RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 RTP1P59025 263 aa-0.35□□□□□ -2.47
MIR548F3-201ENST00000408509 NANOS2P60321 138 aaKnown RBP-0.35□□□□□ -2.47
MIR548F3-201ENST00000408509 TUBA4AP68366 448 aa-0.35□□□□□ -2.47
MIR548F3-201ENST00000408509 HOXA4Q00056 320 aaPredicted RBP-0.35□□□□□ -2.47
MIR548F3-201ENST00000408509 MAP2K5Q13163 448 aa-0.35□□□□□ -2.47
MIR548F3-201ENST00000408509 SLC1A5Q15758 541 aa-0.35□□□□□ -2.47
MIR548F3-201ENST00000408509 C15orf39Q6ZRI6 1047 aa-0.35□□□□□ -2.47
MIR548F3-201ENST00000408509 UBE3DQ7Z6J8 389 aa-0.35□□□□□ -2.47
MIR548F3-201ENST00000408509 LINC00482Q8N8I6 264 aa-0.35□□□□□ -2.47
MIR548F3-201ENST00000408509 FRS2Q8WU20 508 aa-0.35□□□□□ -2.47
MIR548F3-201ENST00000408509 SYT3Q9BQG1 590 aa-0.35□□□□□ -2.47
MIR548F3-201ENST00000408509 TMEM168Q9H0V1 697 aa-0.35□□□□□ -2.47
MIR548F3-201ENST00000408509 TSPAN10Q9H1Z9 355 aaPredicted RBP-0.35□□□□□ -2.47
MIR548F3-201ENST00000408509 TRIT1Q9H3H1 467 aaKnown RBP-0.35□□□□□ -2.47
MIR548F3-201ENST00000408509 CEP126Q9P2H0 1117 aa-0.35□□□□□ -2.47
MIR548F3-201ENST00000408509 DIS3Q9Y2L1 958 aaKnown RBP-0.35□□□□□ -2.47
MIR548F3-201ENST00000408509 PMLP29590 882 aa-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 KIR2DL1P43626 348 aaPredicted RBP-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 KIR2DL2P43627 348 aaPredicted RBP-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 PRR5P85299 388 aa-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 CRHR2Q13324 411 aa-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 SLC9A4Q6AI14 798 aa-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 POTEAQ6S8J7 498 aa-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 STK32CQ86UX6 486 aa-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 NAA40Q86UY6 237 aa-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 CXorf67Q86X51 503 aaPredicted RBP-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 SUPT20HQ8NEM7 779 aa-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 SEMA6DQ8NFY4 1073 aa-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 CTCFLQ8NI51 663 aaPredicted RBP-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 GORASP1Q9BQQ3 440 aa-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 C1QTNF5Q9BXJ0 243 aa-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 HMX1Q9NP08 348 aaPredicted RBP-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 DZANK1Q9NVP4 752 aa-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 GPATCH2Q9NW75 528 aa-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 SEMA5BQ9P283 1151 aa-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 KANSL3Q9P2N6 904 aa-0.36□□□□□ -2.47
MIR548F3-201ENST00000408509 SEMA3EO15041 775 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 PPP1R12BO60237 982 aaPredicted RBP-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 ABHD16AO95870 558 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 ALPLP05186 524 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 RASA1P20936 1047 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 EIF2B5Q13144 721 aaKnown RBP-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 KCNC3Q14003 757 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 ZNF268Q14587 947 aaPredicted RBP-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 CEP85LQ5SZL2 805 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 ZNF626Q68DY1 528 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 GALNT18Q6P9A2 607 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 KCNV1Q6PIU1 500 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 TSPYL5Q86VY4 417 aaPredicted RBP-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 SYNE4Q8N205 404 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 ZNF485Q8NCK3 441 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 NUP43Q8NFH3 380 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 GAS2L2Q8NHY3 880 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 NSMCE1Q8WV22 266 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 MAP6Q96JE9 813 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 HHIPL1Q96JK4 782 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 SLITRK1Q96PX8 696 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 OR14A2Q96R54 314 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 MIPEPQ99797 713 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 C11orf84Q9BUA3 381 aaPredicted RBP-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 ZC3H12CQ9C0D7 883 aaKnown RBP-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 DBR1Q9UK59 544 aaKnown RBP-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 TLK1Q9UKI8 766 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 GIT1Q9Y2X7 761 aa-0.37□□□□□ -2.47
MIR548F3-201ENST00000408509 KRTAP1-4P0C5Y4 121 aa-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 TYRP1P17643 537 aa-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 PTTG1IPP53801 180 aa-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 USP14P54578 494 aa-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 KRTAP12-4P60329 112 aa-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 UBAP2Q5T6F2 1119 aaKnown RBP-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 KIAA1614Q5VZ46 1190 aa-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 HIST2H2BDQ6DRA6 164 aa-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 ARMCX6Q7L4S7 300 aa-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 TRIM56Q9BRZ2 755 aaKnown RBP-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 EHMT1Q9H9B1 1298 aa-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 L2HGDHQ9H9P8 463 aa-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 KIAA1586Q9HCI6 787 aa-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 GJB4Q9NTQ9 266 aa-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 ELOVL5Q9NYP7 299 aa-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 KIAA1522Q9P206 1035 aaPredicted RBP-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 ZNF330Q9Y3S2 320 aaPredicted RBP-0.38□□□□□ -2.47
MIR548F3-201ENST00000408509 POLR2AP24928 1970 aaKnown RBP-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 F8W031 263 aaPredicted RBP-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 HNRNPA1P09651 372 aaKnown RBP eCLIP-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 CKBP12277 381 aa-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 ZNF10P21506 573 aaPredicted RBP-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 LTBRP36941 435 aa-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 TRIM25Q14258 630 aaKnown RBP-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 RRP1BQ14684 758 aaKnown RBP-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 TRIP4Q15650 581 aaPredicted RBP-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 HSF5Q4G112 596 aaPredicted RBP-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 ZNF585BQ52M93 769 aa-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 PRR31Q5SQ13 230 aa-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 WAPLQ7Z5K2 1190 aa-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 SGMS1Q86VZ5 419 aa-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 DEPDC4Q8N2C3 294 aa-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 KYQ8NBH2 561 aa-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 KREMEN2Q8NCW0 462 aa-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 RNF214Q8ND24 703 aa-0.39□□□□□ -2.47
MIR548F3-201ENST00000408509 RIN3Q8TB24 985 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms