RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 C4orf32Q8N8J7 132 aa13.22□□□□□ -0.29
PTPRK-216ENST00000524481 NLGN2Q8NFZ4 835 aa13.22□□□□□ -0.29
PTPRK-216ENST00000524481 MYOZ2Q9NPC6 264 aa13.22□□□□□ -0.29
PTPRK-216ENST00000524481 KIAA1755Q5JYT7 1200 aa13.21□□□□□ -0.29
PTPRK-216ENST00000524481 MED15Q96RN5 788 aa13.21□□□□□ -0.29
PTPRK-216ENST00000524481 SRRTQ9BXP5 876 aaKnown RBP13.21□□□□□ -0.29
PTPRK-216ENST00000524481 CNOT7Q9UIV1 285 aaKnown RBP13.21□□□□□ -0.29
PTPRK-216ENST00000524481 KIAA1024Q9UPX6 916 aa13.21□□□□□ -0.29
PTPRK-216ENST00000524481 NID2Q14112 1375 aa13.21□□□□□ -0.29
PTPRK-216ENST00000524481 COL24A1Q17RW2 1714 aa13.21□□□□□ -0.29
PTPRK-216ENST00000524481 A0A1B0GUL6 1792 aa13.21□□□□□ -0.29
PTPRK-216ENST00000524481 CBFA2T2O43439 604 aa13.21□□□□□ -0.3
PTPRK-216ENST00000524481 GMPSP49915 693 aaPredicted RBP13.21□□□□□ -0.3
PTPRK-216ENST00000524481 STAT2P52630 851 aa13.21□□□□□ -0.3
PTPRK-216ENST00000524481 FILIP1LQ4L180 1135 aa13.21□□□□□ -0.3
PTPRK-216ENST00000524481 GALNT17Q6IS24 598 aa13.21□□□□□ -0.3
PTPRK-216ENST00000524481 ARMCX5Q6P1M9 558 aa13.21□□□□□ -0.3
PTPRK-216ENST00000524481 NELFCDQ8IXH7 590 aa13.21□□□□□ -0.3
PTPRK-216ENST00000524481 CCDC47Q96A33 483 aaKnown RBP13.21□□□□□ -0.3
PTPRK-216ENST00000524481 SH2D3AQ9BRG2 576 aa13.21□□□□□ -0.3
PTPRK-216ENST00000524481 PRR12Q9ULL5 1215 aa13.21□□□□□ -0.3
PTPRK-216ENST00000524481 E9PMD0 336 aa13.2□□□□□ -0.3
PTPRK-216ENST00000524481 SP4Q02446 784 aa13.2□□□□□ -0.3
PTPRK-216ENST00000524481 ARL6IP4Q66PJ3 421 aaKnown RBP13.2□□□□□ -0.3
PTPRK-216ENST00000524481 PPFIBP1Q86W92 1011 aa13.2□□□□□ -0.3
PTPRK-216ENST00000524481 GSDMAQ96QA5 445 aa13.2□□□□□ -0.3
PTPRK-216ENST00000524481 DESI2Q9BSY9 194 aa13.2□□□□□ -0.3
PTPRK-216ENST00000524481 GTPBP6O43824 516 aaPredicted RBP13.2□□□□□ -0.3
PTPRK-216ENST00000524481 PAK1Q13153 545 aa13.2□□□□□ -0.3
PTPRK-216ENST00000524481 PTPN14Q15678 1187 aa13.2□□□□□ -0.3
PTPRK-216ENST00000524481 SV2BQ7L1I2 683 aa13.2□□□□□ -0.3
PTPRK-216ENST00000524481 ZKSCAN4Q969J2 545 aaPredicted RBP13.2□□□□□ -0.3
PTPRK-216ENST00000524481 ZBTB9Q96C00 473 aa13.2□□□□□ -0.3
PTPRK-216ENST00000524481 ANO3Q9BYT9 981 aa13.2□□□□□ -0.3
PTPRK-216ENST00000524481 NPHP3-ACAD11A0A0J9YXS1 232 aa13.2□□□□□ -0.3
PTPRK-216ENST00000524481 VIL1P09327 827 aaKnown RBP13.2□□□□□ -0.3
PTPRK-216ENST00000524481 ALAS1P13196 640 aa13.2□□□□□ -0.3
PTPRK-216ENST00000524481 PLS1Q14651 629 aa13.2□□□□□ -0.3
PTPRK-216ENST00000524481 ENOX2Q16206 610 aaKnown RBP13.2□□□□□ -0.3
PTPRK-216ENST00000524481 NAALADL2Q58DX5 795 aa13.2□□□□□ -0.3
PTPRK-216ENST00000524481 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.2□□□□□ -0.3
PTPRK-216ENST00000524481 RAB34Q9BZG1 259 aa13.2□□□□□ -0.3
PTPRK-216ENST00000524481 HSD3B7Q9H2F3 369 aa13.2□□□□□ -0.3
PTPRK-216ENST00000524481 SFI1A8K8P3 1242 aa13.19□□□□□ -0.3
PTPRK-216ENST00000524481 IKBKBO14920 756 aa13.19□□□□□ -0.3
PTPRK-216ENST00000524481 INPP5BP32019 993 aa13.19□□□□□ -0.3
PTPRK-216ENST00000524481 STK4Q13043 487 aa13.19□□□□□ -0.3
PTPRK-216ENST00000524481 STIM1Q13586 685 aa13.19□□□□□ -0.3
PTPRK-216ENST00000524481 NBPF12Q5TAG4 269 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-216ENST00000524481 PDXDC2PQ6P474 469 aa13.19□□□□□ -0.3
PTPRK-216ENST00000524481 SARM1Q6SZW1 724 aa13.19□□□□□ -0.3
PTPRK-216ENST00000524481 ANKRD20A12PQ8NF67 263 aa13.19□□□□□ -0.3
PTPRK-216ENST00000524481 LRRC15Q8TF66 581 aa13.19□□□□□ -0.3
PTPRK-216ENST00000524481 FAM151AQ8WW52 585 aa13.19□□□□□ -0.3
PTPRK-216ENST00000524481 NYAP2Q9P242 653 aa13.19□□□□□ -0.3
PTPRK-216ENST00000524481 PMS1P54277 932 aaKnown RBP13.19□□□□□ -0.3
PTPRK-216ENST00000524481 HDLBPQ00341 1268 aaKnown RBP13.19□□□□□ -0.3
PTPRK-216ENST00000524481 UBXN1Q04323 297 aa13.19□□□□□ -0.3
PTPRK-216ENST00000524481 SPP2Q13103 211 aa13.19□□□□□ -0.3
PTPRK-216ENST00000524481 PKNOX2Q96KN3 472 aa13.19□□□□□ -0.3
PTPRK-216ENST00000524481 MAGEC2Q9UBF1 373 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-216ENST00000524481 SAMM50Q9Y512 469 aa13.19□□□□□ -0.3
PTPRK-216ENST00000524481 CASZ1Q86V15 1759 aa13.19□□□□□ -0.3
PTPRK-216ENST00000524481 MYH1P12882 1939 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 IGKV6D-41A0A0C4DH26 115 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 POTEB3A0JP26 581 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 POTECB2RU33 542 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 ENTPD3O75355 529 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 SARSP49591 514 aaKnown RBP13.18□□□□□ -0.3
PTPRK-216ENST00000524481 PABPC4Q13310 644 aaKnown RBP eCLIP13.18□□□□□ -0.3
PTPRK-216ENST00000524481 POTEBQ6S5H4 581 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 NSMFQ6X4W1 530 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 KCNK18Q7Z418 384 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 IGSF22Q8N9C0 903 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 AGBL1Q96MI9 1066 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 RIC8AQ9NPQ8 531 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 PPP1R3GB7ZBB8 358 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 M0R2N6 131 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 FLOT1O75955 427 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 MTIF2P46199 727 aaKnown RBP13.18□□□□□ -0.3
PTPRK-216ENST00000524481 E2F4Q16254 413 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 SPATA1Q5VX52 437 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 CCAR2Q8N163 923 aaKnown RBP13.18□□□□□ -0.3
PTPRK-216ENST00000524481 CSGALNACT2Q8N6G5 542 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 ENOX1Q8TC92 643 aaKnown RBP13.18□□□□□ -0.3
PTPRK-216ENST00000524481 ARHGAP4P98171 946 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 GLIS3Q8NEA6 775 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 DEFB129Q9H1M3 183 aa13.18□□□□□ -0.3
PTPRK-216ENST00000524481 SCN9AQ15858 1988 aa13.17□□□□□ -0.3
PTPRK-216ENST00000524481 FAM237AA0A1B0GTK4 181 aa13.17□□□□□ -0.3
PTPRK-216ENST00000524481 POTEFA5A3E0 1075 aa13.17□□□□□ -0.3
PTPRK-216ENST00000524481 PSMA7O14818 248 aa13.17□□□□□ -0.3
PTPRK-216ENST00000524481 POTEIP0CG38 1075 aa13.17□□□□□ -0.3
PTPRK-216ENST00000524481 TATDN1Q6P1N9 297 aa13.17□□□□□ -0.3
PTPRK-216ENST00000524481 POTEGQ6S5H5 508 aa13.17□□□□□ -0.3
PTPRK-216ENST00000524481 POTEEQ6S8J3 1075 aa13.17□□□□□ -0.3
PTPRK-216ENST00000524481 TPH2Q8IWU9 490 aa13.17□□□□□ -0.3
PTPRK-216ENST00000524481 PIGOQ8TEQ8 1089 aa13.17□□□□□ -0.3
PTPRK-216ENST00000524481 EHD4Q9H223 541 aa13.17□□□□□ -0.3
PTPRK-216ENST00000524481 RAVER2Q9HCJ3 691 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms