RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 MPRIPQ6WCQ1 1025 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 WAPLQ7Z5K2 1190 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 LCA5Q86VQ0 697 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 JDP2Q8WYK2 163 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 TRMT1Q9NXH9 659 aaKnown RBP5.67□□□□□ -1.5
CSMD3-204ENST00000455883 TMOD3Q9NYL9 352 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 UBN2Q6ZU65 1347 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 XPO1O14980 1071 aaKnown RBP5.67□□□□□ -1.5
CSMD3-204ENST00000455883 STRNO43815 780 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 RIBC1Q8N443 379 aaPredicted RBP5.67□□□□□ -1.5
CSMD3-204ENST00000455883 RIN3Q8TB24 985 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 LRRC8CQ8TDW0 803 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 KRT12Q99456 494 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.67□□□□□ -1.5
CSMD3-204ENST00000455883 SDK1Q7Z5N4 2213 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 SARM1Q6SZW1 724 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 KSR2Q6VAB6 950 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 ZC3H18Q86VM9 953 aaKnown RBP5.67□□□□□ -1.5
CSMD3-204ENST00000455883 MICU3Q86XE3 530 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 AOPEPQ8N6M6 819 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 ENOX1Q8TC92 643 aaKnown RBP5.67□□□□□ -1.5
CSMD3-204ENST00000455883 FAM192AQ9GZU8 254 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 GPBP1L1Q9HC44 474 aaPredicted RBP5.67□□□□□ -1.5
CSMD3-204ENST00000455883 ASCC3Q8N3C0 2202 aaKnown RBP5.67□□□□□ -1.5
CSMD3-204ENST00000455883 SDSP20132 328 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 ANO5Q75V66 913 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 TTC13Q8NBP0 860 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 BCAS4Q8TDM0 211 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 NOC4LQ9BVI4 516 aaKnown RBP5.67□□□□□ -1.5
CSMD3-204ENST00000455883 NDEL1Q9GZM8 345 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 NACA2Q9H009 215 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 AP2B1P63010 937 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 ATP8B2P98198 1209 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 CRYMQ14894 314 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 PARP10Q53GL7 1025 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 KRT80Q6KB66 452 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 CEP85Q6P2H3 762 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 ATL2Q8NHH9 583 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 TDRD7Q8NHU6 1098 aaKnown RBP5.67□□□□□ -1.5
CSMD3-204ENST00000455883 ASIC3Q9UHC3 531 aa5.67□□□□□ -1.5
CSMD3-204ENST00000455883 ATXN2Q99700 1313 aaKnown RBP5.66□□□□□ -1.5
CSMD3-204ENST00000455883 HADHQ16836 314 aaKnown RBP5.66□□□□□ -1.5
CSMD3-204ENST00000455883 GTF3C6Q969F1 213 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 TADA1Q96BN2 335 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 KCNK9Q9NPC2 374 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 ARL2BPQ9Y2Y0 163 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 CAPN7Q9Y6W3 813 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 SCN9AQ15858 1988 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 MROH2AA6NES4 1674 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 OPHN1O60890 802 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 CLTAP09496 248 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 CADPS2Q86UW7 1296 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 CDHR1Q96JP9 859 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 UNC13BO14795 1591 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 SESN3P58005 492 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 SNX29Q8TEQ0 813 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 FMO2Q99518 471 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 TBC1D7Q9P0N9 293 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 PSMA8Q8TAA3 256 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 RHPN1Q8TCX5 695 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 BRF1Q92994 677 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 OLFM1Q99784 485 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 PRDM11Q9NQV5 511 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 PAG1Q9NWQ8 432 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 KIF13AQ9H1H9 1805 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 TYW5A2RUC4 315 aaKnown RBP5.66□□□□□ -1.5
CSMD3-204ENST00000455883 H0Y626 953 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 TMCC1O94876 653 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 TRIM16O95361 564 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 CHEK2O96017 543 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 TUBA4AP68366 448 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 CAPRIN2Q6IMN6 1127 aaKnown RBP5.66□□□□□ -1.5
CSMD3-204ENST00000455883 CSGALNACT2Q8N6G5 542 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 NEURL4Q96JN8 1562 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 HECW2Q9P2P5 1572 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 ABLIM1O14639 778 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 XPOTO43592 962 aaKnown RBP5.66□□□□□ -1.5
CSMD3-204ENST00000455883 ZNF202O95125 648 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 GAP43P17677 238 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 TNNI2P48788 182 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 ASIC2Q16515 512 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 SLC38A10Q9HBR0 1119 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 IFNKQ9P0W0 207 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 LMO7Q8WWI1 1683 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 IQANK1A0A1B0GTG1 560 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 KRT38O76015 456 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 EEF2P13639 858 aaKnown RBP5.66□□□□□ -1.5
CSMD3-204ENST00000455883 GRAMD4Q6IC98 578 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 PRAM1Q96QH2 718 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 FNBP1Q96RU3 617 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 PTPRKQ15262 1439 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 POTEMA6NI47 508 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 CMA1P23946 247 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 LMOD1P29536 600 aaPredicted RBP5.66□□□□□ -1.5
CSMD3-204ENST00000455883 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.66□□□□□ -1.5
CSMD3-204ENST00000455883 ATAD3BQ5T9A4 648 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 POTEHQ6S545 545 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 POTEGQ6S5H5 508 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 HORMAD1Q86X24 394 aa5.66□□□□□ -1.5
CSMD3-204ENST00000455883 RANBP6O60518 1105 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms