RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 ZSCAN18Q8TBC5 510 aaPredicted RBP3.71□□□□□ -1.82
PTPRC-208ENST00000427110 EPB41L4AQ9HCS5 686 aaPredicted RBP3.71□□□□□ -1.82
PTPRC-208ENST00000427110 GPRC5CQ9NQ84 441 aa3.71□□□□□ -1.82
PTPRC-208ENST00000427110 ST7Q9NRC1 585 aa3.71□□□□□ -1.82
PTPRC-208ENST00000427110 GULP1Q9UBP9 304 aa3.71□□□□□ -1.82
PTPRC-208ENST00000427110 AKT3Q9Y243 479 aa3.71□□□□□ -1.82
PTPRC-208ENST00000427110 DIS3Q9Y2L1 958 aaKnown RBP3.71□□□□□ -1.82
PTPRC-208ENST00000427110 RWDD3Q9Y3V2 267 aa3.71□□□□□ -1.82
PTPRC-208ENST00000427110 KCTD3Q9Y597 815 aa3.71□□□□□ -1.82
PTPRC-208ENST00000427110 A0A1W2PQJ5 194 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 ZC3H12DA2A288 527 aaKnown RBP3.7□□□□□ -1.82
PTPRC-208ENST00000427110 ANKRD34BA5PLL1 514 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 C2orf71A6NGG8 1288 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 PPP1R11O60927 126 aaPredicted RBP3.7□□□□□ -1.82
PTPRC-208ENST00000427110 DDAH1O94760 285 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 TBC1D8O95759 1140 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 DBHP09172 617 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 L1CAMP32004 1257 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 LIMS1P48059 325 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 FXNQ16595 210 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 VMACQ2NL98 169 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 FBLN7Q53RD9 439 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 EEF1DP3Q658K8 133 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 MRM1Q6IN84 353 aaKnown RBP3.7□□□□□ -1.82
PTPRC-208ENST00000427110 RCSD1Q6JBY9 416 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 DPH6Q7L8W6 267 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 MZB1Q8WU39 189 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 LNPKQ9C0E8 428 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 OSBPL2Q9H1P3 480 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 PDLIM7Q9NR12 457 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 CLEC1BQ9P126 229 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 BACE2Q9Y5Z0 518 aa3.7□□□□□ -1.82
PTPRC-208ENST00000427110 NPHP3-ACAD11A0A0J9YXS1 232 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 F8W031 263 aaPredicted RBP3.69□□□□□ -1.82
PTPRC-208ENST00000427110 PLS3P13797 630 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 RBL2Q08999 1139 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 SCRN1Q12765 414 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 RAB33AQ14088 237 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 NBPF6Q5VWK0 638 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 GTF2IRD2BQ6EKJ0 949 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 GTF2IRD2Q86UP8 949 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 LDHDQ86WU2 507 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 IGDCC3Q8IVU1 814 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 FAM178BQ8IXR5 827 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 TMEFF1Q8IYR6 380 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 BVESQ8NE79 360 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 RCC1LQ96I51 464 aaKnown RBP3.69□□□□□ -1.82
PTPRC-208ENST00000427110 SIGLEC10Q96LC7 697 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 NBPF4Q96M43 638 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 APBA2Q99767 749 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 ZSWIM4Q9H7M6 989 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 BTG4Q9NY30 223 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 EMC9Q9Y3B6 208 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 IRAK3Q9Y616 596 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 ADAMTS20P59510 1910 aa3.69□□□□□ -1.82
PTPRC-208ENST00000427110 HRKO00198 91 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 N4BP3O15049 544 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 KLF4O43474 513 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 BUB1BO60566 1050 aaPredicted RBP3.68□□□□□ -1.82
PTPRC-208ENST00000427110 THBDP07204 575 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 MC3RP41968 323 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 PRR5P85299 388 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 CYP4F3Q08477 520 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 GRB10Q13322 594 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 BMS1Q14692 1282 aaKnown RBP3.68□□□□□ -1.82
PTPRC-208ENST00000427110 NCAPHQ15003 741 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 SF1Q15637 639 aaKnown RBP3.68□□□□□ -1.82
PTPRC-208ENST00000427110 DDR2Q16832 855 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 INF2Q27J81 1249 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 PRSS53Q2L4Q9 553 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 CCDC144BQ3MJ40 725 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 SV2CQ496J9 727 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 ZC3H14Q6PJT7 736 aaKnown RBP3.68□□□□□ -1.82
PTPRC-208ENST00000427110 TRIM59Q8IWR1 403 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 LZTR1Q8N653 840 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 CELF2-AS1Q8N7Q2 184 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 BTN2A2Q8WVV5 523 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 SRPK1Q96SB4 655 aaKnown RBP3.68□□□□□ -1.82
PTPRC-208ENST00000427110 DBR1Q9UK59 544 aaKnown RBP3.68□□□□□ -1.82
PTPRC-208ENST00000427110 SIT1Q9Y3P8 196 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 PCDHA5Q9Y5H7 936 aa3.68□□□□□ -1.82
PTPRC-208ENST00000427110 C7orf72A4D263 438 aa3.67□□□□□ -1.82
PTPRC-208ENST00000427110 NOP56O00567 594 aaKnown RBP3.67□□□□□ -1.82
PTPRC-208ENST00000427110 ABLIM1O14639 778 aa3.67□□□□□ -1.82
PTPRC-208ENST00000427110 IRS4O14654 1257 aaPredicted RBP3.67□□□□□ -1.82
PTPRC-208ENST00000427110 SUSD5O60279 629 aa3.67□□□□□ -1.82
PTPRC-208ENST00000427110 GJB6O95452 261 aa3.67□□□□□ -1.82
PTPRC-208ENST00000427110 CYBBP04839 570 aa3.67□□□□□ -1.82
PTPRC-208ENST00000427110 ITGAVP06756 1048 aa3.67□□□□□ -1.82
PTPRC-208ENST00000427110 INHBBP09529 407 aa3.67□□□□□ -1.82
PTPRC-208ENST00000427110 GLI4P10075 376 aa3.67□□□□□ -1.82
PTPRC-208ENST00000427110 BMP7P18075 431 aa3.67□□□□□ -1.82
PTPRC-208ENST00000427110 PAMP19021 973 aa3.67□□□□□ -1.82
PTPRC-208ENST00000427110 ECI1P42126 302 aa3.67□□□□□ -1.82
PTPRC-208ENST00000427110 MAPKAPK2P49137 400 aa3.67□□□□□ -1.82
PTPRC-208ENST00000427110 CBX2Q14781 532 aaPredicted RBP3.67□□□□□ -1.82
PTPRC-208ENST00000427110 NFE2L2Q16236 605 aa3.67□□□□□ -1.82
PTPRC-208ENST00000427110 ZNF385BQ569K4 471 aa3.67□□□□□ -1.82
PTPRC-208ENST00000427110 OLFML2BQ68BL8 750 aa3.67□□□□□ -1.82
PTPRC-208ENST00000427110 PAQR3Q6TCH7 311 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms