
RAD50-209ENST00000533482 SRGAP1Q7Z6B7 1085 aa13.7□□□□□ -0.22
RAD50-209ENST00000533482 MICALL1Q8N3F8 863 aa13.7□□□□□ -0.22
RAD50-209ENST00000533482 SRBD1Q8N5C6 995 aaKnown RBP13.7□□□□□ -0.22
RAD50-209ENST00000533482 U2AF1L4Q8WU68 220 aaKnown RBP13.7□□□□□ -0.22
RAD50-209ENST00000533482 DISC1Q9NRI5 854 aa13.7□□□□□ -0.22
RAD50-209ENST00000533482 ZNF277Q9NRM2 450 aaPredicted RBP13.7□□□□□ -0.22
RAD50-209ENST00000533482 GOLGA6AQ9NYA3 693 aa13.7□□□□□ -0.22
RAD50-209ENST00000533482 SF3B3Q15393 1217 aaKnown RBP13.7□□□□□ -0.22
RAD50-209ENST00000533482 VWA3BQ502W6 1294 aa13.7□□□□□ -0.22
RAD50-209ENST00000533482 TTC16Q8NEE8 873 aa13.7□□□□□ -0.22
RAD50-209ENST00000533482 CTTNBP2NLQ9P2B4 639 aa13.7□□□□□ -0.22
RAD50-209ENST00000533482 WHAMMP3Q1A5X7 153 aa13.7□□□□□ -0.22
RAD50-209ENST00000533482 ARHGEF16Q5VV41 709 aa13.7□□□□□ -0.22
RAD50-209ENST00000533482 PEX26Q7Z412 305 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms