RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 CCSER1Q9C0I3 900 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 DISC1Q9NRI5 854 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 DACH1Q9UI36 760 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 FEM1BQ9UK73 627 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 GCFC2P16383 781 aaKnown RBP16.16■□□□□ 0.18
CALD1-207ENST00000430085 EPHX2P34913 555 aa16.16■□□□□ 0.18
CALD1-207ENST00000430085 TECP42680 631 aa16.16■□□□□ 0.18
CALD1-207ENST00000430085 KARSQ15046 597 aaKnown RBP16.16■□□□□ 0.18
CALD1-207ENST00000430085 ZNF784Q8NCA9 323 aaPredicted RBP16.16■□□□□ 0.18
CALD1-207ENST00000430085 ANO3Q9BYT9 981 aa16.16■□□□□ 0.18
CALD1-207ENST00000430085 TAF1DQ9H5J8 278 aaPredicted RBP16.16■□□□□ 0.18
CALD1-207ENST00000430085 PP2D1A8MPX8 630 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 SLC37A4O43826 429 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 TXKP42681 527 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 RRAGBQ5VZM2 374 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 PDXDC2PQ6P474 469 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 SAMD1Q6SPF0 538 aaPredicted RBP16.15■□□□□ 0.18
CALD1-207ENST00000430085 SPATA20Q8TB22 786 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 MTMR9Q96QG7 549 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 RAB34Q9BZG1 259 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 ADARB2Q9NS39 739 aaKnown RBP16.15■□□□□ 0.18
CALD1-207ENST00000430085 GGA3Q9NZ52 723 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 DDX25Q9UHL0 483 aaKnown RBP16.15■□□□□ 0.18
CALD1-207ENST00000430085 SPDYE3A6NKU9 549 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 MEIS2O14770 477 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 FOSP01100 380 aaPredicted RBP16.15■□□□□ 0.18
CALD1-207ENST00000430085 MORC3Q14149 939 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 CCDC174Q6PII3 467 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 SARM1Q6SZW1 724 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 CABP7Q86V35 215 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 MLKLQ8NB16 471 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 LPAR1Q92633 364 aa16.15■□□□□ 0.18
CALD1-207ENST00000430085 RANBP17Q9H2T7 1088 aaKnown RBP16.15■□□□□ 0.18
CALD1-207ENST00000430085 GOLGA6L6A8MZA4 724 aa16.14■□□□□ 0.17
CALD1-207ENST00000430085 ESPNB1AK53 854 aa16.14■□□□□ 0.17
CALD1-207ENST00000430085 IKBKBO14920 756 aa16.14■□□□□ 0.17
CALD1-207ENST00000430085 MARCH6O60337 910 aa16.14■□□□□ 0.17
CALD1-207ENST00000430085 USP11P51784 963 aa16.14■□□□□ 0.17
CALD1-207ENST00000430085 ZNF75DP51815 510 aa16.14■□□□□ 0.17
CALD1-207ENST00000430085 HIRAP54198 1017 aaPredicted RBP16.14■□□□□ 0.17
CALD1-207ENST00000430085 DPYDQ12882 1025 aa16.14■□□□□ 0.17
CALD1-207ENST00000430085 FAM43AQ8N2R8 423 aa16.14■□□□□ 0.17
CALD1-207ENST00000430085 GSDMAQ96QA5 445 aa16.14■□□□□ 0.17
CALD1-207ENST00000430085 KIAA1683Q9H0B3 1180 aa16.14■□□□□ 0.17
CALD1-207ENST00000430085 PPP2R3BQ9Y5P8 575 aa16.14■□□□□ 0.17
CALD1-207ENST00000430085 WDR46O15213 610 aaKnown RBP16.13■□□□□ 0.17
CALD1-207ENST00000430085 GTPBP6O43824 516 aaPredicted RBP16.13■□□□□ 0.17
CALD1-207ENST00000430085 EDIL3O43854 480 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 INPP5BP32019 993 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 FXR2P51116 673 aaKnown RBP eCLIP16.13■□□□□ 0.171e-6■■■■□ 22.7
CALD1-207ENST00000430085 MYL5Q02045 173 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 PLA2G4DQ86XP0 818 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 IGSF22Q8N9C0 903 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 STAMQ92783 540 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 BMP6P22004 513 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 EAPPQ56P03 285 aaPredicted RBP16.13■□□□□ 0.17
CALD1-207ENST00000430085 PRAMEF18Q5VWM3 479 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.13■□□□□ 0.17
CALD1-207ENST00000430085 ZSCAN30Q86W11 494 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 TEX2Q8IWB9 1127 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 DRC7Q8IY82 874 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 SCYL3Q8IZE3 742 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 CALML4Q96GE6 196 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 WRNIP1Q96S55 665 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 PICK1Q9NRD5 415 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 LRWD1Q9UFC0 647 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 MYH7BA7E2Y1 1941 aa16.13■□□□□ 0.17
CALD1-207ENST00000430085 POTEIP0CG38 1075 aa16.12■□□□□ 0.17
CALD1-207ENST00000430085 POTEJP0CG39 1038 aa16.12■□□□□ 0.17
CALD1-207ENST00000430085 TAL1P17542 331 aaPredicted RBP16.12■□□□□ 0.17
CALD1-207ENST00000430085 CASP1P29466 404 aa16.12■□□□□ 0.17
CALD1-207ENST00000430085 USP50Q70EL3 339 aaPredicted RBP16.12■□□□□ 0.17
CALD1-207ENST00000430085 SPC24Q8NBT2 197 aa16.12■□□□□ 0.17
CALD1-207ENST00000430085 PLIN2Q99541 437 aa16.12■□□□□ 0.17
CALD1-207ENST00000430085 CUEDC2Q9H467 287 aa16.12■□□□□ 0.17
CALD1-207ENST00000430085 AS3MTQ9HBK9 375 aa16.12■□□□□ 0.17
CALD1-207ENST00000430085 FBXO28Q9NVF7 368 aa16.12■□□□□ 0.17
CALD1-207ENST00000430085 MRPL11Q9Y3B7 192 aaKnown RBP16.12■□□□□ 0.17
CALD1-207ENST00000430085 DOCK1Q14185 1865 aa16.12■□□□□ 0.17
CALD1-207ENST00000430085 PIK3CDO00329 1044 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 MSNP26038 577 aaKnown RBP16.11■□□□□ 0.17
CALD1-207ENST00000430085 USP14P54578 494 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 ARHGAP4P98171 946 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 PDIA5Q14554 519 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 NCAPHQ15003 741 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 MOXD1Q6UVY6 613 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 SLF1Q9BQI6 1058 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 BLZF1Q9H2G9 400 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 TTC12Q9H892 705 aaPredicted RBP16.11■□□□□ 0.17
CALD1-207ENST00000430085 MAGEF1Q9HAY2 307 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 ZNF112Q9UJU3 913 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 KIF3CO14782 793 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 OPLAHO14841 1288 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 PLCG1P19174 1290 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 HOXA13P31271 388 aaPredicted RBP16.11■□□□□ 0.17
CALD1-207ENST00000430085 MTMR2Q13614 643 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 CUL4BQ13620 913 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 SUPT20HL1Q3ZLR7 823 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 NAALADL2Q58DX5 795 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 PNMA8AQ86V59 439 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms