RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 PRDM10Q9NQV6 1147 aa12.71□□□□□ -0.37
CLK4-206ENST00000520878 SUGT1Q9Y2Z0 365 aa12.71□□□□□ -0.37
CLK4-206ENST00000520878 B4DLN1 442 aa12.71□□□□□ -0.38
CLK4-206ENST00000520878 MEIS1O00470 390 aa12.71□□□□□ -0.38
CLK4-206ENST00000520878 SLC37A4O43826 429 aa12.71□□□□□ -0.38
CLK4-206ENST00000520878 ZBTB7AO95365 584 aa12.71□□□□□ -0.38
CLK4-206ENST00000520878 ETF1P62495 437 aaKnown RBP12.71□□□□□ -0.38
CLK4-206ENST00000520878 SLC15A2Q16348 729 aa12.71□□□□□ -0.38
CLK4-206ENST00000520878 HERC4Q5GLZ8 1057 aaPredicted RBP12.71□□□□□ -0.38
CLK4-206ENST00000520878 ZNF569Q5MCW4 686 aa12.71□□□□□ -0.38
CLK4-206ENST00000520878 CNGA4Q8IV77 575 aa12.71□□□□□ -0.38
CLK4-206ENST00000520878 LARP4BQ92615 738 aaKnown RBP12.71□□□□□ -0.38
CLK4-206ENST00000520878 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.71□□□□□ -0.38
CLK4-206ENST00000520878 TRAF5O00463 557 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 LAD1O00515 517 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 PLSCR1O15162 318 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 CCDC43Q96MW1 224 aaKnown RBP12.7□□□□□ -0.38
CLK4-206ENST00000520878 TSG101Q99816 390 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 CARD6Q9BX69 1037 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 HOMER2Q9NSB8 354 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 GUCA1BQ9UMX6 200 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 PDXDC2PQ6P474 469 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 CNNM4Q6P4Q7 775 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 CACNA2D4Q7Z3S7 1137 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 HSD3B7Q9H2F3 369 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 RWDD2AQ9UIY3 292 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 H7C1D1 291 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 BMP3P12645 472 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 STK4Q13043 487 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 ERCC6LQ2NKX8 1250 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 NIM1KQ8IY84 436 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 SUPT20HQ8NEM7 779 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 AK8Q96MA6 479 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 AMNQ9BXJ7 453 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 ARHGEF10LQ9HCE6 1279 aa12.7□□□□□ -0.38
CLK4-206ENST00000520878 NID2Q14112 1375 aa12.69□□□□□ -0.38
CLK4-206ENST00000520878 BICDL2A1A5D9 508 aa12.69□□□□□ -0.38
CLK4-206ENST00000520878 STAT3P40763 770 aa12.69□□□□□ -0.38
CLK4-206ENST00000520878 TCERG1LQ5VWI1 586 aa12.69□□□□□ -0.38
CLK4-206ENST00000520878 MTRQ99707 1265 aa12.69□□□□□ -0.38
CLK4-206ENST00000520878 IRX2Q9BZI1 471 aaPredicted RBP12.69□□□□□ -0.38
CLK4-206ENST00000520878 INTS13Q9NVM9 706 aa12.69□□□□□ -0.38
CLK4-206ENST00000520878 PSDA5PKW4 1024 aaPredicted RBP12.69□□□□□ -0.38
CLK4-206ENST00000520878 ARID5AQ03989 594 aa12.69□□□□□ -0.38
CLK4-206ENST00000520878 TCP11X2Q5H9J9 407 aa12.69□□□□□ -0.38
CLK4-206ENST00000520878 FAM207AQ9NSI2 230 aaPredicted RBP12.69□□□□□ -0.38
CLK4-206ENST00000520878 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
CLK4-206ENST00000520878 PUF60Q9UHX1 559 aaKnown RBP12.69□□□□□ -0.38
CLK4-206ENST00000520878 IRS2Q9Y4H2 1338 aa12.69□□□□□ -0.38
CLK4-206ENST00000520878 DDX39AO00148 427 aaKnown RBP12.69□□□□□ -0.38
CLK4-206ENST00000520878 STX10O60499 249 aa12.69□□□□□ -0.38
CLK4-206ENST00000520878 NR1I3Q14994 352 aa12.69□□□□□ -0.38
CLK4-206ENST00000520878 TMEM179Q6ZVK1 233 aa12.69□□□□□ -0.38
CLK4-206ENST00000520878 ACRBPQ8NEB7 543 aa12.69□□□□□ -0.38
CLK4-206ENST00000520878 TUBGCP2Q9BSJ2 902 aa12.69□□□□□ -0.38
CLK4-206ENST00000520878 NT5C2P49902 561 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 DNA2P51530 1060 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 E2F4Q16254 413 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 DACT2Q5SW24 774 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 NT5DC1Q5TFE4 455 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 FAM114A1Q8IWE2 563 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 ZNF397Q8NF99 534 aaPredicted RBP12.68□□□□□ -0.38
CLK4-206ENST00000520878 ZDHHC15Q96MV8 337 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 ANO3Q9BYT9 981 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 TRIM9Q9C026 710 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 CCSER1Q9C0I3 900 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 RIOX1Q9H6W3 641 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 ZBTB21Q9ULJ3 1066 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 SAMM50Q9Y512 469 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 BTAF1O14981 1849 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 DDX60Q8IY21 1712 aaKnown RBP12.68□□□□□ -0.38
CLK4-206ENST00000520878 E9PMD0 336 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 NDUFB10O96000 172 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 BAG6P46379 1132 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 PABPC4Q13310 644 aaKnown RBP eCLIP12.68□□□□□ -0.38
CLK4-206ENST00000520878 TDRD12Q587J7 1177 aaKnown RBP12.68□□□□□ -0.38
CLK4-206ENST00000520878 TC2NQ8N9U0 490 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 MED15Q96RN5 788 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.68□□□□□ -0.38
CLK4-206ENST00000520878 BCS1LQ9Y276 419 aa12.68□□□□□ -0.38
CLK4-206ENST00000520878 FAM170AA1A519 330 aa12.67□□□□□ -0.38
CLK4-206ENST00000520878 CCDC93Q567U6 631 aa12.67□□□□□ -0.38
CLK4-206ENST00000520878 GPBP1Q86WP2 473 aa12.67□□□□□ -0.38
CLK4-206ENST00000520878 P2RX5Q93086 422 aa12.67□□□□□ -0.38
CLK4-206ENST00000520878 AKT1S1Q96B36 256 aa12.67□□□□□ -0.38
CLK4-206ENST00000520878 CNOT6LQ96LI5 555 aaKnown RBP12.67□□□□□ -0.38
CLK4-206ENST00000520878 DRC1Q96MC2 740 aa12.67□□□□□ -0.38
CLK4-206ENST00000520878 ADD3Q9UEY8 706 aaKnown RBP12.67□□□□□ -0.38
CLK4-206ENST00000520878 A0A1B0GTH6 734 aa12.67□□□□□ -0.38
CLK4-206ENST00000520878 GOLGA6L9A6NEM1 432 aa12.67□□□□□ -0.38
CLK4-206ENST00000520878 ZNF18P17022 549 aa12.67□□□□□ -0.38
CLK4-206ENST00000520878 ECE1P42892 770 aa12.67□□□□□ -0.38
CLK4-206ENST00000520878 FXR1P51114 621 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLK4-206ENST00000520878 PMS1P54277 932 aaKnown RBP12.67□□□□□ -0.38
CLK4-206ENST00000520878 PRKG1Q13976 671 aa12.67□□□□□ -0.38
CLK4-206ENST00000520878 PLS1Q14651 629 aa12.67□□□□□ -0.38
CLK4-206ENST00000520878 SYCP1Q15431 976 aa12.67□□□□□ -0.38
CLK4-206ENST00000520878 SYDE2Q5VT97 1194 aa12.67□□□□□ -0.38
CLK4-206ENST00000520878 SLC30A10Q6XR72 485 aa12.67□□□□□ -0.38
CLK4-206ENST00000520878 MAEAQ7L5Y9 396 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms