RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 INPP5FQ9Y2H2 1132 aa5.32□□□□□ -1.56
HERC4-215ENST00000515753 E9PSI1 815 aa5.31□□□□□ -1.56
HERC4-215ENST00000515753 FGF10O15520 208 aaPredicted RBP5.31□□□□□ -1.56
HERC4-215ENST00000515753 IFNGR1P15260 489 aa5.31□□□□□ -1.56
HERC4-215ENST00000515753 EFEMP1Q12805 493 aa5.31□□□□□ -1.56
HERC4-215ENST00000515753 ZXDCQ2QGD7 858 aaPredicted RBP5.31□□□□□ -1.56
HERC4-215ENST00000515753 SPATS1Q496A3 300 aa5.31□□□□□ -1.56
HERC4-215ENST00000515753 UBXN11Q5T124 520 aa5.31□□□□□ -1.56
HERC4-215ENST00000515753 SHDQ96IW2 340 aa5.31□□□□□ -1.56
HERC4-215ENST00000515753 FCRL3Q96P31 734 aaPredicted RBP5.31□□□□□ -1.56
HERC4-215ENST00000515753 SRRTQ9BXP5 876 aaKnown RBP5.31□□□□□ -1.56
HERC4-215ENST00000515753 TMPRSS5Q9H3S3 457 aa5.31□□□□□ -1.56
HERC4-215ENST00000515753 GP6Q9HCN6 339 aa5.31□□□□□ -1.56
HERC4-215ENST00000515753 PDLIM7Q9NR12 457 aa5.31□□□□□ -1.56
HERC4-215ENST00000515753 USP40Q9NVE5 1235 aa5.31□□□□□ -1.56
HERC4-215ENST00000515753 FAN1Q9Y2M0 1017 aa5.31□□□□□ -1.56
HERC4-215ENST00000515753 SLC12A7Q9Y666 1083 aa5.31□□□□□ -1.56
HERC4-215ENST00000515753 PMF1-BGLAPU3KQ54 211 aa5.31□□□□□ -1.56
HERC4-215ENST00000515753 SRGAP3O43295 1099 aa5.3□□□□□ -1.56
HERC4-215ENST00000515753 CD3EP07766 207 aa5.3□□□□□ -1.56
HERC4-215ENST00000515753 ATF4P18848 351 aaPredicted RBP5.3□□□□□ -1.56
HERC4-215ENST00000515753 PMS1P54277 932 aaKnown RBP5.3□□□□□ -1.56
HERC4-215ENST00000515753 EIF6P56537 245 aaKnown RBP5.3□□□□□ -1.56
HERC4-215ENST00000515753 PUM1Q14671 1186 aaKnown RBP eCLIP5.3□□□□□ -1.56
HERC4-215ENST00000515753 ZYXQ15942 572 aaKnown RBP5.3□□□□□ -1.56
HERC4-215ENST00000515753 HHIPL2Q6UWX4 724 aa5.3□□□□□ -1.56
HERC4-215ENST00000515753 LIPIQ6XZB0 460 aa5.3□□□□□ -1.56
HERC4-215ENST00000515753 FIBCD1Q8N539 461 aa5.3□□□□□ -1.56
HERC4-215ENST00000515753 DDX1Q92499 740 aaKnown RBP5.3□□□□□ -1.56
HERC4-215ENST00000515753 NOL6Q9H6R4 1146 aaKnown RBP5.3□□□□□ -1.56
HERC4-215ENST00000515753 ZNF451Q9Y4E5 1061 aa5.3□□□□□ -1.56
HERC4-215ENST00000515753 ASGR2P07307 311 aa5.29□□□□□ -1.56
HERC4-215ENST00000515753 CD247P20963 164 aa5.29□□□□□ -1.56
HERC4-215ENST00000515753 NOP2P46087 812 aaKnown RBP5.29□□□□□ -1.56
HERC4-215ENST00000515753 NASPP49321 788 aaPredicted RBP5.29□□□□□ -1.56
HERC4-215ENST00000515753 CASP7P55210 303 aa5.29□□□□□ -1.56
HERC4-215ENST00000515753 CAP1Q01518 475 aa5.29□□□□□ -1.56
HERC4-215ENST00000515753 GNL2Q13823 731 aaKnown RBP5.29□□□□□ -1.56
HERC4-215ENST00000515753 FBXW10Q5XX13 1052 aa5.29□□□□□ -1.56
HERC4-215ENST00000515753 CYP2R1Q6VVX0 501 aa5.29□□□□□ -1.56
HERC4-215ENST00000515753 RUFY4Q6ZNE9 571 aa5.29□□□□□ -1.56
HERC4-215ENST00000515753 SLC43A3Q8NBI5 491 aa5.29□□□□□ -1.56
HERC4-215ENST00000515753 ZDHHC15Q96MV8 337 aa5.29□□□□□ -1.56
HERC4-215ENST00000515753 PTCHD1Q96NR3 888 aa5.29□□□□□ -1.56
HERC4-215ENST00000515753 CAPN10Q9HC96 672 aa5.29□□□□□ -1.56
HERC4-215ENST00000515753 DUSP10Q9Y6W6 482 aa5.29□□□□□ -1.56
HERC4-215ENST00000515753 FGRP09769 529 aa5.28□□□□□ -1.56
HERC4-215ENST00000515753 NCAM1P13591 858 aa5.28□□□□□ -1.56
HERC4-215ENST00000515753 PPP2R5DQ14738 602 aa5.28□□□□□ -1.56
HERC4-215ENST00000515753 ANKRD39Q53RE8 183 aa5.28□□□□□ -1.56
HERC4-215ENST00000515753 ZFYVE27Q5T4F4 411 aa5.28□□□□□ -1.56
HERC4-215ENST00000515753 UNC5AQ6ZN44 842 aa5.28□□□□□ -1.56
HERC4-215ENST00000515753 CCDC81Q6ZN84 652 aa5.28□□□□□ -1.56
HERC4-215ENST00000515753 SAPCD2Q86UD0 394 aa5.28□□□□□ -1.56
HERC4-215ENST00000515753 ALG3Q92685 438 aa5.28□□□□□ -1.56
HERC4-215ENST00000515753 BORCS6Q96GS4 357 aa5.28□□□□□ -1.56
HERC4-215ENST00000515753 CRBNQ96SW2 442 aa5.28□□□□□ -1.56
HERC4-215ENST00000515753 GMLQ99445 158 aa5.28□□□□□ -1.56
HERC4-215ENST00000515753 PHAXQ9H814 394 aaKnown RBP5.28□□□□□ -1.56
HERC4-215ENST00000515753 ZNF214Q9UL59 606 aaPredicted RBP5.28□□□□□ -1.56
HERC4-215ENST00000515753 K7ESM1 405 aa5.27□□□□□ -1.57
HERC4-215ENST00000515753 TBC1D8O95759 1140 aa5.27□□□□□ -1.57
HERC4-215ENST00000515753 L1CAMP32004 1257 aa5.27□□□□□ -1.57
HERC4-215ENST00000515753 CNR2P34972 360 aa5.27□□□□□ -1.57
HERC4-215ENST00000515753 HTRA3P83110 453 aa5.27□□□□□ -1.57
HERC4-215ENST00000515753 DLX2Q07687 328 aaPredicted RBP5.27□□□□□ -1.57
HERC4-215ENST00000515753 NOX5Q96PH1 765 aa5.27□□□□□ -1.57
HERC4-215ENST00000515753 GPR20Q99678 358 aa5.27□□□□□ -1.57
HERC4-215ENST00000515753 FBLN5Q9UBX5 448 aa5.27□□□□□ -1.57
HERC4-215ENST00000515753 SF3B6Q9Y3B4 125 aaKnown RBP5.27□□□□□ -1.57
HERC4-215ENST00000515753 RWDD3Q9Y3V2 267 aa5.27□□□□□ -1.57
HERC4-215ENST00000515753 FHOD1Q9Y613 1164 aa5.27□□□□□ -1.57
HERC4-215ENST00000515753 A0A1W2PQH9 124 aa5.26□□□□□ -1.57
HERC4-215ENST00000515753 SH3D21A4FU49 640 aa5.26□□□□□ -1.57
HERC4-215ENST00000515753 GLI4P10075 376 aa5.26□□□□□ -1.57
HERC4-215ENST00000515753 ITGA4P13612 1032 aa5.26□□□□□ -1.57
HERC4-215ENST00000515753 PMLP29590 882 aa5.26□□□□□ -1.57
HERC4-215ENST00000515753 VPS37DQ86XT2 251 aa5.26□□□□□ -1.57
HERC4-215ENST00000515753 ADCY4Q8NFM4 1077 aa5.26□□□□□ -1.57
HERC4-215ENST00000515753 MCMBPQ9BTE3 642 aa5.26□□□□□ -1.57
HERC4-215ENST00000515753 RNF38Q9H0F5 515 aa5.26□□□□□ -1.57
HERC4-215ENST00000515753 LTBP3Q9NS15 1303 aa5.25□□□□□ -1.57
HERC4-215ENST00000515753 NOBOXO60393 691 aa5.25□□□□□ -1.57
HERC4-215ENST00000515753 PPP1R11O60927 126 aaPredicted RBP5.25□□□□□ -1.57
HERC4-215ENST00000515753 CORO7P57737 925 aa5.25□□□□□ -1.57
HERC4-215ENST00000515753 POU4F1Q01851 419 aa5.25□□□□□ -1.57
HERC4-215ENST00000515753 B3GNT8Q7Z7M8 397 aa5.25□□□□□ -1.57
HERC4-215ENST00000515753 CARFQ8N187 725 aa5.25□□□□□ -1.57
HERC4-215ENST00000515753 NLGN2Q8NFZ4 835 aa5.25□□□□□ -1.57
HERC4-215ENST00000515753 SMARCC2Q8TAQ2 1214 aa5.25□□□□□ -1.57
HERC4-215ENST00000515753 C8orf37Q96NL8 207 aa5.25□□□□□ -1.57
HERC4-215ENST00000515753 STXBP3O00186 592 aa5.24□□□□□ -1.57
HERC4-215ENST00000515753 CBFA2T2O43439 604 aa5.24□□□□□ -1.57
HERC4-215ENST00000515753 VAMP4O75379 141 aa5.24□□□□□ -1.57
HERC4-215ENST00000515753 ZC3H6P61129 1189 aaKnown RBP5.24□□□□□ -1.57
HERC4-215ENST00000515753 ZNF827Q17R98 1081 aa5.24□□□□□ -1.57
HERC4-215ENST00000515753 DPY19L1Q2PZI1 675 aa5.24□□□□□ -1.57
HERC4-215ENST00000515753 TNNI3KQ59H18 835 aa5.24□□□□□ -1.57
HERC4-215ENST00000515753 CPNE8Q86YQ8 564 aa5.24□□□□□ -1.57
HERC4-215ENST00000515753 FAM169BQ8N8A8 192 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms