RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 ESYT2A0FGR8 921 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 TM4SF1P30408 202 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 RFC4P35249 363 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 MAP9Q49MG5 647 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 WDR59Q6PJI9 974 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 ZNF804AQ7Z570 1209 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 SH3RF3Q8TEJ3 882 aaPredicted RBP9.29□□□□□ -0.92
CHD7-202ENST00000524602 DUSP9Q99956 384 aaKnown RBP9.29□□□□□ -0.92
CHD7-202ENST00000524602 TMEM47Q9BQJ4 181 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 GUCA1BQ9UMX6 200 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 UBR3Q6ZT12 1888 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 PLCG1P19174 1290 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 TRIM21P19474 475 aaKnown RBP9.28□□□□□ -0.92
CHD7-202ENST00000524602 HERVK_113P62684 666 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 CCDC122Q5T0U0 273 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 FOXR2Q6PJQ5 311 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 NEK8Q86SG6 692 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 ABCB6Q9NP58 842 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 MED4Q9NPJ6 270 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 SAR1BQ9Y6B6 198 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 KLRF2D3W0D1 207 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 ABL1P00519 1130 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 PLCG2P16885 1265 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 RASA1P20936 1047 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 NAPAP54920 295 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 SLC35G1Q2M3R5 365 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 TRAPPC3LQ5T215 181 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 IQCEQ6IPM2 695 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 C16orf86Q6ZW13 317 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 KIAA1328Q86T90 577 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 RRP36Q96EU6 259 aaKnown RBP9.28□□□□□ -0.92
CHD7-202ENST00000524602 DYNLL2Q96FJ2 89 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 STK17AQ9UEE5 414 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 ADAM21Q9UKJ8 722 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 USP17L3A6NCW0 530 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 USP17L4A6NCW7 530 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 PP2D1A8MPX8 630 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 B4DLN1 442 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 PES1O00541 588 aaKnown RBP9.28□□□□□ -0.92
CHD7-202ENST00000524602 FGFR1OPO95684 399 aaKnown RBP9.28□□□□□ -0.92
CHD7-202ENST00000524602 VSNL1P62760 191 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 PDE4DQ08499 809 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 TBC1D8BQ0IIM8 1120 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 FKBP15Q5T1M5 1219 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 USP17L1Q7RTZ2 530 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 TXNRD3Q86VQ6 643 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 NEDD1Q8NHV4 660 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 FAM71BQ8TC56 605 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 RUBCNQ92622 972 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 JAKMIP2Q96AA8 810 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 CALML4Q96GE6 196 aa9.28□□□□□ -0.92
CHD7-202ENST00000524602 CNOT6LQ96LI5 555 aaKnown RBP9.28□□□□□ -0.92
CHD7-202ENST00000524602 PURBQ96QR8 312 aaKnown RBP9.28□□□□□ -0.92
CHD7-202ENST00000524602 QTRT2Q9H974 415 aaKnown RBP9.28□□□□□ -0.92
CHD7-202ENST00000524602 SEC63Q9UGP8 760 aaKnown RBP9.28□□□□□ -0.92
CHD7-202ENST00000524602 H3BQF6 201 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 CCNT1O60563 726 aaKnown RBP9.27□□□□□ -0.93
CHD7-202ENST00000524602 RHOXF2BP0C7M4 288 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 HNRNPH3P31942 346 aaKnown RBP9.27□□□□□ -0.93
CHD7-202ENST00000524602 USP14P54578 494 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 GRAPQ13588 217 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 CASP8Q14790 479 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 TXNRD1Q16881 649 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 SOGA3Q5TF21 947 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 GRAPLQ8TC17 118 aaPredicted RBP9.27□□□□□ -0.93
CHD7-202ENST00000524602 RHOXF2Q9BQY4 288 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 CWC15Q9P013 229 aaKnown RBP9.27□□□□□ -0.93
CHD7-202ENST00000524602 SNED1Q8TER0 1413 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 FOCADQ5VW36 1801 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 PVALEFA0A1B0GWK0 134 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 NOVP48745 357 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 ASIC1P78348 528 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 ST5P78524 1137 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 HSP90B2PQ58FF3 399 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 ARHGAP27Q6ZUM4 889 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 LRRC27Q9C0I9 530 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 NHEJ1Q9H9Q4 299 aaPredicted RBP9.27□□□□□ -0.93
CHD7-202ENST00000524602 PDE11AQ9HCR9 933 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 ZCCHC17Q9NP64 241 aaKnown RBP9.27□□□□□ -0.93
CHD7-202ENST00000524602 ANKIB1Q9P2G1 1089 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 STX8Q9UNK0 236 aa9.27□□□□□ -0.93
CHD7-202ENST00000524602 SMCO2A6NFE2 343 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 MTIF2P46199 727 aaKnown RBP9.26□□□□□ -0.93
CHD7-202ENST00000524602 HNRNPH2P55795 449 aaKnown RBP9.26□□□□□ -0.93
CHD7-202ENST00000524602 MCM6Q14566 821 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 NFIXQ14938 502 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 ANKRD40Q6AI12 368 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 SLF2Q8IX21 1173 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 GOLGA5Q8TBA6 731 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 TGFBRAP1Q8WUH2 860 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 NOC4LQ9BVI4 516 aaKnown RBP9.26□□□□□ -0.93
CHD7-202ENST00000524602 RTFDC1Q9BY42 306 aaPredicted RBP9.26□□□□□ -0.93
CHD7-202ENST00000524602 PLIN4Q96Q06 1357 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.26□□□□□ -0.93
CHD7-202ENST00000524602 FXR2P51116 673 aaKnown RBP eCLIP9.26□□□□□ -0.932e-6■■■■□ 23.1
CHD7-202ENST00000524602 VAV2P52735 878 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 LETM2Q2VYF4 491 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 MIIPQ5JXC2 388 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 NCAPH2Q6IBW4 605 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 CENPPQ6IPU0 288 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms