RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 NUTM2BA6NNL0 878 aaPredicted RBP18.62■□□□□ 0.57
LIMS2-208ENST00000410011 NUTM2EB1AL46 878 aaPredicted RBP18.62■□□□□ 0.57
LIMS2-208ENST00000410011 PRLRP16471 622 aa18.62■□□□□ 0.57
LIMS2-208ENST00000410011 VAV2P52735 878 aa18.62■□□□□ 0.57
LIMS2-208ENST00000410011 FKBP15Q5T1M5 1219 aa18.62■□□□□ 0.57
LIMS2-208ENST00000410011 C16orf86Q6ZW13 317 aa18.62■□□□□ 0.57
LIMS2-208ENST00000410011 MMS19Q96T76 1030 aa18.62■□□□□ 0.57
LIMS2-208ENST00000410011 NOC4LQ9BVI4 516 aaKnown RBP18.62■□□□□ 0.57
LIMS2-208ENST00000410011 TSPYL1Q9H0U9 437 aa18.62■□□□□ 0.57
LIMS2-208ENST00000410011 VPS18Q9P253 973 aa18.62■□□□□ 0.57
LIMS2-208ENST00000410011 MYH1P12882 1939 aa18.62■□□□□ 0.57
LIMS2-208ENST00000410011 SMCO2A6NFE2 343 aa18.62■□□□□ 0.57
LIMS2-208ENST00000410011 CCNT1O60563 726 aaKnown RBP18.62■□□□□ 0.57
LIMS2-208ENST00000410011 NAPAP54920 295 aa18.62■□□□□ 0.57
LIMS2-208ENST00000410011 FNBP4Q8N3X1 1017 aaPredicted RBP18.62■□□□□ 0.57
LIMS2-208ENST00000410011 RUBCNQ92622 972 aa18.62■□□□□ 0.57
LIMS2-208ENST00000410011 MMTAG2Q9BU76 263 aaKnown RBP18.62■□□□□ 0.57
LIMS2-208ENST00000410011 STK17AQ9UEE5 414 aa18.62■□□□□ 0.57
LIMS2-208ENST00000410011 STX8Q9UNK0 236 aa18.62■□□□□ 0.57
LIMS2-208ENST00000410011 LRRIQ3A6PVS8 624 aaPredicted RBP18.61■□□□□ 0.57
LIMS2-208ENST00000410011 ENC1O14682 589 aa18.61■□□□□ 0.57
LIMS2-208ENST00000410011 LCA5LO95447 670 aa18.61■□□□□ 0.57
LIMS2-208ENST00000410011 MTIF2P46199 727 aaKnown RBP18.61■□□□□ 0.57
LIMS2-208ENST00000410011 LMAN1P49257 510 aa18.61■□□□□ 0.57
LIMS2-208ENST00000410011 ASIC1P78348 528 aa18.61■□□□□ 0.57
LIMS2-208ENST00000410011 IQCEQ6IPM2 695 aa18.61■□□□□ 0.57
LIMS2-208ENST00000410011 ARHGAP27Q6ZUM4 889 aa18.61■□□□□ 0.57
LIMS2-208ENST00000410011 ZNF572Q7Z3I7 529 aaPredicted RBP18.61■□□□□ 0.57
LIMS2-208ENST00000410011 RRP36Q96EU6 259 aaKnown RBP18.61■□□□□ 0.57
LIMS2-208ENST00000410011 CALML4Q96GE6 196 aa18.61■□□□□ 0.57
LIMS2-208ENST00000410011 PLIN2Q99541 437 aa18.61■□□□□ 0.57
LIMS2-208ENST00000410011 LACRTQ9GZZ8 138 aa18.61■□□□□ 0.57
LIMS2-208ENST00000410011 HDAC6Q9UBN7 1215 aa18.61■□□□□ 0.57
LIMS2-208ENST00000410011 ZPR1O75312 459 aa18.61■□□□□ 0.57
LIMS2-208ENST00000410011 FGFR1OPO95684 399 aaKnown RBP18.61■□□□□ 0.57
LIMS2-208ENST00000410011 GYS2P54840 703 aa18.61■□□□□ 0.57
LIMS2-208ENST00000410011 KIF5AQ12840 1032 aa18.61■□□□□ 0.57
LIMS2-208ENST00000410011 LETM2Q2VYF4 491 aa18.61■□□□□ 0.57
LIMS2-208ENST00000410011 TGFBRAP1Q8WUH2 860 aa18.61■□□□□ 0.57
LIMS2-208ENST00000410011 RCCD1A6NED2 376 aa18.6■□□□□ 0.57
LIMS2-208ENST00000410011 FXR2P51116 673 aaKnown RBP eCLIP18.6■□□□□ 0.57
LIMS2-208ENST00000410011 TRIM58Q8NG06 486 aa18.6■□□□□ 0.57
LIMS2-208ENST00000410011 MTMR9Q96QG7 549 aa18.6■□□□□ 0.57
LIMS2-208ENST00000410011 RTFDC1Q9BY42 306 aaPredicted RBP18.6■□□□□ 0.57
LIMS2-208ENST00000410011 JRKLQ9Y4A0 524 aa18.6■□□□□ 0.57
LIMS2-208ENST00000410011 NAV1Q8NEY1 1877 aa18.6■□□□□ 0.57
LIMS2-208ENST00000410011 SOGA3Q5TF21 947 aa18.6■□□□□ 0.57
LIMS2-208ENST00000410011 UNC13DQ70J99 1090 aa18.6■□□□□ 0.57
LIMS2-208ENST00000410011 SV2BQ7L1I2 683 aa18.6■□□□□ 0.57
LIMS2-208ENST00000410011 ZNF804AQ7Z570 1209 aa18.6■□□□□ 0.57
LIMS2-208ENST00000410011 CCDC84Q86UT8 332 aaPredicted RBP18.6■□□□□ 0.57
LIMS2-208ENST00000410011 KIAA0895Q8NCT3 520 aa18.6■□□□□ 0.57
LIMS2-208ENST00000410011 EDEM3Q9BZQ6 932 aa18.6■□□□□ 0.57
LIMS2-208ENST00000410011 FAN1Q9Y2M0 1017 aa18.6■□□□□ 0.57
LIMS2-208ENST00000410011 GPR75-ASB3A0A0A6YYF3 556 aa18.59■□□□□ 0.57
LIMS2-208ENST00000410011 USO1O60763 962 aaKnown RBP18.59■□□□□ 0.57
LIMS2-208ENST00000410011 N4BP1O75113 896 aaKnown RBP18.59■□□□□ 0.57
LIMS2-208ENST00000410011 IVLP07476 585 aa18.59■□□□□ 0.57
LIMS2-208ENST00000410011 CDK8P49336 464 aa18.59■□□□□ 0.57
LIMS2-208ENST00000410011 PDIA5Q14554 519 aa18.59■□□□□ 0.57
LIMS2-208ENST00000410011 SPA17Q15506 151 aa18.59■□□□□ 0.57
LIMS2-208ENST00000410011 GUF1Q8N442 669 aaKnown RBP18.59■□□□□ 0.57
LIMS2-208ENST00000410011 CCDC42Q96M95 316 aa18.59■□□□□ 0.57
LIMS2-208ENST00000410011 EYA3Q99504 573 aa18.59■□□□□ 0.57
LIMS2-208ENST00000410011 SEMA6BQ9H3T3 888 aa18.59■□□□□ 0.57
LIMS2-208ENST00000410011 RIOX1Q9H6W3 641 aa18.59■□□□□ 0.57
LIMS2-208ENST00000410011 SEC63Q9UGP8 760 aaKnown RBP18.59■□□□□ 0.57
LIMS2-208ENST00000410011 SIK3Q9Y2K2 1263 aa18.59■□□□□ 0.57
LIMS2-208ENST00000410011 SNED1Q8TER0 1413 aa18.59■□□□□ 0.57
LIMS2-208ENST00000410011 FCER1AP12319 257 aa18.58■□□□□ 0.57
LIMS2-208ENST00000410011 PLCG2P16885 1265 aa18.58■□□□□ 0.57
LIMS2-208ENST00000410011 TECP42680 631 aa18.58■□□□□ 0.57
LIMS2-208ENST00000410011 SLC20A2Q08357 652 aa18.58■□□□□ 0.57
LIMS2-208ENST00000410011 GRAPQ13588 217 aa18.58■□□□□ 0.57
LIMS2-208ENST00000410011 VWA3BQ502W6 1294 aa18.58■□□□□ 0.57
LIMS2-208ENST00000410011 SLC44A5Q8NCS7 719 aa18.58■□□□□ 0.57
LIMS2-208ENST00000410011 GRAPLQ8TC17 118 aaPredicted RBP18.58■□□□□ 0.57
LIMS2-208ENST00000410011 TBCKQ8TEA7 893 aa18.58■□□□□ 0.57
LIMS2-208ENST00000410011 SECISBP2LQ93073 1101 aaKnown RBP18.58■□□□□ 0.57
LIMS2-208ENST00000410011 FAM163AQ96GL9 167 aaPredicted RBP18.58■□□□□ 0.57
LIMS2-208ENST00000410011 LRRC27Q9C0I9 530 aa18.58■□□□□ 0.57
LIMS2-208ENST00000410011 LRRC63Q05C16 580 aa18.58■□□□□ 0.56
LIMS2-208ENST00000410011 RAD51AP2Q09MP3 1159 aa18.58■□□□□ 0.56
LIMS2-208ENST00000410011 SLC4A8Q2Y0W8 1093 aa18.58■□□□□ 0.56
LIMS2-208ENST00000410011 LEKR1Q6ZMV7 388 aa18.58■□□□□ 0.56
LIMS2-208ENST00000410011 MMGT1Q8N4V1 131 aa18.58■□□□□ 0.56
LIMS2-208ENST00000410011 COG1Q8WTW3 980 aa18.58■□□□□ 0.56
LIMS2-208ENST00000410011 SRP68Q9UHB9 627 aaKnown RBP18.58■□□□□ 0.56
LIMS2-208ENST00000410011 JAG2Q9Y219 1238 aa18.58■□□□□ 0.56
LIMS2-208ENST00000410011 GOLGA8HP0CJ92 632 aa18.57■□□□□ 0.56
LIMS2-208ENST00000410011 KLK7P49862 253 aa18.57■□□□□ 0.56
LIMS2-208ENST00000410011 IRX5P78411 483 aaPredicted RBP18.57■□□□□ 0.56
LIMS2-208ENST00000410011 PSMD2Q13200 908 aa18.57■□□□□ 0.56
LIMS2-208ENST00000410011 DIXDC1Q155Q3 683 aa18.57■□□□□ 0.56
LIMS2-208ENST00000410011 MAN2A1Q16706 1144 aa18.57■□□□□ 0.56
LIMS2-208ENST00000410011 CCNI2Q6ZMN8 369 aaPredicted RBP18.57■□□□□ 0.56
LIMS2-208ENST00000410011 REXO1Q8N1G1 1221 aaKnown RBP18.57■□□□□ 0.56
LIMS2-208ENST00000410011 CCDC102AQ96A19 550 aa18.57■□□□□ 0.56
LIMS2-208ENST00000410011 NDST4Q9H3R1 872 aa18.57■□□□□ 0.56
LIMS2-208ENST00000410011 BLOC1S4Q9NUP1 217 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms