RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 ZAP70P43403 619 aa12.02□□□□□ -0.49
ATG4B-211ENST00000429899 PKN1Q16512 942 aa12.02□□□□□ -0.49
ATG4B-211ENST00000429899 TRIM67Q6ZTA4 783 aa12.02□□□□□ -0.49
ATG4B-211ENST00000429899 NOL8Q76FK4 1167 aaKnown RBP12.02□□□□□ -0.49
ATG4B-211ENST00000429899 ARMCX2Q7L311 632 aa12.02□□□□□ -0.49
ATG4B-211ENST00000429899 ZNF467Q7Z7K2 595 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-211ENST00000429899 RNF135Q8IUD6 432 aa12.02□□□□□ -0.49
ATG4B-211ENST00000429899 DDX11Q96FC9 970 aa12.02□□□□□ -0.49
ATG4B-211ENST00000429899 ALDH8A1Q9H2A2 487 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-211ENST00000429899 TLR9Q9NR96 1032 aa12.02□□□□□ -0.49
ATG4B-211ENST00000429899 TRPC6Q9Y210 931 aa12.02□□□□□ -0.49
ATG4B-211ENST00000429899 GNEQ9Y223 722 aaKnown RBP12.02□□□□□ -0.49
ATG4B-211ENST00000429899 TPRP12270 2363 aaKnown RBP12.02□□□□□ -0.49
ATG4B-211ENST00000429899 DMXL1Q9Y485 3027 aa12.01□□□□□ -0.49
ATG4B-211ENST00000429899 CABYRO75952 493 aa12.01□□□□□ -0.49
ATG4B-211ENST00000429899 IFIT2P09913 472 aaKnown RBP12.01□□□□□ -0.49
ATG4B-211ENST00000429899 KCNJ6P48051 423 aa12.01□□□□□ -0.49
ATG4B-211ENST00000429899 VCPP55072 806 aaKnown RBP12.01□□□□□ -0.49
ATG4B-211ENST00000429899 FSCN1Q16658 493 aaKnown RBP12.01□□□□□ -0.49
ATG4B-211ENST00000429899 TMEM63BQ5T3F8 832 aa12.01□□□□□ -0.49
ATG4B-211ENST00000429899 TMEM179Q6ZVK1 233 aa12.01□□□□□ -0.49
ATG4B-211ENST00000429899 CCDC144CPQ8IYA2 1237 aa12.01□□□□□ -0.49
ATG4B-211ENST00000429899 FBXL6Q8N531 539 aa12.01□□□□□ -0.49
ATG4B-211ENST00000429899 TGS1Q96RS0 853 aaKnown RBP12.01□□□□□ -0.49
ATG4B-211ENST00000429899 DBNDD2Q9BQY9 259 aa12.01□□□□□ -0.49
ATG4B-211ENST00000429899 CCDC8Q9H0W5 538 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-211ENST00000429899 ECHDC1Q9NTX5 307 aa12.01□□□□□ -0.49
ATG4B-211ENST00000429899 PPP1R9AQ9ULJ8 1098 aa12.01□□□□□ -0.49
ATG4B-211ENST00000429899 GVINP1Q7Z2Y8 2422 aa12.01□□□□□ -0.49
ATG4B-211ENST00000429899 PRR23AA6NEV1 266 aa12□□□□□ -0.49
ATG4B-211ENST00000429899 POLR3DP05423 398 aaPredicted RBP12□□□□□ -0.49
ATG4B-211ENST00000429899 AKR1B1P15121 316 aa12□□□□□ -0.49
ATG4B-211ENST00000429899 ERVK-21P61565 698 aa12□□□□□ -0.49
ATG4B-211ENST00000429899 TNFAIP2Q03169 654 aa12□□□□□ -0.49
ATG4B-211ENST00000429899 TTC39AQ5SRH9 613 aa12□□□□□ -0.49
ATG4B-211ENST00000429899 SNRNP48Q6IEG0 339 aaKnown RBP12□□□□□ -0.49
ATG4B-211ENST00000429899 TLK2Q86UE8 772 aa12□□□□□ -0.49
ATG4B-211ENST00000429899 PPP1R13LQ8WUF5 828 aa12□□□□□ -0.49
ATG4B-211ENST00000429899 BCL11AQ9H165 835 aa12□□□□□ -0.49
ATG4B-211ENST00000429899 IRF2BPLQ9H1B7 796 aa12□□□□□ -0.49
ATG4B-211ENST00000429899 ARHGEF10LQ9HCE6 1279 aa12□□□□□ -0.49
ATG4B-211ENST00000429899 DDX49Q9Y6V7 483 aaKnown RBP12□□□□□ -0.49
ATG4B-211ENST00000429899 NCOR2Q9Y618 2525 aa12□□□□□ -0.49
ATG4B-211ENST00000429899 ZFHX4Q86UP3 3567 aa12□□□□□ -0.49
ATG4B-211ENST00000429899 ZNF292O60281 2723 aa12□□□□□ -0.49
ATG4B-211ENST00000429899 MYH7P12883 1935 aa11.99□□□□□ -0.49
ATG4B-211ENST00000429899 IQCF3P0C7M6 154 aa11.99□□□□□ -0.49
ATG4B-211ENST00000429899 CYP2D6P10635 497 aa11.99□□□□□ -0.49
ATG4B-211ENST00000429899 COPB2P35606 906 aa11.99□□□□□ -0.49
ATG4B-211ENST00000429899 SLC4A3P48751 1232 aa11.99□□□□□ -0.49
ATG4B-211ENST00000429899 DEFB103AP81534 67 aa11.99□□□□□ -0.49
ATG4B-211ENST00000429899 ICA1Q05084 483 aa11.99□□□□□ -0.49
ATG4B-211ENST00000429899 CLUL1Q15846 466 aa11.99□□□□□ -0.49
ATG4B-211ENST00000429899 FAM83BQ5T0W9 1011 aa11.99□□□□□ -0.49
ATG4B-211ENST00000429899 MAGEB6Q8N7X4 407 aa11.99□□□□□ -0.49
ATG4B-211ENST00000429899 GPATCH3Q96I76 525 aa11.99□□□□□ -0.49
ATG4B-211ENST00000429899 CNTNAP3BQ96NU0 1288 aa11.99□□□□□ -0.49
ATG4B-211ENST00000429899 POP1Q99575 1024 aaKnown RBP11.99□□□□□ -0.49
ATG4B-211ENST00000429899 CNTNAP3Q9BZ76 1288 aa11.99□□□□□ -0.49
ATG4B-211ENST00000429899 TNKSO95271 1327 aa11.99□□□□□ -0.49
ATG4B-211ENST00000429899 LINC01553A4QN01 128 aa11.98□□□□□ -0.49
ATG4B-211ENST00000429899 PROB1E7EW31 1015 aa11.98□□□□□ -0.49
ATG4B-211ENST00000429899 DYNC1LI2O43237 492 aaPredicted RBP11.98□□□□□ -0.49
ATG4B-211ENST00000429899 IDH1O75874 414 aaKnown RBP11.98□□□□□ -0.49
ATG4B-211ENST00000429899 SMPD1P17405 629 aa11.98□□□□□ -0.49
ATG4B-211ENST00000429899 SDSP20132 328 aa11.98□□□□□ -0.49
ATG4B-211ENST00000429899 RFC2P35250 354 aa11.98□□□□□ -0.49
ATG4B-211ENST00000429899 WDR5P61964 334 aaKnown RBP11.98□□□□□ -0.49
ATG4B-211ENST00000429899 CNTN2Q02246 1040 aa11.98□□□□□ -0.49
ATG4B-211ENST00000429899 PABPC5Q96DU9 382 aaKnown RBP11.98□□□□□ -0.49
ATG4B-211ENST00000429899 DYNLL2Q96FJ2 89 aa11.98□□□□□ -0.49
ATG4B-211ENST00000429899 RIOK1Q9BRS2 568 aaKnown RBP11.98□□□□□ -0.49
ATG4B-211ENST00000429899 FSD1Q9BTV5 496 aa11.98□□□□□ -0.49
ATG4B-211ENST00000429899 TEX13BQ9BXU2 312 aa11.98□□□□□ -0.49
ATG4B-211ENST00000429899 SEZ6LQ9BYH1 1024 aa11.98□□□□□ -0.49
ATG4B-211ENST00000429899 BACH2Q9BYV9 841 aa11.98□□□□□ -0.49
ATG4B-211ENST00000429899 CLDND1Q9NY35 253 aa11.98□□□□□ -0.49
ATG4B-211ENST00000429899 CHD6Q8TD26 2715 aa11.97□□□□□ -0.49
ATG4B-211ENST00000429899 KDM4AO75164 1064 aa11.97□□□□□ -0.49
ATG4B-211ENST00000429899 BAIAP3O94812 1187 aa11.97□□□□□ -0.49
ATG4B-211ENST00000429899 SUPT20HL2P0C7V6 817 aa11.97□□□□□ -0.49
ATG4B-211ENST00000429899 EEF2P13639 858 aaKnown RBP11.97□□□□□ -0.49
ATG4B-211ENST00000429899 ATP5JP18859 108 aa11.97□□□□□ -0.49
ATG4B-211ENST00000429899 TCEAL5Q5H9L2 206 aa11.97□□□□□ -0.49
ATG4B-211ENST00000429899 FAM117BQ6P1L5 589 aa11.97□□□□□ -0.49
ATG4B-211ENST00000429899 FBXO22Q8NEZ5 403 aa11.97□□□□□ -0.49
ATG4B-211ENST00000429899 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.97□□□□□ -0.49
ATG4B-211ENST00000429899 MRPL38Q96DV4 380 aaKnown RBP11.97□□□□□ -0.49
ATG4B-211ENST00000429899 NUP88Q99567 741 aaPredicted RBP11.97□□□□□ -0.49
ATG4B-211ENST00000429899 C17orf80Q9BSJ5 609 aa11.97□□□□□ -0.49
ATG4B-211ENST00000429899 AP5M1Q9H0R1 490 aa11.97□□□□□ -0.49
ATG4B-211ENST00000429899 PDGFCQ9NRA1 345 aa11.97□□□□□ -0.49
ATG4B-211ENST00000429899 MCM9Q9NXL9 1143 aa11.97□□□□□ -0.49
ATG4B-211ENST00000429899 MYH7BA7E2Y1 1941 aa11.96□□□□□ -0.49
ATG4B-211ENST00000429899 ZEB2O60315 1214 aa11.96□□□□□ -0.49
ATG4B-211ENST00000429899 AVPR2P30518 371 aa11.96□□□□□ -0.49
ATG4B-211ENST00000429899 ZXDAP98168 799 aa11.96□□□□□ -0.49
ATG4B-211ENST00000429899 GPNMBQ14956 572 aa11.96□□□□□ -0.49
ATG4B-211ENST00000429899 SMAD2Q15796 467 aaKnown RBP11.96□□□□□ -0.49
ATG4B-211ENST00000429899 TCTN1Q2MV58 587 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms