RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.27	□□□□□ -0.77
RACK1-222	ENST00000509535	PPP4R2	Q9NY27	417 aa		10.27	□□□□□ -0.77
RACK1-222	ENST00000509535	PRKAG3	Q9UGI9	489 aa		10.27	□□□□□ -0.77
RACK1-222	ENST00000509535	MYO15A	Q9UKN7	3530 aa		10.27	□□□□□ -0.77
RACK1-222	ENST00000509535	C19orf67	A6NJJ6	358 aa		10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	ATP2A1	O14983	1001 aa		10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	SMARCA5	O60264	1052 aa	Predicted RBP	10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	IQCF3	P0C7M6	154 aa		10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	IRS1	P35568	1242 aa		10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	ERVK-21	P61565	698 aa		10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	ANKRD45	Q5TZF3	282 aa		10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	TMED8	Q6PL24	325 aa	Predicted RBP	10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	PRPF38A	Q8NAV1	312 aa	Known RBP	10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	RETREG2	Q8NC44	543 aa		10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	CCDC17	Q96LX7	622 aa		10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	TGS1	Q96RS0	853 aa	Known RBP	10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	UPF3B	Q9BZI7	483 aa	Known RBP	10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	KANSL2	Q9H9L4	492 aa		10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	RAVER2	Q9HCJ3	691 aa	Known RBP	10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	PDGFC	Q9NRA1	345 aa		10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	FBXO40	Q9UH90	709 aa		10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	FAM50B	Q9Y247	325 aa		10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	EPG5	Q9HCE0	2579 aa		10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	GVINP1	Q7Z2Y8	2422 aa		10.26	□□□□□ -0.77
RACK1-222	ENST00000509535	LINC01553	A4QN01	128 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	PITPNM1	O00562	1244 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	ZBED4	O75132	1171 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	CDK8	P49336	464 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	WDR5	P61964	334 aa	Known RBP	10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	DEFB103A	P81534	67 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	FAM47C	Q5HY64	1035 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	TMEM63B	Q5T3F8	832 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	AACS	Q86V21	672 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	CHD1L	Q86WJ1	897 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	ADHFE1	Q8IWW8	467 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	FAM133A	Q8N9E0	248 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	CHST13	Q8NET6	341 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	HOMER2	Q9NSB8	354 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	FAM86C1	Q9NVL1	165 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	MUTYH	Q9UIF7	546 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535		Q9Y3F1	56 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	CACNA1G	O43497	2377 aa		10.25	□□□□□ -0.77
RACK1-222	ENST00000509535	ASB14	A6NK59	587 aa		10.24	□□□□□ -0.77
RACK1-222	ENST00000509535	IFIT2	P09913	472 aa	Known RBP	10.24	□□□□□ -0.77
RACK1-222	ENST00000509535	TCF15	Q12870	199 aa		10.24	□□□□□ -0.77
RACK1-222	ENST00000509535	HERC4	Q5GLZ8	1057 aa	Predicted RBP	10.24	□□□□□ -0.77
RACK1-222	ENST00000509535	IQSEC1	Q6DN90	963 aa		10.24	□□□□□ -0.77
RACK1-222	ENST00000509535	EP400NL	Q6ZTU2	488 aa		10.24	□□□□□ -0.77
RACK1-222	ENST00000509535	EEPD1	Q7L9B9	569 aa		10.24	□□□□□ -0.77
RACK1-222	ENST00000509535	FBXO22	Q8NEZ5	403 aa		10.24	□□□□□ -0.77
RACK1-222	ENST00000509535	PPP1R13L	Q8WUF5	828 aa		10.24	□□□□□ -0.77
RACK1-222	ENST00000509535	KIFC2	Q96AC6	838 aa		10.24	□□□□□ -0.77
RACK1-222	ENST00000509535	RAD9A	Q99638	391 aa		10.24	□□□□□ -0.77
RACK1-222	ENST00000509535	PRRX2	Q99811	253 aa		10.24	□□□□□ -0.77
RACK1-222	ENST00000509535	SLC38A10	Q9HBR0	1119 aa		10.24	□□□□□ -0.77
RACK1-222	ENST00000509535	POLR3E	Q9NVU0	708 aa		10.24	□□□□□ -0.77
RACK1-222	ENST00000509535	DDX49	Q9Y6V7	483 aa	Known RBP	10.24	□□□□□ -0.77
RACK1-222	ENST00000509535	ZNF292	O60281	2723 aa		10.24	□□□□□ -0.77
RACK1-222	ENST00000509535	MYH7B	A7E2Y1	1941 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	TPR	P12270	2363 aa	Known RBP	10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	CYP2D7	A0A087X1C5	515 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	SOWAHB	A6NEL2	793 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	GJB5	O95377	273 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	MYL3	P08590	195 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	PDE6A	P16499	860 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	ATP5J	P18859	108 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	PURA	Q00577	322 aa	Known RBP	10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	BFSP2	Q13515	415 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	NBPF20	Q3BBV1	942 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	SLC9C2	Q5TAH2	1124 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	TAPT1	Q6NXT6	567 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	C16orf86	Q6ZW13	317 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	BMP8A	Q7Z5Y6	402 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	FBXO16	Q8IX29	292 aa	Predicted RBP	10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	LCORL	Q8N3X6	602 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	PBXIP1	Q96AQ6	731 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	PABPC5	Q96DU9	382 aa	Known RBP	10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	MRPL38	Q96DV4	380 aa	Known RBP	10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	CCDC136	Q96JN2	1154 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	OSBPL3	Q9H4L5	887 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	TTC41P	Q6P2S7	1318 aa		10.23	□□□□□ -0.77
RACK1-222	ENST00000509535	DMXL1	Q9Y485	3027 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	USP17L12	C9JPN9	530 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	USP17L21	D6R901	530 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535		F5H6K3	240 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	NDUFB10	O96000	172 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	PDE4A	P27815	886 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	KLRC3	Q07444	240 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	TIGD5	Q53EQ6	642 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	C12orf60	Q5U649	245 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	B4GALNT3	Q6L9W6	998 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	FAM117B	Q6P1L5	589 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	KIAA1211	Q6ZU35	1233 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	RNF135	Q8IUD6	432 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	SUGP1	Q8IWZ8	645 aa	Known RBP	10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	OTUD7A	Q8TE49	926 aa	Predicted RBP	10.22	□□□□□ -0.77

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