RNA–Protein interactions for RNA: ENST00000422254.5

HDAC7-207, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-207ENST00000422254 SNHG28P0DPA3 235 aa18.42■□□□□ 0.54
HDAC7-207ENST00000422254 PCP11498 1178 aaKnown RBP18.42■□□□□ 0.54
HDAC7-207ENST00000422254 AKNAD1Q5T1N1 836 aa18.42■□□□□ 0.54
HDAC7-207ENST00000422254 CXCL17Q6UXB2 119 aa18.42■□□□□ 0.54
HDAC7-207ENST00000422254 NSMFQ6X4W1 530 aa18.42■□□□□ 0.54
HDAC7-207ENST00000422254 C16orf59Q7L2K0 433 aa18.42■□□□□ 0.54
HDAC7-207ENST00000422254 FBXO16Q8IX29 292 aaPredicted RBP18.42■□□□□ 0.54
HDAC7-207ENST00000422254 CLEC4DQ8WXI8 215 aa18.42■□□□□ 0.54
HDAC7-207ENST00000422254 TTC14Q96N46 770 aa18.42■□□□□ 0.54
HDAC7-207ENST00000422254 GRIN2DO15399 1336 aa18.42■□□□□ 0.54
HDAC7-207ENST00000422254 BAATQ14032 418 aaPredicted RBP18.41■□□□□ 0.54
HDAC7-207ENST00000422254 RABEP1Q15276 862 aa18.41■□□□□ 0.54
HDAC7-207ENST00000422254 FSCN1Q16658 493 aaKnown RBP18.41■□□□□ 0.54
HDAC7-207ENST00000422254 IQSEC1Q6DN90 963 aa18.41■□□□□ 0.54
HDAC7-207ENST00000422254 EEPD1Q7L9B9 569 aa18.41■□□□□ 0.54
HDAC7-207ENST00000422254 SNX21Q969T3 373 aa18.41■□□□□ 0.54
HDAC7-207ENST00000422254 VTI1AQ96AJ9 217 aa18.41■□□□□ 0.54
HDAC7-207ENST00000422254 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.41■□□□□ 0.54
HDAC7-207ENST00000422254 VTA1Q9NP79 307 aa18.41■□□□□ 0.54
HDAC7-207ENST00000422254 GPCPD1Q9NPB8 672 aa18.41■□□□□ 0.54
HDAC7-207ENST00000422254 Q9Y3F1 56 aa18.41■□□□□ 0.54
HDAC7-207ENST00000422254 LAMA4Q16363 1823 aa18.4■□□□□ 0.54
HDAC7-207ENST00000422254 TMEM265A0A087WTH1 108 aa18.4■□□□□ 0.54
HDAC7-207ENST00000422254 DYNC1LI2O43237 492 aaPredicted RBP18.4■□□□□ 0.54
HDAC7-207ENST00000422254 ALDH5A1P51649 535 aaPredicted RBP18.4■□□□□ 0.54
HDAC7-207ENST00000422254 ZNF543Q08ER8 600 aa18.4■□□□□ 0.54
HDAC7-207ENST00000422254 RASIP1Q5U651 963 aa18.4■□□□□ 0.54
HDAC7-207ENST00000422254 NOL8Q76FK4 1167 aaKnown RBP18.4■□□□□ 0.54
HDAC7-207ENST00000422254 LOC102724159A0A0B4J2E5 919 aa18.39■□□□□ 0.53
HDAC7-207ENST00000422254 CABYRO75952 493 aa18.39■□□□□ 0.53
HDAC7-207ENST00000422254 PPIGQ13427 754 aaKnown RBP eCLIP18.39■□□□□ 0.53
HDAC7-207ENST00000422254 PWP2Q15269 919 aaKnown RBP18.39■□□□□ 0.53
HDAC7-207ENST00000422254 TMEM240Q5SV17 173 aa18.39■□□□□ 0.53
HDAC7-207ENST00000422254 SLC30A10Q6XR72 485 aa18.39■□□□□ 0.53
HDAC7-207ENST00000422254 MFSD6Q6ZSS7 791 aa18.39■□□□□ 0.53
HDAC7-207ENST00000422254 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.39■□□□□ 0.53
HDAC7-207ENST00000422254 MYLIPQ8WY64 445 aa18.39■□□□□ 0.53
HDAC7-207ENST00000422254 AP5M1Q9H0R1 490 aa18.39■□□□□ 0.53
HDAC7-207ENST00000422254 NEDD4P46934 1319 aa18.39■□□□□ 0.53
HDAC7-207ENST00000422254 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.38■□□□□ 0.53
HDAC7-207ENST00000422254 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.38■□□□□ 0.53
HDAC7-207ENST00000422254 TLR3O15455 904 aaKnown RBP18.38■□□□□ 0.53
HDAC7-207ENST00000422254 CSF2RAP15509 400 aa18.38■□□□□ 0.53
HDAC7-207ENST00000422254 ITGA7Q13683 1181 aa18.38■□□□□ 0.53
HDAC7-207ENST00000422254 PPP1R12CQ9BZL4 782 aa18.38■□□□□ 0.53
HDAC7-207ENST00000422254 ADD3Q9UEY8 706 aaKnown RBP18.38■□□□□ 0.53
HDAC7-207ENST00000422254 WDR19Q8NEZ3 1342 aa18.38■□□□□ 0.53
HDAC7-207ENST00000422254 CDH23Q9H251 3354 aa18.38■□□□□ 0.53
HDAC7-207ENST00000422254 RBM47A0AV96 593 aaKnown RBP18.37■□□□□ 0.53
HDAC7-207ENST00000422254 DUSP28Q4G0W2 176 aa18.37■□□□□ 0.53
HDAC7-207ENST00000422254 TMEM199Q8N511 208 aa18.37■□□□□ 0.53
HDAC7-207ENST00000422254 RNF41Q9H4P4 317 aaPredicted RBP18.37■□□□□ 0.53
HDAC7-207ENST00000422254 PNMA2Q9UL42 364 aa18.37■□□□□ 0.53
HDAC7-207ENST00000422254 ZEB2O60315 1214 aa18.36■□□□□ 0.53
HDAC7-207ENST00000422254 EDNRBP24530 442 aa18.36■□□□□ 0.53
HDAC7-207ENST00000422254 DNAJB2P25686 324 aa18.36■□□□□ 0.53
HDAC7-207ENST00000422254 CYP2C18P33260 490 aa18.36■□□□□ 0.53
HDAC7-207ENST00000422254 MCM2P49736 904 aa18.36■□□□□ 0.53
HDAC7-207ENST00000422254 UMODL1Q5DID0 1318 aa18.36■□□□□ 0.53
HDAC7-207ENST00000422254 RNF207Q6ZRF8 634 aa18.36■□□□□ 0.53
HDAC7-207ENST00000422254 DGKHQ86XP1 1220 aa18.36■□□□□ 0.53
HDAC7-207ENST00000422254 MAFAQ8NHW3 353 aaPredicted RBP18.36■□□□□ 0.53
HDAC7-207ENST00000422254 ESR2Q92731 530 aa18.36■□□□□ 0.53
HDAC7-207ENST00000422254 ZKSCAN3Q9BRR0 538 aa18.36■□□□□ 0.53
HDAC7-207ENST00000422254 SEZ6LQ9BYH1 1024 aa18.36■□□□□ 0.53
HDAC7-207ENST00000422254 ANO2Q9NQ90 1003 aa18.36■□□□□ 0.53
HDAC7-207ENST00000422254 A0A0C4DFX4 3053 aa18.35■□□□□ 0.53
HDAC7-207ENST00000422254 PTPDC1A2A3K4 754 aa18.35■□□□□ 0.53
HDAC7-207ENST00000422254 ZNF213O14771 459 aa18.35■□□□□ 0.53
HDAC7-207ENST00000422254 B4GALT4O60513 344 aa18.35■□□□□ 0.53
HDAC7-207ENST00000422254 ACRP10323 421 aa18.35■□□□□ 0.53
HDAC7-207ENST00000422254 CALML3P27482 149 aa18.35■□□□□ 0.53
HDAC7-207ENST00000422254 NT5C2P49902 561 aa18.35■□□□□ 0.53
HDAC7-207ENST00000422254 PSMC6P62333 389 aa18.35■□□□□ 0.53
HDAC7-207ENST00000422254 RPS6P62753 249 aaKnown RBP18.35■□□□□ 0.53
HDAC7-207ENST00000422254 RNF20Q5VTR2 975 aa18.35■□□□□ 0.53
HDAC7-207ENST00000422254 CWC27Q6UX04 472 aaKnown RBP18.35■□□□□ 0.53
HDAC7-207ENST00000422254 ZNF365Q70YC5 407 aa18.35■□□□□ 0.53
HDAC7-207ENST00000422254 ANKS1AQ92625 1134 aa18.35■□□□□ 0.53
HDAC7-207ENST00000422254 COL25A1Q9BXS0 654 aaPredicted RBP18.35■□□□□ 0.53
HDAC7-207ENST00000422254 WDR11Q9BZH6 1224 aa18.35■□□□□ 0.53
HDAC7-207ENST00000422254 UNC80Q8N2C7 3258 aa18.34■□□□□ 0.53
HDAC7-207ENST00000422254 GOLGA8HP0CJ92 632 aa18.34■□□□□ 0.53
HDAC7-207ENST00000422254 HSPA4P34932 840 aa18.34■□□□□ 0.53
HDAC7-207ENST00000422254 GRIN2CQ14957 1233 aa18.34■□□□□ 0.53
HDAC7-207ENST00000422254 GPATCH4Q5T3I0 446 aaKnown RBP18.34■□□□□ 0.53
HDAC7-207ENST00000422254 PSRC1Q6PGN9 363 aaPredicted RBP18.34■□□□□ 0.53
HDAC7-207ENST00000422254 KCNB2Q92953 911 aa18.34■□□□□ 0.53
HDAC7-207ENST00000422254 NOC4LQ9BVI4 516 aaKnown RBP18.34■□□□□ 0.53
HDAC7-207ENST00000422254 TRPV6Q9H1D0 765 aa18.34■□□□□ 0.53
HDAC7-207ENST00000422254 CPVLQ9H3G5 476 aa18.34■□□□□ 0.53
HDAC7-207ENST00000422254 HIPK3Q9H422 1215 aa18.34■□□□□ 0.53
HDAC7-207ENST00000422254 IL23AQ9NPF7 189 aa18.34■□□□□ 0.53
HDAC7-207ENST00000422254 SCN10AQ9Y5Y9 1956 aa18.33■□□□□ 0.53
HDAC7-207ENST00000422254 GRXCR1A8MXD5 290 aa18.33■□□□□ 0.52
HDAC7-207ENST00000422254 ST18O60284 1047 aa18.33■□□□□ 0.52
HDAC7-207ENST00000422254 KDM4AO75164 1064 aa18.33■□□□□ 0.52
HDAC7-207ENST00000422254 FOSL2P15408 326 aa18.33■□□□□ 0.52
HDAC7-207ENST00000422254 PBX2P40425 430 aa18.33■□□□□ 0.52
HDAC7-207ENST00000422254 RGS22Q8NE09 1264 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms