RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 FAM167BQ9BTA0 163 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 OSBPL3Q9H4L5 887 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 FAM184BQ9ULE4 1060 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 U3KPZ7 1027 aaPredicted RBP7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 CDHR2Q9BYE9 1310 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 GDF11O95390 407 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 CYP2D6P10635 497 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 CASP7P55210 303 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 RABL6Q3YEC7 729 aaPredicted RBP7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 CCDC178Q5BJE1 867 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 ALS2CLQ60I27 953 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 CMTR1Q8N1G2 835 aaKnown RBP7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 LCORLQ8N3X6 602 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 SLC44A5Q8NCS7 719 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 WHAMMQ8TF30 809 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 SELENOOQ9BVL4 669 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 CCDC160A6NGH7 325 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 TSPY3P0CV98 308 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 TSPY8P0CW00 308 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 NR1D1P20393 614 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 IARSP41252 1262 aaKnown RBP7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 ICA1Q05084 483 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 PLCB4Q15147 1175 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 LONRF3Q496Y0 759 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 ADALQ6DHV7 355 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 SPICE1Q8N0Z3 855 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 USP28Q96RU2 1077 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 PTPDC1A2A3K4 754 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 MAP2K7O14733 419 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 ACBD5Q5T8D3 534 aaPredicted RBP7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 CYB5D1Q6P9G0 228 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 Q6ZUG5 572 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 SULF1Q8IWU6 871 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 MICALL2Q8IY33 904 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 RASEFQ8IZ41 740 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 GBP7Q8N8V2 638 aaPredicted RBP7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 CCDC197Q8NCU1 140 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 NSMCE1Q8WV22 266 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 RIN2Q8WYP3 895 aaPredicted RBP7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 CCDC51Q96ER9 411 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 MCM8Q9UJA3 840 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 JAK2O60674 1132 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 PECAM1P16284 738 aaPredicted RBP7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 EPHB4P54760 987 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 GSTO1P78417 241 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 KCNB1Q14721 858 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 GRIK5Q16478 980 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 MUM1Q2TAK8 710 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 TMEM67Q5HYA8 995 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 LRRC45Q96CN5 670 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 CNOT7Q9UIV1 285 aaKnown RBP7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 AOX1Q06278 1338 aa7.49□□□□□ -1.21
TGFBR3-209ENST00000532540 ALS2Q96Q42 1657 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 M0R2C6 588 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 AKR1B10O60218 316 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 PFKFB2O60825 505 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 FERP16591 822 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 GMPSP49915 693 aaPredicted RBP7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 SF3A3Q12874 501 aaKnown RBP eCLIP7.48□□□□□ -1.214e-7■■■■■ 31.4
TGFBR3-209ENST00000532540 PLS1Q14651 629 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 RSRC2Q7L4I2 434 aaKnown RBP7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 CCDC13Q8IYE1 715 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 LMBR1Q8WVP7 490 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 APPBP2Q92624 585 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 P3H4Q92791 437 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 CRAMP1Q96RY5 1269 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 PAPOLBQ9NRJ5 636 aaKnown RBP7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 HAUS2Q9NVX0 235 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 TRPM3Q9HCF6 1732 aaPredicted RBP7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 IRF6O14896 467 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 CIAO1O76071 339 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 ATP1A3P13637 1013 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 RPS6KB1P23443 525 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 KRT9P35527 623 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 PAPOLAP51003 745 aaKnown RBP7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 CCNHP51946 323 aaPredicted RBP7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 CXCL9Q07325 125 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 SEPT6Q14141 434 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 CCDC92Q53HC0 331 aaPredicted RBP7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 NCAPH2Q6IBW4 605 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 TBC1D1Q86TI0 1168 aaPredicted RBP7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 NLRP14Q86W24 1093 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 DHX40Q8IX18 779 aaKnown RBP7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 MLKLQ8NB16 471 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 IL17RAQ96F46 866 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 PGBD1Q96JS3 809 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 HAUS7Q99871 368 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 HINFPQ9BQA5 517 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 IQCGQ9H095 443 aaKnown RBP7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 ZSWIM6Q9HCJ5 1215 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 STIM2Q9P246 746 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 SCOCQ9UIL1 159 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 CEP131Q9UPN4 1083 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 MACROD2A1Z1Q3 448 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 LARGE1O95461 756 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 STX17P56962 302 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 TOGARAM2Q6ZUX3 1019 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 BRAPQ7Z569 592 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 CLEC10AQ8IUN9 316 aa7.48□□□□□ -1.21
TGFBR3-209ENST00000532540 CCDC155Q8N6L0 562 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms