RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 CNTN2Q02246 1040 aa12.52□□□□□ -0.41
HDAC6-211ENST00000443563 SLC35G1Q2M3R5 365 aa12.52□□□□□ -0.41
HDAC6-211ENST00000443563 CPLX2Q6PUV4 134 aaKnown RBP12.52□□□□□ -0.41
HDAC6-211ENST00000443563 CCDC82Q8N4S0 544 aa12.52□□□□□ -0.41
HDAC6-211ENST00000443563 ZNF713Q8N859 430 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-211ENST00000443563 IL27Q8NEV9 243 aa12.52□□□□□ -0.41
HDAC6-211ENST00000443563 PIBF1Q8WXW3 757 aa12.52□□□□□ -0.41
HDAC6-211ENST00000443563 C22orf23Q9BZE7 217 aa12.52□□□□□ -0.41
HDAC6-211ENST00000443563 ABHD16BQ9H3Z7 469 aa12.52□□□□□ -0.41
HDAC6-211ENST00000443563 TNRC18O15417 2968 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-211ENST00000443563 FRMPD3Q5JV73 1810 aa12.51□□□□□ -0.41
HDAC6-211ENST00000443563 POTEFA5A3E0 1075 aa12.51□□□□□ -0.41
HDAC6-211ENST00000443563 SOWAHBA6NEL2 793 aa12.51□□□□□ -0.41
HDAC6-211ENST00000443563 SEPT4O43236 478 aa12.51□□□□□ -0.41
HDAC6-211ENST00000443563 PPP1R11O60927 126 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-211ENST00000443563 CFBP00751 764 aa12.51□□□□□ -0.41
HDAC6-211ENST00000443563 TFRCP02786 760 aaKnown RBP12.51□□□□□ -0.41
HDAC6-211ENST00000443563 TAL1P17542 331 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-211ENST00000443563 PDIA3P30101 505 aaKnown RBP12.51□□□□□ -0.41
HDAC6-211ENST00000443563 ADD1P35611 737 aaKnown RBP12.51□□□□□ -0.41
HDAC6-211ENST00000443563 RBM25P49756 843 aaKnown RBP12.51□□□□□ -0.41
HDAC6-211ENST00000443563 NEK4P51957 841 aa12.51□□□□□ -0.41
HDAC6-211ENST00000443563 AKAP17AQ02040 695 aaKnown RBP12.51□□□□□ -0.41
HDAC6-211ENST00000443563 GHRHRQ02643 423 aa12.51□□□□□ -0.41
HDAC6-211ENST00000443563 SLC30A10Q6XR72 485 aa12.51□□□□□ -0.41
HDAC6-211ENST00000443563 CMTR1Q8N1G2 835 aaKnown RBP12.51□□□□□ -0.41
HDAC6-211ENST00000443563 U2AF1L4Q8WU68 220 aaKnown RBP12.51□□□□□ -0.41
HDAC6-211ENST00000443563 DEFB118Q96PH6 123 aa12.51□□□□□ -0.41
HDAC6-211ENST00000443563 CNTNAP5Q8WYK1 1306 aa12.51□□□□□ -0.41
HDAC6-211ENST00000443563 MCM3APO60318 1980 aa12.5□□□□□ -0.41
HDAC6-211ENST00000443563 GCOM1H8Y6P7 765 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-211ENST00000443563 POLR2MP0CAP2 368 aa12.5□□□□□ -0.41
HDAC6-211ENST00000443563 CDC27P30260 824 aa12.5□□□□□ -0.41
HDAC6-211ENST00000443563 CCND3P30281 292 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-211ENST00000443563 RGS19P49795 217 aa12.5□□□□□ -0.41
HDAC6-211ENST00000443563 ALDH5A1P51649 535 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-211ENST00000443563 HSD17B4P51659 736 aa12.5□□□□□ -0.41
HDAC6-211ENST00000443563 ARMCX2Q7L311 632 aa12.5□□□□□ -0.41
HDAC6-211ENST00000443563 TEX2Q8IWB9 1127 aa12.5□□□□□ -0.41
HDAC6-211ENST00000443563 ANKLE1Q8NAG6 615 aa12.5□□□□□ -0.41
HDAC6-211ENST00000443563 CUL5Q93034 780 aa12.5□□□□□ -0.41
HDAC6-211ENST00000443563 FGD4Q96M96 766 aa12.5□□□□□ -0.41
HDAC6-211ENST00000443563 FAM217BQ9NTX9 383 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-211ENST00000443563 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-211ENST00000443563 DDX20Q9UHI6 824 aaKnown RBP12.5□□□□□ -0.41
HDAC6-211ENST00000443563 DNAH12Q6ZR08 3092 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 LRRC37A2A6NM11 1700 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 CPLX1O14810 134 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 CDKL5O76039 1030 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 SNAI1O95863 264 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-211ENST00000443563 AKR1A1P14550 325 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 IFNAR1P17181 557 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 EN2P19622 333 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-211ENST00000443563 AK2P54819 239 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 CCT2P78371 535 aaKnown RBP12.49□□□□□ -0.41
HDAC6-211ENST00000443563 PDE4DQ08499 809 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 FUT2Q10981 343 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 ACVR2BQ13705 512 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 PPP1R18Q6NYC8 613 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 HEATR3Q7Z4Q2 680 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 TRIM22Q8IYM9 498 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 TRPV1Q8NER1 839 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 SYTL5Q8TDW5 730 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-211ENST00000443563 MORC4Q8TE76 937 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 NSUN6Q8TEA1 469 aaKnown RBP12.49□□□□□ -0.41
HDAC6-211ENST00000443563 IWS1Q96ST2 819 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 RNF26Q9BY78 433 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-211ENST00000443563 CRISPLD2Q9H0B8 497 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 GLT8D2Q9H1C3 349 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 VTA1Q9NP79 307 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 ZHX1Q9UKY1 873 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-211ENST00000443563 FAM184BQ9ULE4 1060 aa12.49□□□□□ -0.41
HDAC6-211ENST00000443563 V9GY48 417 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-211ENST00000443563 PRPF3O43395 683 aaKnown RBP12.48□□□□□ -0.41
HDAC6-211ENST00000443563 ZNF865P0CJ78 1059 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-211ENST00000443563 RARBP10826 455 aa12.48□□□□□ -0.41
HDAC6-211ENST00000443563 PRAMEF19Q5SWL8 479 aa12.48□□□□□ -0.41
HDAC6-211ENST00000443563 ARHGEF16Q5VV41 709 aa12.48□□□□□ -0.41
HDAC6-211ENST00000443563 LHX8Q68G74 356 aa12.48□□□□□ -0.41
HDAC6-211ENST00000443563 CCDC12Q8WUD4 166 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-211ENST00000443563 TBC1D5Q92609 795 aa12.48□□□□□ -0.41
HDAC6-211ENST00000443563 RMDN3Q96TC7 470 aa12.48□□□□□ -0.41
HDAC6-211ENST00000443563 SLKQ9H2G2 1235 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-211ENST00000443563 OGDHLQ9ULD0 1010 aa12.48□□□□□ -0.41
HDAC6-211ENST00000443563 ASTN1O14525 1302 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 hCG_1642624A0A1W2PR95 340 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 PIK3CDO00329 1044 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 OPLAHO14841 1288 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 PFKFB2O60825 505 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 SCG2P13521 617 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 EDNRBP24530 442 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 NAPAP54920 295 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 SSRP1Q08945 709 aaKnown RBP12.47□□□□□ -0.41
HDAC6-211ENST00000443563 STK3Q13188 491 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 RABEP1Q15276 862 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 STXBP2Q15833 593 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 PFKFB3Q16875 520 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-211ENST00000443563 ARRDC4Q8NCT1 418 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 SMARCC2Q8TAQ2 1214 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 PURBQ96QR8 312 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms