RNA–Protein interactions for RNA: ENST00000526825.5

LTBP3-206, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,002 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-206ENST00000526825 PBX4Q9BYU1 374 aa17.71■□□□□ 0.43
LTBP3-206ENST00000526825 GPCPD1Q9NPB8 672 aa17.71■□□□□ 0.43
LTBP3-206ENST00000526825 IL23AQ9NPF7 189 aa17.71■□□□□ 0.43
LTBP3-206ENST00000526825 TOMM22Q9NS69 142 aa17.71■□□□□ 0.43
LTBP3-206ENST00000526825 TTC28Q96AY4 2481 aa17.71■□□□□ 0.42
LTBP3-206ENST00000526825 ZMYM6O95789 1325 aa17.71■□□□□ 0.42
LTBP3-206ENST00000526825 SPTBN5Q9NRC6 3674 aaKnown RBP17.7■□□□□ 0.42
LTBP3-206ENST00000526825 LOC102724159A0A0B4J2E5 919 aa17.7■□□□□ 0.42
LTBP3-206ENST00000526825 RBM47A0AV96 593 aaKnown RBP17.7■□□□□ 0.42
LTBP3-206ENST00000526825 NFIBO00712 420 aa17.7■□□□□ 0.42
LTBP3-206ENST00000526825 ZEB2O60315 1214 aa17.7■□□□□ 0.42
LTBP3-206ENST00000526825 CENPBP07199 599 aaPredicted RBP17.7■□□□□ 0.42
LTBP3-206ENST00000526825 PDHBP11177 359 aa17.7■□□□□ 0.42
LTBP3-206ENST00000526825 PBX2P40425 430 aa17.7■□□□□ 0.42
LTBP3-206ENST00000526825 PWP2Q15269 919 aaKnown RBP17.7■□□□□ 0.42
LTBP3-206ENST00000526825 PSRC1Q6PGN9 363 aaPredicted RBP17.7■□□□□ 0.42
LTBP3-206ENST00000526825 HERVK_113Q902F9 699 aa17.7■□□□□ 0.42
LTBP3-206ENST00000526825 TRPV6Q9H1D0 765 aa17.7■□□□□ 0.42
LTBP3-206ENST00000526825 ADD3Q9UEY8 706 aaKnown RBP17.7■□□□□ 0.42
LTBP3-206ENST00000526825 UMODL1Q5DID0 1318 aa17.7■□□□□ 0.42
LTBP3-206ENST00000526825 FRMPD2Q68DX3 1309 aaPredicted RBP17.7■□□□□ 0.42
LTBP3-206ENST00000526825 LCTP09848 1927 aa17.69■□□□□ 0.42
LTBP3-206ENST00000526825 SNHG28P0DPA3 235 aa17.69■□□□□ 0.42
LTBP3-206ENST00000526825 ALDH5A1P51649 535 aaPredicted RBP17.69■□□□□ 0.42
LTBP3-206ENST00000526825 HAND2P61296 217 aa17.69■□□□□ 0.42
LTBP3-206ENST00000526825 PSMC6P62333 389 aa17.69■□□□□ 0.42
LTBP3-206ENST00000526825 AKNAD1Q5T1N1 836 aa17.69■□□□□ 0.42
LTBP3-206ENST00000526825 HIPK3Q9H422 1215 aa17.69■□□□□ 0.42
LTBP3-206ENST00000526825 CXXC1Q9P0U4 656 aaPredicted RBP17.69■□□□□ 0.42
LTBP3-206ENST00000526825 B4GALT4O60513 344 aa17.68■□□□□ 0.42
LTBP3-206ENST00000526825 FGBP02675 491 aa17.68■□□□□ 0.42
LTBP3-206ENST00000526825 PCP11498 1178 aaKnown RBP17.68■□□□□ 0.42
LTBP3-206ENST00000526825 SDSP20132 328 aa17.68■□□□□ 0.42
LTBP3-206ENST00000526825 ZNF543Q08ER8 600 aa17.68■□□□□ 0.42
LTBP3-206ENST00000526825 MFSD6Q6ZSS7 791 aa17.68■□□□□ 0.42
LTBP3-206ENST00000526825 VWCEQ96DN2 955 aa17.68■□□□□ 0.42
LTBP3-206ENST00000526825 NOC4LQ9BVI4 516 aaKnown RBP17.68■□□□□ 0.42
LTBP3-206ENST00000526825 WDR11Q9BZH6 1224 aa17.68■□□□□ 0.42
LTBP3-206ENST00000526825 OSBPL3Q9H4L5 887 aa17.68■□□□□ 0.42
LTBP3-206ENST00000526825 CCDC171Q6TFL3 1326 aa17.68■□□□□ 0.42
LTBP3-206ENST00000526825 PTPDC1A2A3K4 754 aa17.67■□□□□ 0.42
LTBP3-206ENST00000526825 CCL23P55773 120 aa17.67■□□□□ 0.42
LTBP3-206ENST00000526825 WNT8AQ9H1J5 351 aa17.67■□□□□ 0.42
LTBP3-206ENST00000526825 PNMA2Q9UL42 364 aa17.67■□□□□ 0.42
LTBP3-206ENST00000526825 EDNRBP24530 442 aa17.66■□□□□ 0.42
LTBP3-206ENST00000526825 CALML3P27482 149 aa17.66■□□□□ 0.42
LTBP3-206ENST00000526825 RPS6P62753 249 aaKnown RBP17.66■□□□□ 0.42
LTBP3-206ENST00000526825 PURAQ00577 322 aaKnown RBP17.66■□□□□ 0.42
LTBP3-206ENST00000526825 SLC30A10Q6XR72 485 aa17.66■□□□□ 0.42
LTBP3-206ENST00000526825 RNF207Q6ZRF8 634 aa17.66■□□□□ 0.42
LTBP3-206ENST00000526825 TBC1D10CQ8IV04 446 aa17.66■□□□□ 0.42
LTBP3-206ENST00000526825 USP38Q8NB14 1042 aa17.66■□□□□ 0.42
LTBP3-206ENST00000526825 IL25Q9H293 177 aa17.66■□□□□ 0.42
LTBP3-206ENST00000526825 ALDH8A1Q9H2A2 487 aaPredicted RBP17.66■□□□□ 0.42
LTBP3-206ENST00000526825 LRRC37A2A6NM11 1700 aa17.66■□□□□ 0.42
LTBP3-206ENST00000526825 WDR19Q8NEZ3 1342 aa17.66■□□□□ 0.42
LTBP3-206ENST00000526825 CHD9Q3L8U1 2897 aa17.65■□□□□ 0.42
LTBP3-206ENST00000526825 GSPT1P15170 499 aaKnown RBP17.65■□□□□ 0.42
LTBP3-206ENST00000526825 DGKHQ86XP1 1220 aa17.65■□□□□ 0.42
LTBP3-206ENST00000526825 RGS22Q8NE09 1264 aa17.65■□□□□ 0.42
LTBP3-206ENST00000526825 POLR3EQ9NVU0 708 aa17.65■□□□□ 0.42
LTBP3-206ENST00000526825 CWC27Q6UX04 472 aaKnown RBP17.64■□□□□ 0.41
LTBP3-206ENST00000526825 OTOP2Q7RTS6 562 aa17.64■□□□□ 0.41
LTBP3-206ENST00000526825 RPUSD2Q8IZ73 545 aaKnown RBP17.64■□□□□ 0.41
LTBP3-206ENST00000526825 DNERQ8NFT8 737 aa17.64■□□□□ 0.41
LTBP3-206ENST00000526825 ANKS1AQ92625 1134 aa17.64■□□□□ 0.41
LTBP3-206ENST00000526825 ESR2Q92731 530 aa17.64■□□□□ 0.41
LTBP3-206ENST00000526825 UBA5Q9GZZ9 404 aa17.64■□□□□ 0.41
LTBP3-206ENST00000526825 RNF41Q9H4P4 317 aaPredicted RBP17.64■□□□□ 0.41
LTBP3-206ENST00000526825 PRDM12Q9H4Q4 367 aa17.64■□□□□ 0.41
LTBP3-206ENST00000526825 TRMT13Q9NUP7 481 aaKnown RBP17.64■□□□□ 0.41
LTBP3-206ENST00000526825 MSRAQ9UJ68 235 aa17.64■□□□□ 0.41
LTBP3-206ENST00000526825 ZNF213O14771 459 aa17.63■□□□□ 0.41
LTBP3-206ENST00000526825 NKRFO15226 690 aaKnown RBP eCLIP17.63■□□□□ 0.41
LTBP3-206ENST00000526825 SUPT20HL2P0C7V6 817 aa17.63■□□□□ 0.41
LTBP3-206ENST00000526825 GOLGA8HP0CJ92 632 aa17.63■□□□□ 0.41
LTBP3-206ENST00000526825 CPT1AP50416 773 aa17.63■□□□□ 0.41
LTBP3-206ENST00000526825 RAB30Q15771 203 aa17.63■□□□□ 0.41
LTBP3-206ENST00000526825 GPATCH4Q5T3I0 446 aaKnown RBP17.63■□□□□ 0.41
LTBP3-206ENST00000526825 TBC1D5Q92609 795 aa17.63■□□□□ 0.41
LTBP3-206ENST00000526825 SCLYQ96I15 445 aa17.63■□□□□ 0.41
LTBP3-206ENST00000526825 ZKSCAN3Q9BRR0 538 aa17.63■□□□□ 0.41
LTBP3-206ENST00000526825 MTG1Q9BT17 334 aaPredicted RBP17.63■□□□□ 0.41
LTBP3-206ENST00000526825 MTIF3Q9H2K0 278 aaKnown RBP17.63■□□□□ 0.41
LTBP3-206ENST00000526825 CPVLQ9H3G5 476 aa17.63■□□□□ 0.41
LTBP3-206ENST00000526825 YBX2Q9Y2T7 364 aaKnown RBP17.63■□□□□ 0.41
LTBP3-206ENST00000526825 A6NJR5 290 aa17.62■□□□□ 0.41
LTBP3-206ENST00000526825 MYL3P08590 195 aa17.62■□□□□ 0.41
LTBP3-206ENST00000526825 CYP2C9P11712 490 aa17.62■□□□□ 0.41
LTBP3-206ENST00000526825 NT5C2P49902 561 aa17.62■□□□□ 0.41
LTBP3-206ENST00000526825 MFAP1P55081 439 aaKnown RBP17.62■□□□□ 0.41
LTBP3-206ENST00000526825 PDE4DQ08499 809 aa17.62■□□□□ 0.41
LTBP3-206ENST00000526825 ADGRE1Q14246 886 aa17.62■□□□□ 0.41
LTBP3-206ENST00000526825 NBPF20Q3BBV1 942 aa17.62■□□□□ 0.41
LTBP3-206ENST00000526825 SKAP1Q86WV1 359 aa17.62■□□□□ 0.41
LTBP3-206ENST00000526825 OR6J1Q8NGC5 347 aa17.62■□□□□ 0.41
LTBP3-206ENST00000526825 COPS5Q92905 334 aa17.62■□□□□ 0.41
LTBP3-206ENST00000526825 GAS2L1Q99501 681 aaPredicted RBP17.62■□□□□ 0.41
LTBP3-206ENST00000526825 MAF1Q9H063 256 aa17.62■□□□□ 0.41
LTBP3-206ENST00000526825 NKX2-4Q9H2Z4 354 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms