RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 UBLCP1Q8WVY7 318 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-232ENST00000532649 MED10Q9BTT4 135 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 ISCA1Q9BUE6 129 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 ANO3Q9BYT9 981 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 CPSF2Q9P2I0 782 aaKnown RBP9.59□□□□□ -0.87
CTNND1-232ENST00000532649 CLIC4Q9Y696 253 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 LRMPQ12912 555 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 SLC9C1Q4G0N8 1177 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 FOXP4Q8IVH2 680 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-232ENST00000532649 FAM178BQ8IXR5 827 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 CACNA2D3Q8IZS8 1091 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 COA7Q96BR5 231 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 FAM193BQ96PV7 902 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-232ENST00000532649 NRBP2Q9NSY0 501 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 NEXMIFQ5QGS0 1516 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 MYO3BQ8WXR4 1341 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 PALM3A6NDB9 673 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-232ENST00000532649 SH2D4BQ5SQS7 431 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-232ENST00000532649 ZNF577Q9BSK1 485 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 DIP2AQ14689 1571 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 RFC1P35251 1148 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-232ENST00000532649 ARHGAP44Q17R89 818 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 SYMPKQ92797 1274 aaKnown RBP9.59□□□□□ -0.87
CTNND1-232ENST00000532649 SLC10A4Q96EP9 437 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 TRIM56Q9BRZ2 755 aaKnown RBP9.59□□□□□ -0.87
CTNND1-232ENST00000532649 TDRD3Q9H7E2 651 aaKnown RBP9.59□□□□□ -0.87
CTNND1-232ENST00000532649 ADD3Q9UEY8 706 aaKnown RBP9.59□□□□□ -0.87
CTNND1-232ENST00000532649 ZC3H13Q5T200 1668 aaKnown RBP9.59□□□□□ -0.87
CTNND1-232ENST00000532649 DLC1Q96QB1 1528 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 PSDA5PKW4 1024 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-232ENST00000532649 LRRIQ4A6NIV6 560 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 NBPF26B4DH59 902 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 KRT3P12035 628 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 TMOD1P28289 359 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 IRX5P78411 483 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-232ENST00000532649 ATP11AP98196 1134 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 DMP1Q13316 513 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-232ENST00000532649 ARHGEF6Q15052 776 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 NBPF10Q6P3W6 841 aaKnown RBP9.58□□□□□ -0.88
CTNND1-232ENST00000532649 PODNQ7Z5L7 613 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 NBPF15Q8N660 670 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 CCDC26Q8TAB7 109 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 IFT81Q8WYA0 676 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 ADPGKQ9BRR6 497 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 ZNF341Q9BYN7 854 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 PLEKHG2Q9H7P9 1386 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 LONP1P36776 959 aaKnown RBP9.58□□□□□ -0.88
CTNND1-232ENST00000532649 FAM8A1Q9UBU6 413 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 ITM2BQ9Y287 266 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 GNA14O95837 355 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 CYP2E1P05181 493 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-232ENST00000532649 INPP1P49441 399 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 GPSM2P81274 684 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 PRKAG2Q9UGJ0 569 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 SEPT9Q9UHD8 586 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-232ENST00000532649 PCDHA7Q9UN72 937 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 RABGAP1Q9Y3P9 1069 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 KIDINS220Q9ULH0 1771 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 TLDC2A0PJX2 215 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 P4HA1P13674 534 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 CMA1P23946 247 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 NSUN7Q8NE18 718 aaKnown RBP9.58□□□□□ -0.88
CTNND1-232ENST00000532649 STRBPQ96SI9 672 aaKnown RBP9.58□□□□□ -0.88
CTNND1-232ENST00000532649 FOXP1Q9H334 677 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-232ENST00000532649 FAM207AQ9NSI2 230 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-232ENST00000532649 RNF181Q9P0P0 153 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 KIAA1468Q9P260 1216 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 LARSQ9P2J5 1176 aaKnown RBP9.58□□□□□ -0.88
CTNND1-232ENST00000532649 RSPH14Q9UHP6 348 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 TTLL3Q9Y4R7 772 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 PNPLA6Q8IY17 1366 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 PFDN6O15212 129 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 GH2P01242 217 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 XRCC5P13010 732 aaKnown RBP9.58□□□□□ -0.88
CTNND1-232ENST00000532649 KLHL30Q0D2K2 578 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 KIAA1024Q9UPX6 916 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 COL4A3BPQ9Y5P4 624 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.58□□□□□ -0.88
CTNND1-232ENST00000532649 MYO3AQ8NEV4 1616 aa9.58□□□□□ -0.88
CTNND1-232ENST00000532649 GOLGA8CPA6NN73 597 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 ZNF75DP51815 510 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 DCUN1D2Q6PH85 259 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 CCDC84Q86UT8 332 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-232ENST00000532649 TBCKQ8TEA7 893 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 ARFGAP3Q9NP61 516 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 USH1CQ9Y6N9 552 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 H0YCG3 227 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 GBP1P32455 592 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 PKP1Q13835 747 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 SLFNL1Q499Z3 407 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 TMEM179Q6ZVK1 233 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 CCDC170Q8IYT3 715 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 CHMP6Q96FZ7 201 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 BRIP1Q9BX63 1249 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 NBPF3Q9H094 633 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 NLRC4Q9NPP4 1024 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 CTTNBP2NLQ9P2B4 639 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 ADAMTS13Q76LX8 1427 aa9.57□□□□□ -0.88
CTNND1-232ENST00000532649 CYP2D6P10635 497 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms