RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 ATP11BQ9Y2G3 1177 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 USP17L12C9JPN9 530 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 USP17L21D6R901 530 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 NDUFS2O75306 463 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 ESRRBO95718 433 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 CAVIN2O95810 425 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 TMEM259Q4ZIN3 620 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 DHX32Q7L7V1 743 aaKnown RBP5.89□□□□□ -1.47
FN1-224ENST00000492816 PANK2Q9BZ23 570 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 SBNO2Q9Y2G9 1366 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 OVOS2A0A0G2JMS6 1433 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 OVOS2A0A0J9YW53 1432 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 OVOS2Q6IE36 1432 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 SOX5P35711 763 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 PIK3AP1Q6ZUJ8 805 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 SNX29Q8TEQ0 813 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 ASIC4Q96FT7 647 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 NUF2Q9BZD4 464 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 ABCA10Q8WWZ4 1543 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 PCP11498 1178 aaKnown RBP5.89□□□□□ -1.47
FN1-224ENST00000492816 NEDD9Q14511 834 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 MTERF4Q7Z6M4 381 aaKnown RBP5.89□□□□□ -1.47
FN1-224ENST00000492816 C10orf67Q8IYJ2 551 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 BEST2Q8NFU1 509 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 ACAP3Q96P50 834 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 TRPC7Q9HCX4 862 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 FEZ2Q9UHY8 353 aaPredicted RBP5.89□□□□□ -1.47
FN1-224ENST00000492816 SETD1BQ9UPS6 1966 aaKnown RBP5.89□□□□□ -1.47
FN1-224ENST00000492816 ARAP1Q96P48 1450 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 K7ENM7 598 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 SYNCRIPO60506 623 aaKnown RBP5.89□□□□□ -1.47
FN1-224ENST00000492816 KPNA2P52292 529 aaKnown RBP5.89□□□□□ -1.47
FN1-224ENST00000492816 IRX4P78413 519 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 EZH2Q15910 746 aaKnown RBP5.89□□□□□ -1.47
FN1-224ENST00000492816 DNAJC21Q5F1R6 531 aaKnown RBP5.89□□□□□ -1.47
FN1-224ENST00000492816 PDXDC2PQ6P474 469 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 MTFR1LQ9H019 292 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 PLCB1Q9NQ66 1216 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 BCAP29Q9UHQ4 241 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 CCL15-CCL14A0A0B4J2E2 113 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 CCDC66A2RUB6 948 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 MANSC4A6NHS7 340 aaPredicted RBP5.89□□□□□ -1.47
FN1-224ENST00000492816 CCL15Q16663 113 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 OSCP1Q8WVF1 389 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 WDR11Q9BZH6 1224 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 TTLL1O95922 423 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 SRGAP2CP0DJJ0 459 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 ASPRV1Q53RT3 343 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 FOXP4Q8IVH2 680 aaPredicted RBP5.89□□□□□ -1.47
FN1-224ENST00000492816 SMC5Q8IY18 1101 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 TMEM169Q96HH4 297 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 ECT2Q9H8V3 914 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 ABI2Q9NYB9 513 aaPredicted RBP5.89□□□□□ -1.47
FN1-224ENST00000492816 USTQ9Y2C2 406 aa5.89□□□□□ -1.47
FN1-224ENST00000492816 KCNQ2O43526 872 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 PMLP29590 882 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 IL6STP40189 918 aaPredicted RBP5.88□□□□□ -1.47
FN1-224ENST00000492816 TXKP42681 527 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 ALDH7A1P49419 539 aaKnown RBP5.88□□□□□ -1.47
FN1-224ENST00000492816 PPP2R3AQ06190 1150 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 ASIC2Q16515 512 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 RRAGCQ9HB90 399 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 SOS2Q07890 1332 aaPredicted RBP5.88□□□□□ -1.47
FN1-224ENST00000492816 RAPGEF6Q8TEU7 1601 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 OPLAHO14841 1288 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 GNRH1P01148 92 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 CCHCR1Q8TD31 782 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 EIF3CQ99613 913 aaKnown RBP5.88□□□□□ -1.47
FN1-224ENST00000492816 TMEM39AQ9NV64 488 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 SYNJ2BP-COX16A0A087WUM0 186 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 NEMFO60524 1076 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 WDR48Q8TAF3 677 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 ARMT1Q9H993 441 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 COX16Q9P0S2 106 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 TRIM17Q9Y577 477 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.88□□□□□ -1.47
FN1-224ENST00000492816 USH1CQ9Y6N9 552 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 SBNO1A3KN83 1393 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 TTC41PQ6P2S7 1318 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 USP17L15C9J2P7 530 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 USP17L13C9JLJ4 530 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 USP17L11C9JVI0 530 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 USP17L18D6R9N7 530 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 USP17L22D6RA61 530 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 USP17L17D6RBQ6 530 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 USP17L19D6RCP7 530 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 USP17L20D6RJB6 530 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 SUN1O94901 812 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 PAX3P23760 479 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 COG7P83436 770 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 USP17L24Q0WX57 530 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 ANKS6Q68DC2 871 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 FAM149B1Q96BN6 582 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 HDAC11Q96DB2 347 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 CCDC42Q96M95 316 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 KIF2CQ99661 725 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 RAB20Q9NX57 234 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 KDM5CP41229 1560 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 ZFYVE9O95405 1425 aa5.88□□□□□ -1.47
FN1-224ENST00000492816 POLR3AO14802 1390 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms