RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	BACE2	Q9Y5Z0	518 aa		4.99	□□□□□ -1.61
LMO7-223	ENST00000533299	C2orf71	A6NGG8	1288 aa		4.98	□□□□□ -1.61
LMO7-223	ENST00000533299	AURKA	O14965	403 aa		4.98	□□□□□ -1.61
LMO7-223	ENST00000533299	RAC2	P15153	192 aa		4.98	□□□□□ -1.61
LMO7-223	ENST00000533299	KCNJ6	P48051	423 aa		4.98	□□□□□ -1.61
LMO7-223	ENST00000533299	CHRNE	Q04844	493 aa		4.98	□□□□□ -1.61
LMO7-223	ENST00000533299	RCSD1	Q6JBY9	416 aa		4.98	□□□□□ -1.61
LMO7-223	ENST00000533299	SPATC1	Q76KD6	591 aa		4.98	□□□□□ -1.61
LMO7-223	ENST00000533299	THAP3	Q8WTV1	239 aa	Predicted RBP	4.98	□□□□□ -1.61
LMO7-223	ENST00000533299	KCTD13	Q8WZ19	329 aa		4.98	□□□□□ -1.61
LMO7-223	ENST00000533299	FCRL3	Q96P31	734 aa	Predicted RBP	4.98	□□□□□ -1.61
LMO7-223	ENST00000533299	IRF2BPL	Q9H1B7	796 aa		4.98	□□□□□ -1.61
LMO7-223	ENST00000533299	MYRF	Q9Y2G1	1151 aa		4.98	□□□□□ -1.61
LMO7-223	ENST00000533299	CCDC163	A0A0D9SF12	145 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	ETV2	O00321	342 aa	Predicted RBP	4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	APP	P05067	770 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	SNRPB2	P08579	225 aa	Known RBP	4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	SPATS1	Q496A3	300 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	HLA-DQA1	Q5Y7H0	255 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	ANKS4B	Q8N8V4	417 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	ZSWIM2	Q8NEG5	633 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	BTN2A2	Q8WVV5	523 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	AP5S1	Q9NUS5	200 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	TNFRSF10D	Q9UBN6	386 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	TMA7	Q9Y2S6	64 aa	Known RBP	4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	STXBP3	O00186	592 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	FGFR1	P11362	822 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	GDNF	P39905	211 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	KIR2DL1	P43626	348 aa	Predicted RBP	4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	KIR2DL2	P43627	348 aa	Predicted RBP	4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	IQCE	Q6IPM2	695 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	SCUBE1	Q8IWY4	988 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	MARCH10	Q8NA82	808 aa	Predicted RBP	4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	PDZD8	Q8NEN9	1154 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	DIRC2	Q96SL1	478 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	EPB41L4B	Q9H329	900 aa		4.97	□□□□□ -1.61
LMO7-223	ENST00000533299	FITM1	A5D6W6	292 aa		4.96	□□□□□ -1.62
LMO7-223	ENST00000533299	AKAP8	O43823	692 aa	Known RBP	4.96	□□□□□ -1.62
LMO7-223	ENST00000533299	PAM	P19021	973 aa		4.96	□□□□□ -1.62
LMO7-223	ENST00000533299	SCRN1	Q12765	414 aa		4.96	□□□□□ -1.62
LMO7-223	ENST00000533299	SLC14A2	Q15849	920 aa		4.96	□□□□□ -1.62
LMO7-223	ENST00000533299	C2orf27A	Q580R0	203 aa		4.96	□□□□□ -1.62
LMO7-223	ENST00000533299	NSMF	Q6X4W1	530 aa		4.96	□□□□□ -1.62
LMO7-223	ENST00000533299	JAML	Q86YT9	394 aa		4.96	□□□□□ -1.62
LMO7-223	ENST00000533299	MAP6	Q96JE9	813 aa		4.96	□□□□□ -1.62
LMO7-223	ENST00000533299	PIF1	Q9H611	641 aa		4.96	□□□□□ -1.62
LMO7-223	ENST00000533299	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.96	□□□□□ -1.62
LMO7-223	ENST00000533299	ZNF281	Q9Y2X9	895 aa		4.96	□□□□□ -1.62
LMO7-223	ENST00000533299	DNAJC25-GNG10	A0A024R161	153 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299		A0A1W2PQ27	194 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299		A0A1W2PQ64	194 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299		A0A1W2PQC6	194 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299		A0A1W2PQD8	194 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	TMEM82	A0PJX8	343 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	RBAK-RBAKDN	I3L0D1	243 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	FGF10	O15520	208 aa	Predicted RBP	4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	PRODH	O43272	600 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	DIAPH1	O60610	1272 aa	Known RBP	4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	SCG5	P05408	212 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	IFNGR1	P15260	489 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	ECI1	P42126	302 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	HK2	P52789	917 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	MAP4K2	Q12851	820 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	RTP2	Q5QGT7	225 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	E4F1	Q66K89	784 aa	Predicted RBP	4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	COPS5	Q92905	334 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	PTCHD1	Q96NR3	888 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	IER2	Q9BTL4	223 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	ADAMTS10	Q9H324	1103 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	NPHP3-ACAD11	A0A0J9YXS1	232 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299		A0A1W2PQ45	241 aa	Predicted RBP	4.95	□□□□□ -1.62
LMO7-223	ENST00000533299		A0A1W2PQY0	241 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	CLSTN1	O94985	981 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	ZGLP1	P0C6A0	271 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	PABPC1	P11940	636 aa	Known RBP	4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	GFRA1	P56159	465 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	RALGPS1	Q5JS13	557 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	LILRA2	Q8N149	483 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	JMY	Q8N9B5	988 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	SH3TC2	Q8TF17	1288 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	LINC01599	Q8WXQ3	324 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	PRDM7	Q9NQW5	492 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	ARHGEF4	Q9NR80	690 aa		4.95	□□□□□ -1.62
LMO7-223	ENST00000533299	TRBV23-1	A0A0A0MS06	115 aa		4.94	□□□□□ -1.62
LMO7-223	ENST00000533299	TLDC2	A0PJX2	215 aa		4.94	□□□□□ -1.62
LMO7-223	ENST00000533299	WTIP	A6NIX2	430 aa	Predicted RBP	4.94	□□□□□ -1.62
LMO7-223	ENST00000533299	MEFV	O15553	781 aa	Predicted RBP	4.94	□□□□□ -1.62
LMO7-223	ENST00000533299	TBX1	O43435	398 aa		4.94	□□□□□ -1.62
LMO7-223	ENST00000533299	SUMO1	P63165	101 aa	Known RBP	4.94	□□□□□ -1.62
LMO7-223	ENST00000533299	NR0B2	Q15466	257 aa		4.94	□□□□□ -1.62
LMO7-223	ENST00000533299	TAF7L	Q5H9L4	462 aa		4.94	□□□□□ -1.62
LMO7-223	ENST00000533299	GALNT18	Q6P9A2	607 aa		4.94	□□□□□ -1.62
LMO7-223	ENST00000533299	CEP128	Q6ZU80	1094 aa		4.94	□□□□□ -1.62
LMO7-223	ENST00000533299	HOMER1	Q86YM7	354 aa		4.94	□□□□□ -1.62
LMO7-223	ENST00000533299	SYNPO	Q8N3V7	929 aa		4.94	□□□□□ -1.62
LMO7-223	ENST00000533299	LILRB2	Q8N423	598 aa		4.94	□□□□□ -1.62
LMO7-223	ENST00000533299	MCMBP	Q9BTE3	642 aa		4.94	□□□□□ -1.62
LMO7-223	ENST00000533299	DHRS4	Q9BTZ2	278 aa		4.94	□□□□□ -1.62
LMO7-223	ENST00000533299	LGR4	Q9BXB1	951 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms