RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 NBPF10Q6P3W6 841 aaKnown RBP17.89■□□□□ 0.45
MCF2L-229ENST00000488765 NBPF15Q8N660 670 aa17.89■□□□□ 0.45
MCF2L-229ENST00000488765 UHMK1Q8TAS1 419 aaKnown RBP17.89■□□□□ 0.45
MCF2L-229ENST00000488765 IFIH1Q9BYX4 1025 aaKnown RBP17.89■□□□□ 0.45
MCF2L-229ENST00000488765 HELLSQ9NRZ9 838 aa17.89■□□□□ 0.45
MCF2L-229ENST00000488765 ASAP1Q9ULH1 1129 aa17.89■□□□□ 0.45
MCF2L-229ENST00000488765 TLDC2A0PJX2 215 aa17.89■□□□□ 0.45
MCF2L-229ENST00000488765 NUTM2BA6NNL0 878 aaPredicted RBP17.89■□□□□ 0.45
MCF2L-229ENST00000488765 NUTM2EB1AL46 878 aaPredicted RBP17.89■□□□□ 0.45
MCF2L-229ENST00000488765 LINGO3P0C6S8 592 aa17.89■□□□□ 0.45
MCF2L-229ENST00000488765 CTNNA1P35221 906 aaKnown RBP17.89■□□□□ 0.45
MCF2L-229ENST00000488765 SLC8A3P57103 927 aa17.89■□□□□ 0.45
MCF2L-229ENST00000488765 PLCB4Q15147 1175 aa17.89■□□□□ 0.45
MCF2L-229ENST00000488765 LRRC24Q50LG9 513 aa17.89■□□□□ 0.45
MCF2L-229ENST00000488765 C2CD5Q86YS7 1000 aa17.89■□□□□ 0.45
MCF2L-229ENST00000488765 MMGT1Q8N4V1 131 aa17.89■□□□□ 0.45
MCF2L-229ENST00000488765 BTG4Q9NY30 223 aa17.89■□□□□ 0.45
MCF2L-229ENST00000488765 MEGF6O75095 1541 aa17.88■□□□□ 0.45
MCF2L-229ENST00000488765 CYLC1P35663 651 aaPredicted RBP17.88■□□□□ 0.45
MCF2L-229ENST00000488765 DNAAF5Q86Y56 855 aa17.88■□□□□ 0.45
MCF2L-229ENST00000488765 IFT20Q8IY31 132 aa17.88■□□□□ 0.45
MCF2L-229ENST00000488765 HOOK2Q96ED9 719 aa17.88■□□□□ 0.45
MCF2L-229ENST00000488765 FAM89AQ96GI7 184 aa17.88■□□□□ 0.45
MCF2L-229ENST00000488765 TRIM31Q9BZY9 425 aa17.88■□□□□ 0.45
MCF2L-229ENST00000488765 GOLPH3Q9H4A6 298 aa17.88■□□□□ 0.45
MCF2L-229ENST00000488765 ANGEL1Q9UNK9 670 aaKnown RBP17.88■□□□□ 0.45
MCF2L-229ENST00000488765 TRIM33Q9UPN9 1127 aa17.88■□□□□ 0.45
MCF2L-229ENST00000488765 SPATA31A3Q5VYP0 1347 aa17.88■□□□□ 0.45
MCF2L-229ENST00000488765 TACC1O75410 805 aa17.88■□□□□ 0.45
MCF2L-229ENST00000488765 SMNDC1O75940 238 aaKnown RBP eCLIP17.88■□□□□ 0.45
MCF2L-229ENST00000488765 RASSF7Q02833 373 aa17.88■□□□□ 0.45
MCF2L-229ENST00000488765 SSRP1Q08945 709 aaKnown RBP17.88■□□□□ 0.45
MCF2L-229ENST00000488765 PAK1Q13153 545 aa17.88■□□□□ 0.45
MCF2L-229ENST00000488765 MB21D1Q8N884 522 aa17.88■□□□□ 0.45
MCF2L-229ENST00000488765 ELAC2Q9BQ52 826 aaKnown RBP17.88■□□□□ 0.45
MCF2L-229ENST00000488765 MTFR1LQ9H019 292 aa17.88■□□□□ 0.45
MCF2L-229ENST00000488765 FAM207AQ9NSI2 230 aaPredicted RBP17.88■□□□□ 0.45
MCF2L-229ENST00000488765 NFAT5O94916 1531 aa17.88■□□□□ 0.45
MCF2L-229ENST00000488765 FLT3P36888 993 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 PRCPP42785 496 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 CTCFP49711 727 aaPredicted RBP17.87■□□□□ 0.45
MCF2L-229ENST00000488765 XRCC4Q13426 336 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 TBC1D25Q3MII6 688 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 SLC30A9Q6PML9 568 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 MAB21L3Q8N8X9 362 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 FAM237AA0A1B0GTK4 181 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 ANKRD33BA6NCL7 494 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 TRAPPC3O43617 180 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 ABL2P42684 1182 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 PAK2Q13177 524 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 TBC1D10CQ8IV04 446 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 AGAP1Q9UPQ3 857 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 SH3TC1Q8TE82 1336 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 SPDYE5A6NIY4 337 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 CTNND1O60716 968 aaKnown RBP17.87■□□□□ 0.45
MCF2L-229ENST00000488765 TMEM67Q5HYA8 995 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 TRIML1Q8N9V2 468 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 CCT6BQ92526 530 aa17.87■□□□□ 0.45
MCF2L-229ENST00000488765 PAPOLBQ9NRJ5 636 aaKnown RBP17.87■□□□□ 0.45
MCF2L-229ENST00000488765 AKR1B10O60218 316 aa17.86■□□□□ 0.45
MCF2L-229ENST00000488765 TRIM37O94972 964 aa17.86■□□□□ 0.45
MCF2L-229ENST00000488765 TUBP50607 506 aa17.86■□□□□ 0.45
MCF2L-229ENST00000488765 RPUSD2Q8IZ73 545 aaKnown RBP17.86■□□□□ 0.45
MCF2L-229ENST00000488765 SELENOSQ9BQE4 189 aa17.86■□□□□ 0.45
MCF2L-229ENST00000488765 OSBPL1AQ9BXW6 950 aa17.86■□□□□ 0.45
MCF2L-229ENST00000488765 DPPA5A6NC42 116 aa17.86■□□□□ 0.45
MCF2L-229ENST00000488765 RPS6KL1Q9Y6S9 549 aa17.86■□□□□ 0.45
MCF2L-229ENST00000488765 ATXN2Q99700 1313 aaKnown RBP17.86■□□□□ 0.45
MCF2L-229ENST00000488765 KDM6AO15550 1401 aaPredicted RBP17.86■□□□□ 0.45
MCF2L-229ENST00000488765 POLE2P56282 527 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 RNASELQ05823 741 aaKnown RBP17.85■□□□□ 0.45
MCF2L-229ENST00000488765 SCARF1Q14162 830 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 FAM47EQ6ZV65 393 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 IRF2BP1Q8IU81 584 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 ITFG2Q969R8 447 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 TSC22D3Q99576 134 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 PUS3Q9BZE2 481 aaKnown RBP17.85■□□□□ 0.45
MCF2L-229ENST00000488765 CCDC113Q9H0I3 377 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 TMEM165Q9HC07 324 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.85■□□□□ 0.45
MCF2L-229ENST00000488765 SHBGP04278 402 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 LAMB3Q13751 1172 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 CCDC47Q96A33 483 aaKnown RBP17.85■□□□□ 0.45
MCF2L-229ENST00000488765 TRIM47Q96LD4 638 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 F8W031 263 aaPredicted RBP17.85■□□□□ 0.45
MCF2L-229ENST00000488765 ADORA1P30542 326 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 HSD17B3P37058 310 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 ARID5AQ03989 594 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 TRIM58Q8NG06 486 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 ACSBG1Q96GR2 724 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 FAM217BQ9NTX9 383 aaPredicted RBP17.85■□□□□ 0.45
MCF2L-229ENST00000488765 ABCF3Q9NUQ8 709 aa17.85■□□□□ 0.45
MCF2L-229ENST00000488765 LIMA1Q9UHB6 759 aaKnown RBP17.85■□□□□ 0.45
MCF2L-229ENST00000488765 MYH13Q9UKX3 1938 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 MYH15Q9Y2K3 1946 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 VIMP08670 466 aaKnown RBP17.84■□□□□ 0.45
MCF2L-229ENST00000488765 IL2RBP14784 551 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 PAPOLAP51003 745 aaKnown RBP17.84■□□□□ 0.45
MCF2L-229ENST00000488765 TRAF1Q13077 416 aa17.84■□□□□ 0.45
MCF2L-229ENST00000488765 CDC37Q16543 378 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms