RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 PLEKHA4Q9H4M7 779 aa12.95□□□□□ -0.34
ITGA3-208ENST00000506437 VCPKMTQ9H867 229 aa12.95□□□□□ -0.34
ITGA3-208ENST00000506437 MED4Q9NPJ6 270 aa12.95□□□□□ -0.34
ITGA3-208ENST00000506437 FLOT1O75955 427 aa12.95□□□□□ -0.34
ITGA3-208ENST00000506437 CDKL5O76039 1030 aa12.95□□□□□ -0.34
ITGA3-208ENST00000506437 VCAM1P19320 739 aa12.95□□□□□ -0.34
ITGA3-208ENST00000506437 NOVP48745 357 aa12.95□□□□□ -0.34
ITGA3-208ENST00000506437 GADL1Q6ZQY3 521 aa12.95□□□□□ -0.34
ITGA3-208ENST00000506437 ZNF280CQ8ND82 737 aa12.95□□□□□ -0.34
ITGA3-208ENST00000506437 ZC3H15Q8WU90 426 aaKnown RBP12.95□□□□□ -0.34
ITGA3-208ENST00000506437 OPTNQ96CV9 577 aa12.95□□□□□ -0.34
ITGA3-208ENST00000506437 BORCS6Q96GS4 357 aa12.95□□□□□ -0.34
ITGA3-208ENST00000506437 RBM28Q9NW13 759 aaKnown RBP12.95□□□□□ -0.34
ITGA3-208ENST00000506437 MRVI1Q9Y6F6 885 aa12.95□□□□□ -0.34
ITGA3-208ENST00000506437 SCN4AP35499 1836 aa12.95□□□□□ -0.34
ITGA3-208ENST00000506437 EIF3CLB5ME19 914 aaKnown RBP12.94□□□□□ -0.34
ITGA3-208ENST00000506437 WNT7AO00755 349 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 GJA5P36382 358 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 UBE2SQ16763 222 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 MKL1Q969V6 931 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 EIF3CQ99613 913 aaKnown RBP12.94□□□□□ -0.34
ITGA3-208ENST00000506437 EPC1Q9H2F5 836 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 RPAP3Q9H6T3 665 aaPredicted RBP12.94□□□□□ -0.34
ITGA3-208ENST00000506437 SLC24A3Q9HC58 644 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 ZC3H4Q9UPT8 1303 aaKnown RBP12.94□□□□□ -0.34
ITGA3-208ENST00000506437 DEXIO95424 95 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 SCG2P13521 617 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 IREB2P48200 963 aaKnown RBP12.94□□□□□ -0.34
ITGA3-208ENST00000506437 NLRP5P59047 1200 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 DIS3L2Q8IYB7 885 aaKnown RBP12.94□□□□□ -0.34
ITGA3-208ENST00000506437 TBC1D5Q92609 795 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 MTA3Q9BTC8 594 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 TMEM260Q9NX78 707 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 CWC15Q9P013 229 aaKnown RBP12.94□□□□□ -0.34
ITGA3-208ENST00000506437 GREB1LQ9C091 1923 aaPredicted RBP12.94□□□□□ -0.34
ITGA3-208ENST00000506437 WDR33Q9C0J8 1336 aaKnown RBP12.94□□□□□ -0.34
ITGA3-208ENST00000506437 SNHG28P0DPA3 235 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 H2AFXP16104 143 aaPredicted RBP12.94□□□□□ -0.34
ITGA3-208ENST00000506437 NAPAP54920 295 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 QRICH1Q2TAL8 776 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 CCDC178Q5BJE1 867 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 LDHDQ86WU2 507 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 CEP120Q8N960 986 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 CACTINQ8WUQ7 758 aaKnown RBP12.94□□□□□ -0.34
ITGA3-208ENST00000506437 GOPCQ9HD26 462 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 ZNF112Q9UJU3 913 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 PRR12Q9ULL5 1215 aa12.94□□□□□ -0.34
ITGA3-208ENST00000506437 COL2A1P02458 1487 aaPredicted RBP12.94□□□□□ -0.34
ITGA3-208ENST00000506437 MAGEA9P43362 315 aa12.93□□□□□ -0.34
ITGA3-208ENST00000506437 BACE1P56817 501 aa12.93□□□□□ -0.34
ITGA3-208ENST00000506437 TRIM29Q14134 588 aa12.93□□□□□ -0.34
ITGA3-208ENST00000506437 CDC37Q16543 378 aaPredicted RBP12.93□□□□□ -0.34
ITGA3-208ENST00000506437 MCTP2Q6DN12 878 aa12.93□□□□□ -0.34
ITGA3-208ENST00000506437 AGBL1Q96MI9 1066 aa12.93□□□□□ -0.34
ITGA3-208ENST00000506437 RNF26Q9BY78 433 aaPredicted RBP12.93□□□□□ -0.34
ITGA3-208ENST00000506437 R3HDMLQ9H3Y0 253 aa12.93□□□□□ -0.34
ITGA3-208ENST00000506437 BIN2Q9UBW5 565 aaPredicted RBP12.93□□□□□ -0.34
ITGA3-208ENST00000506437 SEC63Q9UGP8 760 aaKnown RBP12.93□□□□□ -0.34
ITGA3-208ENST00000506437 PRPF3O43395 683 aaKnown RBP12.93□□□□□ -0.34
ITGA3-208ENST00000506437 ITGBL1O95965 494 aaPredicted RBP12.93□□□□□ -0.34
ITGA3-208ENST00000506437 STAT2P52630 851 aa12.93□□□□□ -0.34
ITGA3-208ENST00000506437 ARHGAP29Q52LW3 1261 aa12.93□□□□□ -0.34
ITGA3-208ENST00000506437 JAKMIP3Q5VZ66 844 aa12.93□□□□□ -0.34
ITGA3-208ENST00000506437 LUZP1Q86V48 1076 aa12.93□□□□□ -0.34
ITGA3-208ENST00000506437 RRP36Q96EU6 259 aaKnown RBP12.93□□□□□ -0.34
ITGA3-208ENST00000506437 ERO1AQ96HE7 468 aa12.93□□□□□ -0.34
ITGA3-208ENST00000506437 USP17L15C9J2P7 530 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 USP17L13C9JLJ4 530 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 USP17L11C9JVI0 530 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 USP17L18D6R9N7 530 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 USP17L22D6RA61 530 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 USP17L17D6RBQ6 530 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 USP17L19D6RCP7 530 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 USP17L20D6RJB6 530 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 HOXA13P31271 388 aaPredicted RBP12.92□□□□□ -0.34
ITGA3-208ENST00000506437 USP17L24Q0WX57 530 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 PLS1Q14651 629 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 USP17L6PQ6QN14 398 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 GBA2Q9HCG7 927 aaPredicted RBP12.92□□□□□ -0.34
ITGA3-208ENST00000506437 WDR90Q96KV7 1748 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 SASH3O75995 380 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 HUNKP57058 714 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 PFKFB3Q16875 520 aaPredicted RBP12.92□□□□□ -0.34
ITGA3-208ENST00000506437 ASPRV1Q53RT3 343 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 ATG4CQ96DT6 458 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 SLC10A4Q96EP9 437 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 PURBQ96QR8 312 aaKnown RBP12.92□□□□□ -0.34
ITGA3-208ENST00000506437 RAVER2Q9HCJ3 691 aaKnown RBP12.92□□□□□ -0.34
ITGA3-208ENST00000506437 AFG3L2Q9Y4W6 797 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 PPP2R3BQ9Y5P8 575 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 KIF1CO43896 1103 aaKnown RBP12.92□□□□□ -0.34
ITGA3-208ENST00000506437 PDCP20941 246 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 YY1P25490 414 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 TPM4P67936 248 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 UBXN2AP68543 259 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 KIF23Q02241 960 aaPredicted RBP12.92□□□□□ -0.34
ITGA3-208ENST00000506437 RESTQ13127 1097 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 CCDC183Q5T5S1 534 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 SYDE2Q5VT97 1194 aa12.92□□□□□ -0.34
ITGA3-208ENST00000506437 ANKRD13AQ8IZ07 590 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms