RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 TNFRSF10CO14798 259 aa7.28□□□□□ -1.24
BRCA1-217ENST00000487825 FKTNO75072 461 aa7.28□□□□□ -1.24
BRCA1-217ENST00000487825 RECKO95980 971 aa7.28□□□□□ -1.24
BRCA1-217ENST00000487825 CCNFP41002 786 aa7.28□□□□□ -1.24
BRCA1-217ENST00000487825 WAPLQ7Z5K2 1190 aa7.28□□□□□ -1.24
BRCA1-217ENST00000487825 ZNF655Q8N720 491 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-217ENST00000487825 DCP1AQ9NPI6 582 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-217ENST00000487825 ZMYM5Q9UJ78 669 aa7.28□□□□□ -1.24
BRCA1-217ENST00000487825 DDX41Q9UJV9 622 aaKnown RBP7.28□□□□□ -1.24
BRCA1-217ENST00000487825 TCFL5Q9UL49 500 aa7.28□□□□□ -1.24
BRCA1-217ENST00000487825 PPT2Q9UMR5 302 aa7.28□□□□□ -1.24
BRCA1-217ENST00000487825 PTPN23Q9H3S7 1636 aa7.27□□□□□ -1.25
BRCA1-217ENST00000487825 FITM1A5D6W6 292 aa7.27□□□□□ -1.25
BRCA1-217ENST00000487825 SCAMP3O14828 347 aaKnown RBP7.27□□□□□ -1.25
BRCA1-217ENST00000487825 ACRP10323 421 aa7.27□□□□□ -1.25
BRCA1-217ENST00000487825 GALK1P51570 392 aa7.27□□□□□ -1.25
BRCA1-217ENST00000487825 DUSP4Q13115 394 aa7.27□□□□□ -1.25
BRCA1-217ENST00000487825 RNF111Q6ZNA4 994 aa7.27□□□□□ -1.25
BRCA1-217ENST00000487825 FBXL21Q9UKT6 434 aa7.27□□□□□ -1.25
BRCA1-217ENST00000487825 ZNRF3Q9ULT6 936 aa7.27□□□□□ -1.25
BRCA1-217ENST00000487825 DBX1A6NMT0 343 aa7.26□□□□□ -1.25
BRCA1-217ENST00000487825 SIGLEC6O43699 453 aa7.26□□□□□ -1.25
BRCA1-217ENST00000487825 SYPP08247 313 aa7.26□□□□□ -1.25
BRCA1-217ENST00000487825 PCBP3P57721 371 aaKnown RBP7.26□□□□□ -1.25
BRCA1-217ENST00000487825 ZPBP2Q6X784 338 aa7.26□□□□□ -1.25
BRCA1-217ENST00000487825 SPPL2CQ8IUH8 684 aa7.26□□□□□ -1.25
BRCA1-217ENST00000487825 LILRA2Q8N149 483 aa7.26□□□□□ -1.25
BRCA1-217ENST00000487825 FBXO15Q8NCQ5 510 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-217ENST00000487825 LINC01599Q8WXQ3 324 aa7.26□□□□□ -1.25
BRCA1-217ENST00000487825 EPB41L4BQ9H329 900 aa7.26□□□□□ -1.25
BRCA1-217ENST00000487825 CHST7Q9NS84 486 aa7.26□□□□□ -1.25
BRCA1-217ENST00000487825 GFOD1Q9NXC2 390 aa7.26□□□□□ -1.25
BRCA1-217ENST00000487825 GPR160Q9UJ42 338 aa7.26□□□□□ -1.25
BRCA1-217ENST00000487825 TMEM131LA2VDJ0 1609 aa7.26□□□□□ -1.25
BRCA1-217ENST00000487825 DUOX2Q9NRD8 1548 aa7.26□□□□□ -1.25
BRCA1-217ENST00000487825 MYOM2P54296 1465 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 RALGAPBQ86X10 1494 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 MTUS2Q5JR59 1369 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 PIK3R4Q99570 1358 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 PSPNO60542 156 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 IMPDH2P12268 514 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 RAP1GAPP47736 663 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 CHRNEQ04844 493 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 PAK2Q13177 524 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 AUHQ13825 339 aaKnown RBP7.25□□□□□ -1.25
BRCA1-217ENST00000487825 C9orf131Q5VYM1 1079 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 ZNF654Q8IZM8 581 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 ANKS4BQ8N8V4 417 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 G6PC3Q9BUM1 346 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 ZNF281Q9Y2X9 895 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 PCDHB12Q9Y5F1 795 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 LMTK2Q8IWU2 1503 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 CEP162Q5TB80 1403 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 ADAMTS13Q76LX8 1427 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 RREB1Q92766 1687 aa7.25□□□□□ -1.25
BRCA1-217ENST00000487825 TMEM82A0PJX8 343 aa7.24□□□□□ -1.25
BRCA1-217ENST00000487825 C9IYK1 514 aa7.24□□□□□ -1.25
BRCA1-217ENST00000487825 USP2O75604 605 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-217ENST00000487825 VAMP1P23763 118 aa7.24□□□□□ -1.25
BRCA1-217ENST00000487825 IDI1Q13907 227 aa7.24□□□□□ -1.25
BRCA1-217ENST00000487825 NR0B2Q15466 257 aa7.24□□□□□ -1.25
BRCA1-217ENST00000487825 TDRD10Q5VZ19 366 aaKnown RBP7.24□□□□□ -1.25
BRCA1-217ENST00000487825 INTS3Q68E01 1043 aaKnown RBP7.24□□□□□ -1.25
BRCA1-217ENST00000487825 RUFY4Q6ZNE9 571 aa7.24□□□□□ -1.25
BRCA1-217ENST00000487825 SIRT2Q8IXJ6 389 aa7.24□□□□□ -1.25
BRCA1-217ENST00000487825 LINC00116Q8NCU8 138 aa7.24□□□□□ -1.25
BRCA1-217ENST00000487825 MRRFQ96E11 262 aaKnown RBP7.24□□□□□ -1.25
BRCA1-217ENST00000487825 DHRS1Q96LJ7 313 aa7.24□□□□□ -1.25
BRCA1-217ENST00000487825 SUCOQ9UBS9 1254 aaKnown RBP7.24□□□□□ -1.25
BRCA1-217ENST00000487825 CROCC2H7BZ55 1655 aa7.24□□□□□ -1.25
BRCA1-217ENST00000487825 NOS1P29475 1434 aa7.24□□□□□ -1.25
BRCA1-217ENST00000487825 NWD2Q9ULI1 1742 aa7.24□□□□□ -1.25
BRCA1-217ENST00000487825 PLCH1Q4KWH8 1693 aa7.23□□□□□ -1.25
BRCA1-217ENST00000487825 C1QTNF8P60827 252 aa7.23□□□□□ -1.25
BRCA1-217ENST00000487825 BBS9Q3SYG4 887 aa7.23□□□□□ -1.25
BRCA1-217ENST00000487825 CCDC81Q6ZN84 652 aa7.23□□□□□ -1.25
BRCA1-217ENST00000487825 METTL16Q86W50 562 aaKnown RBP7.23□□□□□ -1.25
BRCA1-217ENST00000487825 CCDC144CPQ8IYA2 1237 aa7.23□□□□□ -1.25
BRCA1-217ENST00000487825 PPP1R16BQ96T49 567 aa7.23□□□□□ -1.25
BRCA1-217ENST00000487825 GINM1Q9NU53 330 aa7.23□□□□□ -1.25
BRCA1-217ENST00000487825 FAM86C1Q9NVL1 165 aa7.23□□□□□ -1.25
BRCA1-217ENST00000487825 TBX22Q9Y458 520 aa7.23□□□□□ -1.25
BRCA1-217ENST00000487825 NUP188Q5SRE5 1749 aa7.23□□□□□ -1.25
BRCA1-217ENST00000487825 NRXN3Q9Y4C0 1643 aa7.23□□□□□ -1.25
BRCA1-217ENST00000487825 RIMS2Q9UQ26 1411 aa7.22□□□□□ -1.25
BRCA1-217ENST00000487825 NOTOA8MTQ0 251 aa7.22□□□□□ -1.25
BRCA1-217ENST00000487825 TSPAN15O95858 294 aa7.22□□□□□ -1.25
BRCA1-217ENST00000487825 EFEMP2O95967 443 aa7.22□□□□□ -1.25
BRCA1-217ENST00000487825 TMEM253P0C7T8 217 aa7.22□□□□□ -1.25
BRCA1-217ENST00000487825 C1QTNF9P0C862 333 aa7.22□□□□□ -1.25
BRCA1-217ENST00000487825 SLC14A2Q15849 920 aa7.22□□□□□ -1.25
BRCA1-217ENST00000487825 ZYXQ15942 572 aaKnown RBP7.22□□□□□ -1.25
BRCA1-217ENST00000487825 CEP128Q6ZU80 1094 aa7.22□□□□□ -1.25
BRCA1-217ENST00000487825 ZNF605Q86T29 641 aa7.22□□□□□ -1.25
BRCA1-217ENST00000487825 BHLHE22Q8NFJ8 381 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-217ENST00000487825 DDX17Q92841 729 aaKnown RBP7.22□□□□□ -1.25
BRCA1-217ENST00000487825 MAP6Q96JE9 813 aa7.22□□□□□ -1.25
BRCA1-217ENST00000487825 TM9SF2Q99805 663 aa7.22□□□□□ -1.25
BRCA1-217ENST00000487825 SLC6A17Q9H1V8 727 aa7.22□□□□□ -1.25
BRCA1-217ENST00000487825 CWC22Q9HCG8 908 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms