RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 WASH4PA8MWX3 477 aa5.73□□□□□ -1.49
PTCD3-214ENST00000483925 FAM153BP0C7A2 387 aa5.73□□□□□ -1.49
PTCD3-214ENST00000483925 NEK2P51955 445 aa5.73□□□□□ -1.49
PTCD3-214ENST00000483925 SETQ01105 290 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-214ENST00000483925 GAB4Q2WGN9 574 aa5.73□□□□□ -1.49
PTCD3-214ENST00000483925 LRRFIP1Q32MZ4 808 aaKnown RBP5.73□□□□□ -1.49
PTCD3-214ENST00000483925 FNDC3BQ53EP0 1204 aaKnown RBP5.73□□□□□ -1.49
PTCD3-214ENST00000483925 C6orf15Q6UXA7 325 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-214ENST00000483925 NECAB2Q7Z6G3 386 aa5.73□□□□□ -1.49
PTCD3-214ENST00000483925 DNAJB8Q8NHS0 232 aa5.73□□□□□ -1.49
PTCD3-214ENST00000483925 JARID2Q92833 1246 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-214ENST00000483925 KIF2CQ99661 725 aa5.73□□□□□ -1.49
PTCD3-214ENST00000483925 EPN3Q9H201 632 aa5.73□□□□□ -1.49
PTCD3-214ENST00000483925 EHMT1Q9H9B1 1298 aa5.73□□□□□ -1.49
PTCD3-214ENST00000483925 GPATCH2Q9NW75 528 aa5.73□□□□□ -1.49
PTCD3-214ENST00000483925 ADAM30Q9UKF2 790 aa5.73□□□□□ -1.49
PTCD3-214ENST00000483925 SMG5Q9UPR3 1016 aaKnown RBP5.73□□□□□ -1.49
PTCD3-214ENST00000483925 PLD2O14939 933 aa5.72□□□□□ -1.49
PTCD3-214ENST00000483925 CILPO75339 1184 aa5.72□□□□□ -1.49
PTCD3-214ENST00000483925 SRFP11831 508 aa5.72□□□□□ -1.49
PTCD3-214ENST00000483925 RAB27AP51159 221 aa5.72□□□□□ -1.49
PTCD3-214ENST00000483925 CLCQ05315 142 aa5.72□□□□□ -1.49
PTCD3-214ENST00000483925 NCAPHQ15003 741 aa5.72□□□□□ -1.49
PTCD3-214ENST00000483925 DDX46Q7L014 1031 aaKnown RBP5.72□□□□□ -1.49
PTCD3-214ENST00000483925 AFAP1L2Q8N4X5 818 aa5.72□□□□□ -1.49
PTCD3-214ENST00000483925 UBR7Q8N806 425 aa5.72□□□□□ -1.49
PTCD3-214ENST00000483925 PDZD8Q8NEN9 1154 aa5.72□□□□□ -1.49
PTCD3-214ENST00000483925 FBXO41Q8TF61 875 aa5.72□□□□□ -1.49
PTCD3-214ENST00000483925 ACSF2Q96CM8 615 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-214ENST00000483925 SLC39A13Q96H72 371 aa5.72□□□□□ -1.49
PTCD3-214ENST00000483925 TM9SF2Q99805 663 aa5.72□□□□□ -1.49
PTCD3-214ENST00000483925 GPR62Q9BZJ7 368 aa5.72□□□□□ -1.49
PTCD3-214ENST00000483925 SFMBT1Q9UHJ3 866 aa5.72□□□□□ -1.49
PTCD3-214ENST00000483925 DUSP13Q9UII6 198 aa5.72□□□□□ -1.49
PTCD3-214ENST00000483925 KCNH3Q9ULD8 1083 aa5.72□□□□□ -1.49
PTCD3-214ENST00000483925 A0A1W2PQH9 124 aa5.71□□□□□ -1.5
PTCD3-214ENST00000483925 GSG1L2A8MUP6 293 aa5.71□□□□□ -1.5
PTCD3-214ENST00000483925 PRRG2O14669 202 aa5.71□□□□□ -1.5
PTCD3-214ENST00000483925 ATE1O95260 518 aa5.71□□□□□ -1.5
PTCD3-214ENST00000483925 TRHRP34981 398 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-214ENST00000483925 RPL6Q02878 288 aaKnown RBP5.71□□□□□ -1.5
PTCD3-214ENST00000483925 EGR3Q06889 387 aa5.71□□□□□ -1.5
PTCD3-214ENST00000483925 LRRC41Q15345 812 aa5.71□□□□□ -1.5
PTCD3-214ENST00000483925 C14orf80Q86SX3 495 aa5.71□□□□□ -1.5
PTCD3-214ENST00000483925 PASD1Q8IV76 773 aa5.71□□□□□ -1.5
PTCD3-214ENST00000483925 LILRA2Q8N149 483 aa5.71□□□□□ -1.5
PTCD3-214ENST00000483925 NME8Q8N427 588 aa5.71□□□□□ -1.5
PTCD3-214ENST00000483925 OXR1Q8N573 874 aa5.71□□□□□ -1.5
PTCD3-214ENST00000483925 TTC8Q8TAM2 541 aa5.71□□□□□ -1.5
PTCD3-214ENST00000483925 PPM1EQ8WY54 764 aa5.71□□□□□ -1.5
PTCD3-214ENST00000483925 IPO9Q96P70 1041 aaKnown RBP5.71□□□□□ -1.5
PTCD3-214ENST00000483925 KRTAP4-11Q9BYQ6 195 aa5.71□□□□□ -1.5
PTCD3-214ENST00000483925 RNF32Q9H0A6 362 aa5.71□□□□□ -1.5
PTCD3-214ENST00000483925 INTS7Q9NVH2 962 aaKnown RBP5.71□□□□□ -1.5
PTCD3-214ENST00000483925 ZIM2Q9NZV7 527 aa5.71□□□□□ -1.5
PTCD3-214ENST00000483925 LAS1LQ9Y4W2 734 aaKnown RBP5.71□□□□□ -1.5
PTCD3-214ENST00000483925 B2RBV5 119 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 B8ZZF3 427 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 AKAP10O43572 662 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 NUAK1O60285 661 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 FOSP01100 380 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-214ENST00000483925 ZGLP1P0C6A0 271 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 GUCY2CP25092 1073 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 LINC00310P59036 64 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 CLEC4GQ6UXB4 293 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 TSPYL5Q86VY4 417 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-214ENST00000483925 AHI1Q8N157 1196 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 DTWD2Q8NBA8 298 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 SVIPQ8NHG7 77 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 PPP1R13LQ8WUF5 828 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 SYTL4Q96C24 671 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-214ENST00000483925 CAMKK2Q96RR4 588 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 ASPSCR1Q9BZE9 553 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 C19orf44Q9H6X5 657 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 SP110Q9HB58 689 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 PCDHB14Q9Y5E9 798 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 NCANO14594 1321 aa5.7□□□□□ -1.5
PTCD3-214ENST00000483925 FITM1A5D6W6 292 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 AGRPO00253 132 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 ADCY3O60266 1144 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 KATNA1O75449 491 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 INHBBP09529 407 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 POU5F1BQ06416 359 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 PIN1Q13526 163 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-214ENST00000483925 GFOD2Q3B7J2 385 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 RNF219Q5W0B1 726 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-214ENST00000483925 NXNQ6DKJ4 435 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 MRM1Q6IN84 353 aaKnown RBP5.69□□□□□ -1.5
PTCD3-214ENST00000483925 SLC4A10Q6U841 1118 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 KSR2Q6VAB6 950 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 IRF2BP1Q8IU81 584 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 TCEAL8Q8IYN2 117 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 PPM1KQ8N3J5 372 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 CYB5D2Q8WUJ1 264 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 ARPC5LQ9BPX5 153 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 SENP7Q9BQF6 1050 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 CDH19Q9H159 772 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 SLC6A17Q9H1V8 727 aa5.69□□□□□ -1.5
PTCD3-214ENST00000483925 NCOA5Q9HCD5 579 aaKnown RBP5.69□□□□□ -1.5
PTCD3-214ENST00000483925 AASDHPPTQ9NRN7 309 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms