RNA–Protein interactions for RNA: ENST00000502865.5

SFXN1-204, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 641 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-204ENST00000502865 GRIN1Q05586 938 aa11.12□□□□□ -0.63
SFXN1-204ENST00000502865 TRAF1Q13077 416 aa11.12□□□□□ -0.63
SFXN1-204ENST00000502865 CCL15Q16663 113 aa11.12□□□□□ -0.63
SFXN1-204ENST00000502865 AXDND1Q5T1B0 1012 aaPredicted RBP11.12□□□□□ -0.63
SFXN1-204ENST00000502865 SAPCD2Q86UD0 394 aa11.12□□□□□ -0.63
SFXN1-204ENST00000502865 BRI3BPQ8WY22 251 aa11.12□□□□□ -0.63
SFXN1-204ENST00000502865 ANO3Q9BYT9 981 aa11.12□□□□□ -0.63
SFXN1-204ENST00000502865 GLT8D2Q9H1C3 349 aa11.12□□□□□ -0.63
SFXN1-204ENST00000502865 FBXO2Q9UK22 296 aaPredicted RBP11.12□□□□□ -0.63
SFXN1-204ENST00000502865 CTDP1Q9Y5B0 961 aaPredicted RBP11.12□□□□□ -0.63
SFXN1-204ENST00000502865 DDX49Q9Y6V7 483 aaKnown RBP11.12□□□□□ -0.63
SFXN1-204ENST00000502865 BTBD19C9JJ37 291 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 GCOM1H8Y6P7 765 aaPredicted RBP11.11□□□□□ -0.63
SFXN1-204ENST00000502865 ATP2A1O14983 1001 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 PPP6R2O75170 966 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 POLR2MP0CAP2 368 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 CETPP11597 493 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 LIG1P18858 919 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 MCM7P33993 719 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 ME1P48163 572 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 HSD17B4P51659 736 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 GTF2A2P52657 109 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 OAZ1P54368 228 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 IRX3P78415 501 aaPredicted RBP11.11□□□□□ -0.63
SFXN1-204ENST00000502865 IL17AQ16552 155 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 LETM2Q2VYF4 491 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 SNRNP48Q6IEG0 339 aaKnown RBP11.11□□□□□ -0.63
SFXN1-204ENST00000502865 LBX2Q6XYB7 198 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 NEK8Q86SG6 692 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 FCHSD1Q86WN1 690 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 RASAL3Q86YV0 1011 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 SMC1BQ8NDV3 1235 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 KCNG4Q8TDN1 519 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 CRYGNQ8WXF5 182 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 CLIC6Q96NY7 704 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 TRERF1Q96PN7 1200 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 PTPN18Q99952 460 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 TMEM60Q9H2L4 133 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 R3HDMLQ9H3Y0 253 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 HOMER2Q9NSB8 354 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 COL20A1Q9P218 1284 aa11.11□□□□□ -0.63
SFXN1-204ENST00000502865 RBBP6Q7Z6E9 1792 aaKnown RBP11.11□□□□□ -0.63
SFXN1-204ENST00000502865 TOMM70O94826 608 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 TDP2O95551 362 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 FOSP01100 380 aaPredicted RBP11.1□□□□□ -0.63
SFXN1-204ENST00000502865 ZBTB48P10074 688 aaPredicted RBP11.1□□□□□ -0.63
SFXN1-204ENST00000502865 CYP2C8P10632 490 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 OSBPP22059 807 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 PTPREP23469 700 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 STAT3P40763 770 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 ZNF157P51786 506 aaPredicted RBP11.1□□□□□ -0.63
SFXN1-204ENST00000502865 HERVK_113P62684 666 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 ATP2C1P98194 919 aaPredicted RBP11.1□□□□□ -0.63
SFXN1-204ENST00000502865 GHRHRQ02643 423 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 PTGDRQ13258 359 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 AP3B2Q13367 1082 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 KLHL40Q2TBA0 621 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 SKOR2Q2VWA4 1001 aaPredicted RBP11.1□□□□□ -0.63
SFXN1-204ENST00000502865 Q3C1V9 767 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 ADALQ6DHV7 355 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 RGMBQ6NW40 437 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 FAM43AQ8N2R8 423 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 GOLPH3LQ9H4A5 285 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 TXNRD2Q9NNW7 524 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 RNF146Q9NTX7 359 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 RBPJLQ9UBG7 517 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 CEP131Q9UPN4 1083 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 TLL2Q9Y6L7 1015 aa11.1□□□□□ -0.63
SFXN1-204ENST00000502865 MORC2Q9Y6X9 1032 aaPredicted RBP11.1□□□□□ -0.63
SFXN1-204ENST00000502865 TESPA1A2RU30 521 aaPredicted RBP11.09□□□□□ -0.63
SFXN1-204ENST00000502865 GOLGA6L4A6NEF3 574 aa11.09□□□□□ -0.63
SFXN1-204ENST00000502865 PDHXO00330 501 aa11.09□□□□□ -0.63
SFXN1-204ENST00000502865 CCNT1O60563 726 aaKnown RBP11.09□□□□□ -0.63
SFXN1-204ENST00000502865 CUTAO60888 179 aa11.09□□□□□ -0.63
SFXN1-204ENST00000502865 PABPC4Q13310 644 aaKnown RBP eCLIP11.09□□□□□ -0.63
SFXN1-204ENST00000502865 PLS1Q14651 629 aa11.09□□□□□ -0.63
SFXN1-204ENST00000502865 SHC4Q6S5L8 630 aa11.09□□□□□ -0.63
SFXN1-204ENST00000502865 SLC30A10Q6XR72 485 aa11.09□□□□□ -0.63
SFXN1-204ENST00000502865 ANKRD23Q86SG2 305 aa11.09□□□□□ -0.63
SFXN1-204ENST00000502865 MCF2L2Q86YR7 1114 aa11.09□□□□□ -0.63
SFXN1-204ENST00000502865 CCAR1Q8IX12 1150 aaKnown RBP11.09□□□□□ -0.63
SFXN1-204ENST00000502865 PURBQ96QR8 312 aaKnown RBP11.09□□□□□ -0.63
SFXN1-204ENST00000502865 PAGR1Q9BTK6 254 aa11.09□□□□□ -0.63
SFXN1-204ENST00000502865 TEX13BQ9BXU2 312 aa11.09□□□□□ -0.63
SFXN1-204ENST00000502865 TMEM63CQ9P1W3 806 aa11.09□□□□□ -0.63
SFXN1-204ENST00000502865 PNMA2Q9UL42 364 aa11.09□□□□□ -0.63
SFXN1-204ENST00000502865 SRPRBQ9Y5M8 271 aaKnown RBP11.09□□□□□ -0.63
SFXN1-204ENST00000502865 LCTP09848 1927 aa11.08□□□□□ -0.64
SFXN1-204ENST00000502865 CYP3A7-CYP3A51PA0A087WV96 503 aa11.08□□□□□ -0.64
SFXN1-204ENST00000502865 A0A1B0GVL5 298 aa11.08□□□□□ -0.64
SFXN1-204ENST00000502865 A0A1W2PQ27 194 aa11.08□□□□□ -0.64
SFXN1-204ENST00000502865 A0A1W2PQ64 194 aa11.08□□□□□ -0.64
SFXN1-204ENST00000502865 A0A1W2PQD8 194 aa11.08□□□□□ -0.64
SFXN1-204ENST00000502865 SPDYE3A6NKU9 549 aa11.08□□□□□ -0.64
SFXN1-204ENST00000502865 FAM155AB1AL88 458 aaPredicted RBP11.08□□□□□ -0.64
SFXN1-204ENST00000502865 SLC37A4O43826 429 aa11.08□□□□□ -0.64
SFXN1-204ENST00000502865 MBD3O95983 291 aa11.08□□□□□ -0.64
SFXN1-204ENST00000502865 SLC10A3P09131 477 aa11.08□□□□□ -0.64
SFXN1-204ENST00000502865 CYP3A7P24462 503 aa11.08□□□□□ -0.64
SFXN1-204ENST00000502865 SREBF1P36956 1147 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms