RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 SPATA6Q9NWH7 488 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 NTMQ9P121 344 aa4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 ST6GALNAC2Q9UJ37 374 aa4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 DBR1Q9UK59 544 aaKnown RBP4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 H0Y8X5 98 aa4.09□□□□□ -1.75
DEPDC1B-204ENST00000509006 PMS1P54277 932 aaKnown RBP4.09□□□□□ -1.75
DEPDC1B-204ENST00000509006 ANKRD39Q53RE8 183 aa4.09□□□□□ -1.75
DEPDC1B-204ENST00000509006 CRB2Q5IJ48 1285 aa4.09□□□□□ -1.75
DEPDC1B-204ENST00000509006 SMARCC2Q8TAQ2 1214 aa4.09□□□□□ -1.75
DEPDC1B-204ENST00000509006 GIPC2Q8TF65 315 aa4.09□□□□□ -1.75
DEPDC1B-204ENST00000509006 DHRS1Q96LJ7 313 aa4.09□□□□□ -1.75
DEPDC1B-204ENST00000509006 BCL2L13Q9BXK5 485 aa4.09□□□□□ -1.75
DEPDC1B-204ENST00000509006 FGF10O15520 208 aaPredicted RBP4.08□□□□□ -1.76
DEPDC1B-204ENST00000509006 ACVRL1P37023 503 aa4.08□□□□□ -1.76
DEPDC1B-204ENST00000509006 SMAD4Q13485 552 aaKnown RBP4.08□□□□□ -1.76
DEPDC1B-204ENST00000509006 DCAF15Q66K64 600 aa4.08□□□□□ -1.76
DEPDC1B-204ENST00000509006 CRIP3Q6Q6R5 217 aa4.08□□□□□ -1.76
DEPDC1B-204ENST00000509006 CYP2R1Q6VVX0 501 aa4.08□□□□□ -1.76
DEPDC1B-204ENST00000509006 KIAA0825Q8IV33 1275 aa4.08□□□□□ -1.76
DEPDC1B-204ENST00000509006 CHST13Q8NET6 341 aa4.08□□□□□ -1.76
DEPDC1B-204ENST00000509006 ADAMTS17Q8TE56 1095 aa4.08□□□□□ -1.76
DEPDC1B-204ENST00000509006 DVL3Q92997 716 aaPredicted RBP4.08□□□□□ -1.76
DEPDC1B-204ENST00000509006 ZBTB8AQ96BR9 441 aa4.08□□□□□ -1.76
DEPDC1B-204ENST00000509006 SPON2Q9BUD6 331 aa4.08□□□□□ -1.76
DEPDC1B-204ENST00000509006 SSBP3Q9BWW4 388 aaPredicted RBP4.08□□□□□ -1.76
DEPDC1B-204ENST00000509006 FAM86C2PA6NEL3 165 aa4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 CYR61O00622 381 aa4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 GLI4P10075 376 aa4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 ZNF445P59923 1031 aa4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 CDSNQ15517 529 aa4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 ZYXQ15942 572 aaKnown RBP4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 AXDND1Q5T1B0 1012 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 TDRD10Q5VZ19 366 aaKnown RBP4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 CWF19L1Q69YN2 538 aaKnown RBP4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 CCDC144CPQ8IYA2 1237 aa4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 SMARCC1Q92922 1105 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 GZF1Q9H116 711 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 SLITRK6Q9H5Y7 841 aa4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 GP6Q9HCN6 339 aa4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 PODXL2Q9NZ53 605 aa4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 FBLN5Q9UBX5 448 aa4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 FHOD1Q9Y613 1164 aa4.07□□□□□ -1.76
DEPDC1B-204ENST00000509006 IMPDH2P12268 514 aa4.06□□□□□ -1.76
DEPDC1B-204ENST00000509006 CD247P20963 164 aa4.06□□□□□ -1.76
DEPDC1B-204ENST00000509006 CORO7P57737 925 aa4.06□□□□□ -1.76
DEPDC1B-204ENST00000509006 RGL3Q3MIN7 710 aa4.06□□□□□ -1.76
DEPDC1B-204ENST00000509006 ZNF326Q5BKZ1 582 aaKnown RBP4.06□□□□□ -1.76
DEPDC1B-204ENST00000509006 TTLL7Q6ZT98 887 aa4.06□□□□□ -1.76
DEPDC1B-204ENST00000509006 LIMS2Q7Z4I7 341 aa4.06□□□□□ -1.76
DEPDC1B-204ENST00000509006 RBBP8NLQ8NC74 664 aaPredicted RBP4.06□□□□□ -1.76
DEPDC1B-204ENST00000509006 NLGN2Q8NFZ4 835 aa4.06□□□□□ -1.76
DEPDC1B-204ENST00000509006 DDX11Q96FC9 970 aa4.06□□□□□ -1.76
DEPDC1B-204ENST00000509006 FCRL3Q96P31 734 aaPredicted RBP4.06□□□□□ -1.76
DEPDC1B-204ENST00000509006 TM9SF2Q99805 663 aa4.06□□□□□ -1.76
DEPDC1B-204ENST00000509006 INVSQ9Y283 1065 aa4.06□□□□□ -1.76
DEPDC1B-204ENST00000509006 CBFA2T2O43439 604 aa4.05□□□□□ -1.76
DEPDC1B-204ENST00000509006 IFNGR1P15260 489 aa4.05□□□□□ -1.76
DEPDC1B-204ENST00000509006 UNC5AQ6ZN44 842 aa4.05□□□□□ -1.76
DEPDC1B-204ENST00000509006 USP48Q86UV5 1035 aa4.05□□□□□ -1.76
DEPDC1B-204ENST00000509006 BRF1Q92994 677 aa4.05□□□□□ -1.76
DEPDC1B-204ENST00000509006 KISS1RQ969F8 398 aaPredicted RBP4.05□□□□□ -1.76
DEPDC1B-204ENST00000509006 TSPAN17Q96FV3 270 aa4.05□□□□□ -1.76
DEPDC1B-204ENST00000509006 PTCHD1Q96NR3 888 aa4.05□□□□□ -1.76
DEPDC1B-204ENST00000509006 SYT3Q9BQG1 590 aa4.05□□□□□ -1.76
DEPDC1B-204ENST00000509006 WDR26Q9H7D7 661 aa4.05□□□□□ -1.76
DEPDC1B-204ENST00000509006 TSC22D4Q9Y3Q8 395 aa4.05□□□□□ -1.76
DEPDC1B-204ENST00000509006 ZNF451Q9Y4E5 1061 aa4.05□□□□□ -1.76
DEPDC1B-204ENST00000509006 ZNF536O15090 1300 aa4.04□□□□□ -1.76
DEPDC1B-204ENST00000509006 FZD7O75084 574 aa4.04□□□□□ -1.76
DEPDC1B-204ENST00000509006 GUCY2CP25092 1073 aa4.04□□□□□ -1.76
DEPDC1B-204ENST00000509006 L1CAMP32004 1257 aa4.04□□□□□ -1.76
DEPDC1B-204ENST00000509006 FANCCQ00597 558 aa4.04□□□□□ -1.76
DEPDC1B-204ENST00000509006 CACNB2Q08289 660 aaPredicted RBP4.04□□□□□ -1.76
DEPDC1B-204ENST00000509006 RUFY4Q6ZNE9 571 aa4.04□□□□□ -1.76
DEPDC1B-204ENST00000509006 FIBCD1Q8N539 461 aa4.04□□□□□ -1.76
DEPDC1B-204ENST00000509006 TMEM87AQ8NBN3 555 aa4.04□□□□□ -1.76
DEPDC1B-204ENST00000509006 CPA5Q8WXQ8 436 aa4.04□□□□□ -1.76
DEPDC1B-204ENST00000509006 GORASP1Q9BQQ3 440 aa4.04□□□□□ -1.76
DEPDC1B-204ENST00000509006 MCMBPQ9BTE3 642 aa4.04□□□□□ -1.76
DEPDC1B-204ENST00000509006 ZNF747Q9BV97 191 aa4.04□□□□□ -1.76
DEPDC1B-204ENST00000509006 VPS11Q9H270 941 aa4.04□□□□□ -1.76
DEPDC1B-204ENST00000509006 ZNF214Q9UL59 606 aaPredicted RBP4.04□□□□□ -1.76
DEPDC1B-204ENST00000509006 RWDD3Q9Y3V2 267 aa4.04□□□□□ -1.76
DEPDC1B-204ENST00000509006 LTBP3Q9NS15 1303 aa4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 A0A087WZG4 1122 aa4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 SMARCA5O60264 1052 aaPredicted RBP4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 TP53P04637 393 aaPredicted RBP4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 C8BP07358 591 aa4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 CD3EP07766 207 aa4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 ZNF16P17020 682 aaPredicted RBP4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 ZNF76P36508 570 aa4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 NOP2P46087 812 aaKnown RBP4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 RACK1P63244 317 aaKnown RBP4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 KLF10Q13118 480 aa4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 ICAM4Q14773 271 aa4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 ZNF394Q53GI3 561 aa4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 NOL9Q5SY16 702 aaKnown RBP4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 C9orf131Q5VYM1 1079 aa4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 GLB1LQ6UWU2 654 aa4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 CABP7Q86V35 215 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms