RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 TAAR1Q96RJ0 339 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 SPZ1Q9BXG8 430 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 ABHD16BQ9H3Z7 469 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 ZHX1Q9UKY1 873 aaPredicted RBP15.42■□□□□ 0.06
LINC00399-201ENST00000439008 CNPY2Q9Y2B0 182 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 SLC12A7Q9Y666 1083 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 PNMA6FA0A0J9YX94 578 aa15.41■□□□□ 0.06
LINC00399-201ENST00000439008 EPB41L2O43491 1005 aaKnown RBP15.41■□□□□ 0.06
LINC00399-201ENST00000439008 MSCO60682 206 aa15.41■□□□□ 0.06
LINC00399-201ENST00000439008 ADAMTS4O75173 837 aa15.41■□□□□ 0.06
LINC00399-201ENST00000439008 RPS6KB1P23443 525 aa15.41■□□□□ 0.06
LINC00399-201ENST00000439008 CDC27P30260 824 aa15.41■□□□□ 0.06
LINC00399-201ENST00000439008 APOBRQ0VD83 1088 aa15.41■□□□□ 0.06
LINC00399-201ENST00000439008 TMTC3Q6ZXV5 915 aa15.41■□□□□ 0.06
LINC00399-201ENST00000439008 NECAB2Q7Z6G3 386 aa15.41■□□□□ 0.06
LINC00399-201ENST00000439008 FBXO16Q8IX29 292 aaPredicted RBP15.41■□□□□ 0.06
LINC00399-201ENST00000439008 CCDC82Q8N4S0 544 aa15.41■□□□□ 0.06
LINC00399-201ENST00000439008 CTCFLQ8NI51 663 aaPredicted RBP15.41■□□□□ 0.06
LINC00399-201ENST00000439008 AMNQ9BXJ7 453 aa15.41■□□□□ 0.06
LINC00399-201ENST00000439008 AGXT2Q9BYV1 514 aa15.41■□□□□ 0.06
LINC00399-201ENST00000439008 PCDHA1Q9Y5I3 950 aa15.41■□□□□ 0.06
LINC00399-201ENST00000439008 KLF18A0A0U1RQI7 1052 aa15.4■□□□□ 0.06
LINC00399-201ENST00000439008 ASB14A6NK59 587 aa15.4■□□□□ 0.06
LINC00399-201ENST00000439008 CTAGE5O15320 804 aa15.4■□□□□ 0.06
LINC00399-201ENST00000439008 AKR1A1P14550 325 aa15.4■□□□□ 0.06
LINC00399-201ENST00000439008 CAPN2P17655 700 aa15.4■□□□□ 0.06
LINC00399-201ENST00000439008 CASTP20810 708 aaKnown RBP15.4■□□□□ 0.06
LINC00399-201ENST00000439008 EDNRBP24530 442 aa15.4■□□□□ 0.06
LINC00399-201ENST00000439008 ADCYAP1R1P41586 468 aa15.4■□□□□ 0.06
LINC00399-201ENST00000439008 HSD17B4P51659 736 aa15.4■□□□□ 0.06
LINC00399-201ENST00000439008 GHRHRQ02643 423 aa15.4■□□□□ 0.06
LINC00399-201ENST00000439008 BLOC1S2Q6QNY1 142 aa15.4■□□□□ 0.06
LINC00399-201ENST00000439008 BRF1Q92994 677 aa15.4■□□□□ 0.06
LINC00399-201ENST00000439008 C11orf49Q9H6J7 331 aa15.4■□□□□ 0.06
LINC00399-201ENST00000439008 ZSWIM6Q9HCJ5 1215 aa15.4■□□□□ 0.06
LINC00399-201ENST00000439008 PNMA2Q9UL42 364 aa15.4■□□□□ 0.06
LINC00399-201ENST00000439008 MRPL11Q9Y3B7 192 aaKnown RBP15.4■□□□□ 0.06
LINC00399-201ENST00000439008 SYNRGQ9UMZ2 1314 aa15.4■□□□□ 0.06
LINC00399-201ENST00000439008 HMGB1P09429 215 aaKnown RBP15.39■□□□□ 0.05
LINC00399-201ENST00000439008 SMARCA1P28370 1054 aa15.39■□□□□ 0.05
LINC00399-201ENST00000439008 HOXA13P31271 388 aaPredicted RBP15.39■□□□□ 0.05
LINC00399-201ENST00000439008 TOB2Q14106 344 aaPredicted RBP15.39■□□□□ 0.05
LINC00399-201ENST00000439008 LRRC26Q2I0M4 334 aa15.39■□□□□ 0.05
LINC00399-201ENST00000439008 CCSAPQ6IQ19 270 aaPredicted RBP15.39■□□□□ 0.05
LINC00399-201ENST00000439008 LARP6Q9BRS8 491 aaKnown RBP15.39■□□□□ 0.05
LINC00399-201ENST00000439008 UPF3BQ9BZI7 483 aaKnown RBP15.39■□□□□ 0.05
LINC00399-201ENST00000439008 XPNPEP3Q9NQH7 507 aa15.39■□□□□ 0.05
LINC00399-201ENST00000439008 FAM184BQ9ULE4 1060 aa15.39■□□□□ 0.05
LINC00399-201ENST00000439008 CNTNAP5Q8WYK1 1306 aa15.39■□□□□ 0.05
LINC00399-201ENST00000439008 H0YGN5 161 aa15.38■□□□□ 0.05
LINC00399-201ENST00000439008 DNM1LO00429 736 aa15.38■□□□□ 0.05
LINC00399-201ENST00000439008 CFBP00751 764 aa15.38■□□□□ 0.05
LINC00399-201ENST00000439008 MYCNP04198 464 aaPredicted RBP15.38■□□□□ 0.05
LINC00399-201ENST00000439008 CALM1P0DP23 149 aa15.38■□□□□ 0.05
LINC00399-201ENST00000439008 CALM2P0DP24 149 aa15.38■□□□□ 0.05
LINC00399-201ENST00000439008 CALM3P0DP25 149 aa15.38■□□□□ 0.05
LINC00399-201ENST00000439008 RARBP10826 455 aa15.38■□□□□ 0.05
LINC00399-201ENST00000439008 SMPD1P17405 629 aa15.38■□□□□ 0.05
LINC00399-201ENST00000439008 KIF5BP33176 963 aa15.38■□□□□ 0.05
LINC00399-201ENST00000439008 FBXL16Q8N461 479 aa15.38■□□□□ 0.05
LINC00399-201ENST00000439008 KLHDC9Q8NEP7 349 aa15.38■□□□□ 0.05
LINC00399-201ENST00000439008 SENP6Q9GZR1 1112 aaPredicted RBP15.38■□□□□ 0.05
LINC00399-201ENST00000439008 GNEQ9Y223 722 aaKnown RBP15.38■□□□□ 0.05
LINC00399-201ENST00000439008 KIAA1217Q5T5P2 1943 aa15.38■□□□□ 0.05
LINC00399-201ENST00000439008 ZBTB43O43298 467 aa15.37■□□□□ 0.05
LINC00399-201ENST00000439008 DUSP11O75319 330 aaKnown RBP15.37■□□□□ 0.05
LINC00399-201ENST00000439008 ADD1P35611 737 aaKnown RBP15.37■□□□□ 0.05
LINC00399-201ENST00000439008 C8orf34Q49A92 452 aa15.37■□□□□ 0.05
LINC00399-201ENST00000439008 RUFY3Q7L099 469 aa15.37■□□□□ 0.05
LINC00399-201ENST00000439008 DNERQ8NFT8 737 aa15.37■□□□□ 0.05
LINC00399-201ENST00000439008 IL31RAQ8NI17 732 aa15.37■□□□□ 0.05
LINC00399-201ENST00000439008 DPF3Q92784 378 aa15.37■□□□□ 0.05
LINC00399-201ENST00000439008 FERMT2Q96AC1 680 aa15.37■□□□□ 0.05
LINC00399-201ENST00000439008 RRP36Q96EU6 259 aaKnown RBP15.37■□□□□ 0.05
LINC00399-201ENST00000439008 LZTS2Q9BRK4 669 aa15.37■□□□□ 0.05
LINC00399-201ENST00000439008 UPF3AQ9H1J1 476 aaKnown RBP15.37■□□□□ 0.05
LINC00399-201ENST00000439008 ADD3Q9UEY8 706 aaKnown RBP15.37■□□□□ 0.05
LINC00399-201ENST00000439008 RBM47A0AV96 593 aaKnown RBP15.36■□□□□ 0.05
LINC00399-201ENST00000439008 GOLGA8AA7E2F4 631 aa15.36■□□□□ 0.05
LINC00399-201ENST00000439008 GOLGA8BA8MQT2 603 aa15.36■□□□□ 0.05
LINC00399-201ENST00000439008 ARIH2O95376 493 aa15.36■□□□□ 0.05
LINC00399-201ENST00000439008 GNAQP50148 359 aa15.36■□□□□ 0.05
LINC00399-201ENST00000439008 ATN1P54259 1190 aaPredicted RBP15.36■□□□□ 0.05
LINC00399-201ENST00000439008 EVCP57679 992 aa15.36■□□□□ 0.05
LINC00399-201ENST00000439008 TNFAIP2Q03169 654 aa15.36■□□□□ 0.05
LINC00399-201ENST00000439008 RTN1Q16799 776 aa15.36■□□□□ 0.05
LINC00399-201ENST00000439008 TYW1BQ6NUM6 668 aa15.36■□□□□ 0.05
LINC00399-201ENST00000439008 MCF2L2Q86YR7 1114 aa15.36■□□□□ 0.05
LINC00399-201ENST00000439008 ARRDC4Q8NCT1 418 aa15.36■□□□□ 0.05
LINC00399-201ENST00000439008 GPKOWQ92917 476 aaPredicted RBP eCLIP15.36■□□□□ 0.05
LINC00399-201ENST00000439008 RMDN3Q96TC7 470 aa15.36■□□□□ 0.05
LINC00399-201ENST00000439008 HTATIP2Q9BUP3 242 aa15.36■□□□□ 0.05
LINC00399-201ENST00000439008 TM6SF1Q9BZW5 370 aa15.36■□□□□ 0.05
LINC00399-201ENST00000439008 VTA1Q9NP79 307 aa15.36■□□□□ 0.05
LINC00399-201ENST00000439008 PXMP2Q9NR77 195 aa15.36■□□□□ 0.05
LINC00399-201ENST00000439008 PHF24Q9UPV7 400 aa15.36■□□□□ 0.05
LINC00399-201ENST00000439008 LOC102724159A0A0B4J2E5 919 aa15.35■□□□□ 0.05
LINC00399-201ENST00000439008 MEIS2O14770 477 aa15.35■□□□□ 0.05
LINC00399-201ENST00000439008 ADAMTS3O15072 1205 aa15.35■□□□□ 0.05
LINC00399-201ENST00000439008 PPFIA3O75145 1194 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms