RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 CDKAL1Q5VV42 579 aa22.93■■□□□ 1.26
HPS3-206ENST00000486530 SLC37A4O43826 429 aa22.92■■□□□ 1.26
HPS3-206ENST00000486530 EDIL3O43854 480 aa22.92■■□□□ 1.26
HPS3-206ENST00000486530 GCFC2P16383 781 aaKnown RBP22.92■■□□□ 1.26
HPS3-206ENST00000486530 PAK1Q13153 545 aa22.92■■□□□ 1.26
HPS3-206ENST00000486530 CCDC112Q8NEF3 446 aa22.92■■□□□ 1.26
HPS3-206ENST00000486530 CALML4Q96GE6 196 aa22.92■■□□□ 1.26
HPS3-206ENST00000486530 PCDHA1Q9Y5I3 950 aa22.92■■□□□ 1.26
HPS3-206ENST00000486530 A0A1B0GTH6 734 aa22.92■■□□□ 1.26
HPS3-206ENST00000486530 TXKP42681 527 aa22.92■■□□□ 1.26
HPS3-206ENST00000486530 TNIP1Q15025 636 aa22.92■■□□□ 1.26
HPS3-206ENST00000486530 TPD52L1Q16890 204 aaPredicted RBP22.92■■□□□ 1.26
HPS3-206ENST00000486530 FKBP1CQ5VVH2 108 aa22.92■■□□□ 1.26
HPS3-206ENST00000486530 CTAGE1Q96RT6 745 aa22.92■■□□□ 1.26
HPS3-206ENST00000486530 PLIN2Q99541 437 aa22.91■■□□□ 1.26
HPS3-206ENST00000486530 MMTAG2Q9BU76 263 aaKnown RBP22.91■■□□□ 1.26
HPS3-206ENST00000486530 CNTNAP1P78357 1384 aa22.91■■□□□ 1.26
HPS3-206ENST00000486530 BMP3P12645 472 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 JAG1P78504 1218 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 RASSF7Q02833 373 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 PDIA5Q14554 519 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 RRP1BQ14684 758 aaKnown RBP22.9■■□□□ 1.26
HPS3-206ENST00000486530 SPECC1LQ69YQ0 1117 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 LRWD1Q9UFC0 647 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 UQCRHLA0A096LP55 91 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 KLRC4O43908 158 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 RHOBTB3O94955 611 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 UQCRHP07919 91 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 NR1I3Q14994 352 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 SYDE2Q5VT97 1194 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 MCTP2Q6DN12 878 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 BTNL9Q6UXG8 535 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 LRRC15Q8TF66 581 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 CCDC47Q96A33 483 aaKnown RBP22.9■■□□□ 1.26
HPS3-206ENST00000486530 C16orf45Q96MC5 204 aaPredicted RBP22.9■■□□□ 1.26
HPS3-206ENST00000486530 AMNQ9BXJ7 453 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 ARHGEF10LQ9HCE6 1279 aa22.9■■□□□ 1.26
HPS3-206ENST00000486530 DDX25Q9UHL0 483 aaKnown RBP22.9■■□□□ 1.26
HPS3-206ENST00000486530 SHTN1A0MZ66 631 aa22.89■■□□□ 1.25
HPS3-206ENST00000486530 AMPD3Q01432 767 aa22.89■■□□□ 1.25
HPS3-206ENST00000486530 TBX2Q13207 712 aaPredicted RBP22.89■■□□□ 1.25
HPS3-206ENST00000486530 AP3B2Q13367 1082 aa22.89■■□□□ 1.25
HPS3-206ENST00000486530 KMT5BQ4FZB7 885 aa22.89■■□□□ 1.25
HPS3-206ENST00000486530 APTXQ7Z2E3 356 aaKnown RBP22.89■■□□□ 1.25
HPS3-206ENST00000486530 CCAR2Q8N163 923 aaKnown RBP22.89■■□□□ 1.25
HPS3-206ENST00000486530 NELFBQ8WX92 580 aa22.89■■□□□ 1.25
HPS3-206ENST00000486530 GTPBP4Q9BZE4 634 aaKnown RBP22.89■■□□□ 1.25
HPS3-206ENST00000486530 STK17AQ9UEE5 414 aa22.89■■□□□ 1.25
HPS3-206ENST00000486530 GDAQ9Y2T3 454 aa22.89■■□□□ 1.25
HPS3-206ENST00000486530 ZNF280AP59817 542 aaPredicted RBP22.88■■□□□ 1.25
HPS3-206ENST00000486530 NUP88Q99567 741 aaPredicted RBP22.88■■□□□ 1.25
HPS3-206ENST00000486530 C7orf25Q9BPX7 421 aa22.88■■□□□ 1.25
HPS3-206ENST00000486530 WNT10BO00744 389 aa22.88■■□□□ 1.25
HPS3-206ENST00000486530 PRCPP42785 496 aa22.88■■□□□ 1.25
HPS3-206ENST00000486530 MMP14P50281 582 aa22.88■■□□□ 1.25
HPS3-206ENST00000486530 SPAG1Q07617 926 aa22.88■■□□□ 1.25
HPS3-206ENST00000486530 IKQ13123 557 aaPredicted RBP22.88■■□□□ 1.25
HPS3-206ENST00000486530 STIM1Q13586 685 aa22.88■■□□□ 1.25
HPS3-206ENST00000486530 FAM83AQ86UY5 434 aa22.88■■□□□ 1.25
HPS3-206ENST00000486530 ADSSL1Q8N142 457 aa22.88■■□□□ 1.25
HPS3-206ENST00000486530 MYRIPQ8NFW9 859 aa22.88■■□□□ 1.25
HPS3-206ENST00000486530 TRIM9Q9C026 710 aa22.88■■□□□ 1.25
HPS3-206ENST00000486530 MYOZ2Q9NPC6 264 aa22.88■■□□□ 1.25
HPS3-206ENST00000486530 A0A1W2PRG0 241 aa22.87■■□□□ 1.25
HPS3-206ENST00000486530 FZD9O00144 591 aa22.87■■□□□ 1.25
HPS3-206ENST00000486530 NBPF9Q3BBW0 867 aa22.87■■□□□ 1.25
HPS3-206ENST00000486530 FILIP1LQ4L180 1135 aa22.87■■□□□ 1.25
HPS3-206ENST00000486530 FBXO11Q86XK2 927 aa22.87■■□□□ 1.25
HPS3-206ENST00000486530 GIMAP8Q8ND71 665 aaPredicted RBP22.87■■□□□ 1.25
HPS3-206ENST00000486530 ANO3Q9BYT9 981 aa22.87■■□□□ 1.25
HPS3-206ENST00000486530 VEZTQ9HBM0 779 aa22.87■■□□□ 1.25
HPS3-206ENST00000486530 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.87■■□□□ 1.25
HPS3-206ENST00000486530 ADD3Q9UEY8 706 aaKnown RBP22.87■■□□□ 1.25
HPS3-206ENST00000486530 USP17L15C9J2P7 530 aa22.86■■□□□ 1.25
HPS3-206ENST00000486530 USP17L13C9JLJ4 530 aa22.86■■□□□ 1.25
HPS3-206ENST00000486530 USP17L11C9JVI0 530 aa22.86■■□□□ 1.25
HPS3-206ENST00000486530 USP17L18D6R9N7 530 aa22.86■■□□□ 1.25
HPS3-206ENST00000486530 USP17L22D6RA61 530 aa22.86■■□□□ 1.25
HPS3-206ENST00000486530 USP17L17D6RBQ6 530 aa22.86■■□□□ 1.25
HPS3-206ENST00000486530 USP17L19D6RCP7 530 aa22.86■■□□□ 1.25
HPS3-206ENST00000486530 USP17L20D6RJB6 530 aa22.86■■□□□ 1.25
HPS3-206ENST00000486530 TBC1D12O60347 775 aa22.86■■□□□ 1.25
HPS3-206ENST00000486530 TNNT1P13805 278 aa22.86■■□□□ 1.25
HPS3-206ENST00000486530 RPS12P25398 132 aaKnown RBP22.86■■□□□ 1.25
HPS3-206ENST00000486530 USP11P51784 963 aa22.86■■□□□ 1.25
HPS3-206ENST00000486530 USP17L24Q0WX57 530 aa22.86■■□□□ 1.25
HPS3-206ENST00000486530 USP17L6PQ6QN14 398 aa22.86■■□□□ 1.25
HPS3-206ENST00000486530 CDK5RAP3Q96JB5 506 aa22.86■■□□□ 1.25
HPS3-206ENST00000486530 TMX1Q9H3N1 280 aa22.86■■□□□ 1.25
HPS3-206ENST00000486530 USP27XA6NNY8 438 aa22.85■■□□□ 1.25
HPS3-206ENST00000486530 GRB10Q13322 594 aa22.85■■□□□ 1.25
HPS3-206ENST00000486530 KRT79Q5XKE5 535 aa22.85■■□□□ 1.25
HPS3-206ENST00000486530 ANKRD20A12PQ8NF67 263 aa22.85■■□□□ 1.25
HPS3-206ENST00000486530 LIMA1Q9UHB6 759 aaKnown RBP22.85■■□□□ 1.25
HPS3-206ENST00000486530 PGAP2Q9UHJ9 254 aa22.85■■□□□ 1.25
HPS3-206ENST00000486530 ZBTB21Q9ULJ3 1066 aa22.85■■□□□ 1.25
HPS3-206ENST00000486530 MOXD1Q6UVY6 613 aa22.85■■□□□ 1.25
HPS3-206ENST00000486530 GOPCQ9HD26 462 aa22.85■■□□□ 1.25
HPS3-206ENST00000486530 EXOC1Q9NV70 894 aa22.85■■□□□ 1.25
HPS3-206ENST00000486530 TMX2Q9Y320 296 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms