RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 RLFQ13129 1914 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 PHF20L1A8MW92 1017 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 PIK3CDO00329 1044 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 MSNP26038 577 aaKnown RBP10.55□□□□□ -0.72
SMC1A-205ENST00000469129 USP11P51784 963 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 MYL5Q02045 173 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 MORC3Q14149 939 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 UBE2SQ16763 222 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 RRAGBQ5VZM2 374 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 USP49Q70CQ1 688 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 CABP7Q86V35 215 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 ZSCAN30Q86W11 494 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 POTEDQ86YR6 584 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 CDAN1Q8IWY9 1227 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 SPICE1Q8N0Z3 855 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 SPATA20Q8TB22 786 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 ACER1Q8TDN7 264 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 ERCC4Q92889 916 aaPredicted RBP10.55□□□□□ -0.72
SMC1A-205ENST00000469129 CCDC47Q96A33 483 aaKnown RBP10.55□□□□□ -0.72
SMC1A-205ENST00000469129 MRFAP1L1Q96HT8 127 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 KIAA1683Q9H0B3 1180 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 TMEM60Q9H2L4 133 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 DDX25Q9UHL0 483 aaKnown RBP10.55□□□□□ -0.72
SMC1A-205ENST00000469129 MAN1B1Q9UKM7 699 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 STK24Q9Y6E0 443 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 KDM3AQ9Y4C1 1321 aa10.55□□□□□ -0.72
SMC1A-205ENST00000469129 A0A087X0B3 334 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 ESPNB1AK53 854 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 MARCH6O60337 910 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 EGFRP00533 1210 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 PRR29P0C7W0 189 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 FDX1P10109 184 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 HOXA7P31268 230 aaPredicted RBP10.54□□□□□ -0.72
SMC1A-205ENST00000469129 SARSP49591 514 aaKnown RBP10.54□□□□□ -0.72
SMC1A-205ENST00000469129 ZNF75DP51815 510 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 DPYDQ12882 1025 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 PDIA5Q14554 519 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 DHX8Q14562 1220 aaKnown RBP10.54□□□□□ -0.72
SMC1A-205ENST00000469129 IL17AQ16552 155 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 USH1GQ495M9 461 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 ANGEL2Q5VTE6 544 aaKnown RBP10.54□□□□□ -0.72
SMC1A-205ENST00000469129 PDXDC2PQ6P474 469 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 PLA2G4DQ86XP0 818 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 SLFN12Q8IYM2 578 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 SCYL3Q8IZE3 742 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 IGSF22Q8N9C0 903 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 PAGE5Q96GU1 130 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 CDK5RAP3Q96JB5 506 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 PICK1Q9NRD5 415 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 GGA3Q9NZ52 723 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 STK17AQ9UEE5 414 aa10.54□□□□□ -0.72
SMC1A-205ENST00000469129 MRPL11Q9Y3B7 192 aaKnown RBP10.54□□□□□ -0.72
SMC1A-205ENST00000469129 TBX3O15119 743 aa10.53□□□□□ -0.72
SMC1A-205ENST00000469129 FOXN1O15353 648 aa10.53□□□□□ -0.72
SMC1A-205ENST00000469129 CBFA2T2O43439 604 aa10.53□□□□□ -0.72
SMC1A-205ENST00000469129 TDP2O95551 362 aa10.53□□□□□ -0.72
SMC1A-205ENST00000469129 ERCC5P28715 1186 aaPredicted RBP10.53□□□□□ -0.72
SMC1A-205ENST00000469129 SREBF1P36956 1147 aa10.53□□□□□ -0.72
SMC1A-205ENST00000469129 AFMP43652 599 aa10.53□□□□□ -0.72
SMC1A-205ENST00000469129 AMPD3Q01432 767 aa10.53□□□□□ -0.72
SMC1A-205ENST00000469129 KARSQ15046 597 aaKnown RBP10.53□□□□□ -0.72
SMC1A-205ENST00000469129 ZYXQ15942 572 aaKnown RBP10.53□□□□□ -0.72
SMC1A-205ENST00000469129 SUPT20HL1Q3ZLR7 823 aa10.53□□□□□ -0.72
SMC1A-205ENST00000469129 KIFC2Q96AC6 838 aa10.53□□□□□ -0.72
SMC1A-205ENST00000469129 MTMR9Q96QG7 549 aa10.53□□□□□ -0.72
SMC1A-205ENST00000469129 SLF1Q9BQI6 1058 aa10.53□□□□□ -0.72
SMC1A-205ENST00000469129 WDR18Q9BV38 432 aa10.53□□□□□ -0.72
SMC1A-205ENST00000469129 LRRC27Q9C0I9 530 aa10.53□□□□□ -0.72
SMC1A-205ENST00000469129 LRWD1Q9UFC0 647 aa10.53□□□□□ -0.72
SMC1A-205ENST00000469129 ZNF112Q9UJU3 913 aa10.53□□□□□ -0.72
SMC1A-205ENST00000469129 RABGAP1Q9Y3P9 1069 aa10.53□□□□□ -0.72
SMC1A-205ENST00000469129 SSC5DA1L4H1 1573 aa10.52□□□□□ -0.72
SMC1A-205ENST00000469129 CYP3A7-CYP3A51PA0A087WV96 503 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 GCOM1H8Y6P7 765 aaPredicted RBP10.52□□□□□ -0.73
SMC1A-205ENST00000469129 MEIS2O14770 477 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 SLC37A4O43826 429 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 ICAM1P05362 532 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 POLR2MP0CAP2 368 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 CYP3A7P24462 503 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 PPP1R2P41236 205 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 TXKP42681 527 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 ARHGAP4P98171 946 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 NOL9Q5SY16 702 aaKnown RBP10.52□□□□□ -0.73
SMC1A-205ENST00000469129 NBPF12Q5TAG4 269 aaPredicted RBP10.52□□□□□ -0.73
SMC1A-205ENST00000469129 KRT79Q5XKE5 535 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 DRC7Q8IY82 874 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 GRAMD1CQ8IYS0 662 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 SAMD3Q8N6K7 520 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 PRPF38AQ8NAV1 312 aaKnown RBP10.52□□□□□ -0.73
SMC1A-205ENST00000469129 TRPM4Q8TD43 1214 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 MBOAT7Q96N66 472 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 WRNIP1Q96S55 665 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 NT5C3AQ9H0P0 336 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 NMRK2Q9NPI5 230 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 ADARB2Q9NS39 739 aaKnown RBP10.52□□□□□ -0.73
SMC1A-205ENST00000469129 ZKSCAN5Q9Y2L8 839 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 CTDP1Q9Y5B0 961 aaPredicted RBP10.52□□□□□ -0.73
SMC1A-205ENST00000469129 ASTN2O75129 1339 aaPredicted RBP10.52□□□□□ -0.73
SMC1A-205ENST00000469129 SYNRGQ9UMZ2 1314 aa10.52□□□□□ -0.73
SMC1A-205ENST00000469129 A0A087WWV3 80 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms