RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 TCP11L1Q9NUJ3 509 aa16.1■□□□□ 0.17
SCAMP4-206ENST00000460767 MTCH2Q9Y6C9 303 aa16.1■□□□□ 0.17
SCAMP4-206ENST00000460767 GRIN2DO15399 1336 aa16.1■□□□□ 0.17
SCAMP4-206ENST00000460767 CHD7Q9P2D1 2997 aa16.1■□□□□ 0.17
SCAMP4-206ENST00000460767 B4GALT4O60513 344 aa16.09■□□□□ 0.17
SCAMP4-206ENST00000460767 NEFLP07196 543 aa16.09■□□□□ 0.17
SCAMP4-206ENST00000460767 ATP2A2P16615 1042 aaKnown RBP16.09■□□□□ 0.17
SCAMP4-206ENST00000460767 TFAP4Q01664 338 aa16.09■□□□□ 0.17
SCAMP4-206ENST00000460767 TNFAIP2Q03169 654 aa16.09■□□□□ 0.17
SCAMP4-206ENST00000460767 PTH1RQ03431 593 aa16.09■□□□□ 0.17
SCAMP4-206ENST00000460767 CXCL17Q6UXB2 119 aa16.09■□□□□ 0.17
SCAMP4-206ENST00000460767 TLK2Q86UE8 772 aa16.09■□□□□ 0.17
SCAMP4-206ENST00000460767 STK11IPQ8N1F8 1099 aa16.09■□□□□ 0.17
SCAMP4-206ENST00000460767 GMCL1P1Q8NEA9 526 aa16.09■□□□□ 0.17
SCAMP4-206ENST00000460767 AGBL1Q96MI9 1066 aa16.09■□□□□ 0.17
SCAMP4-206ENST00000460767 NUP88Q99567 741 aaPredicted RBP16.09■□□□□ 0.17
SCAMP4-206ENST00000460767 PPP4R2Q9NY27 417 aa16.09■□□□□ 0.17
SCAMP4-206ENST00000460767 FEM1BQ9UK73 627 aa16.09■□□□□ 0.17
SCAMP4-206ENST00000460767 ASB14A6NK59 587 aa16.08■□□□□ 0.16
SCAMP4-206ENST00000460767 GTPBP6O43824 516 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-206ENST00000460767 ZEB2O60315 1214 aa16.08■□□□□ 0.16
SCAMP4-206ENST00000460767 GPR37L1O60883 481 aa16.08■□□□□ 0.16
SCAMP4-206ENST00000460767 TTLL1O95922 423 aa16.08■□□□□ 0.16
SCAMP4-206ENST00000460767 RABGGTBP53611 331 aa16.08■□□□□ 0.16
SCAMP4-206ENST00000460767 BEX3Q00994 111 aa16.08■□□□□ 0.16
SCAMP4-206ENST00000460767 FSCN1Q16658 493 aaKnown RBP16.08■□□□□ 0.16
SCAMP4-206ENST00000460767 TMEM31Q5JXX7 168 aa16.08■□□□□ 0.16
SCAMP4-206ENST00000460767 MAP4K1Q92918 833 aa16.08■□□□□ 0.16
SCAMP4-206ENST00000460767 SLC9A7Q96T83 725 aa16.08■□□□□ 0.16
SCAMP4-206ENST00000460767 NEDD4P46934 1319 aa16.08■□□□□ 0.16
SCAMP4-206ENST00000460767 COL4A4P53420 1690 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-206ENST00000460767 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.07■□□□□ 0.16
SCAMP4-206ENST00000460767 TLL1O43897 1013 aa16.07■□□□□ 0.16
SCAMP4-206ENST00000460767 TSPY3P0CV98 308 aa16.07■□□□□ 0.16
SCAMP4-206ENST00000460767 TSPY8P0CW00 308 aa16.07■□□□□ 0.16
SCAMP4-206ENST00000460767 CCL23P55773 120 aa16.07■□□□□ 0.16
SCAMP4-206ENST00000460767 HAND2P61296 217 aa16.07■□□□□ 0.16
SCAMP4-206ENST00000460767 TMEM67Q5HYA8 995 aa16.07■□□□□ 0.16
SCAMP4-206ENST00000460767 RCSD1Q6JBY9 416 aa16.07■□□□□ 0.16
SCAMP4-206ENST00000460767 CPXCR1Q8N123 301 aa16.07■□□□□ 0.16
SCAMP4-206ENST00000460767 PHOSPHO2Q8TCD6 241 aa16.07■□□□□ 0.16
SCAMP4-206ENST00000460767 RUFY2Q8WXA3 655 aa16.07■□□□□ 0.16
SCAMP4-206ENST00000460767 ACAD9Q9H845 621 aa16.07■□□□□ 0.16
SCAMP4-206ENST00000460767 RAVER2Q9HCJ3 691 aaKnown RBP16.07■□□□□ 0.16
SCAMP4-206ENST00000460767 LCTP09848 1927 aa16.06■□□□□ 0.16
SCAMP4-206ENST00000460767 RAD21O60216 631 aa16.06■□□□□ 0.16
SCAMP4-206ENST00000460767 NMT2O60551 498 aa16.06■□□□□ 0.16
SCAMP4-206ENST00000460767 CA3P07451 260 aa16.06■□□□□ 0.16
SCAMP4-206ENST00000460767 MYOGP15173 224 aa16.06■□□□□ 0.16
SCAMP4-206ENST00000460767 RFC2P35250 354 aa16.06■□□□□ 0.16
SCAMP4-206ENST00000460767 TKFCQ3LXA3 575 aa16.06■□□□□ 0.16
SCAMP4-206ENST00000460767 ESYT1Q9BSJ8 1104 aa16.06■□□□□ 0.16
SCAMP4-206ENST00000460767 LSG1Q9H089 658 aaKnown RBP16.06■□□□□ 0.16
SCAMP4-206ENST00000460767 ALDH8A1Q9H2A2 487 aaPredicted RBP16.06■□□□□ 0.16
SCAMP4-206ENST00000460767 EPHX3Q9H6B9 360 aa16.06■□□□□ 0.16
SCAMP4-206ENST00000460767 A1CFQ9NQ94 594 aaKnown RBP16.06■□□□□ 0.16
SCAMP4-206ENST00000460767 CTDP1Q9Y5B0 961 aaPredicted RBP16.06■□□□□ 0.16
SCAMP4-206ENST00000460767 PRRC2BQ5JSZ5 2229 aaKnown RBP16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 ZNF213O14771 459 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 CYP21A2P08686 494 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 SUPT20HL2P0C7V6 817 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 SMPD1P17405 629 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 CNTN2Q02246 1040 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 IQSEC1Q6DN90 963 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 MFSD6Q6ZSS7 791 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 MICALL1Q8N3F8 863 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 MORC4Q8TE76 937 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 ANKS1AQ92625 1134 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 KIFC2Q96AC6 838 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 AP5M1Q9H0R1 490 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 TRPV6Q9H1D0 765 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 RNF41Q9H4P4 317 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 C11orf16Q9NQ32 467 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 CLIP2Q9UDT6 1046 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 CTNNA3Q9UI47 895 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 TAF6LQ9Y6J9 622 aa16.05■□□□□ 0.16
SCAMP4-206ENST00000460767 SCN10AQ9Y5Y9 1956 aa16.04■□□□□ 0.16
SCAMP4-206ENST00000460767 LOC102724159A0A0B4J2E5 919 aa16.04■□□□□ 0.16
SCAMP4-206ENST00000460767 SOWAHBA6NEL2 793 aa16.04■□□□□ 0.16
SCAMP4-206ENST00000460767 ZBBXA8MT70 800 aa16.04■□□□□ 0.16
SCAMP4-206ENST00000460767 PWP2Q15269 919 aaKnown RBP16.04■□□□□ 0.16
SCAMP4-206ENST00000460767 GMCL1Q96IK5 515 aa16.04■□□□□ 0.16
SCAMP4-206ENST00000460767 VTA1Q9NP79 307 aa16.04■□□□□ 0.16
SCAMP4-206ENST00000460767 ZNF536O15090 1300 aa16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 SCN5AQ14524 2016 aa16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 EPOPA6NHQ4 379 aa16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 TSPY2A6NKD2 308 aa16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 PITPNM1O00562 1244 aa16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 RANBP6O60518 1105 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 PLA2G6O60733 806 aa16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 SNHG28P0DPA3 235 aa16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 ACTN1P12814 892 aa16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 TTLL4Q14679 1199 aa16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 SKIV2LQ15477 1246 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 IMMTQ16891 758 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 PPP4R3BQ5MIZ7 849 aa16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 TAPT1Q6NXT6 567 aa16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 LRRC47Q8N1G4 583 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 HLA-CQ95604 372 aa16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 SCLYQ96I15 445 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms